Cucsa.164810 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.164810
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThioredoxin
Locationscaffold01153 : 176450 .. 177313 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCATATAATTTCTTTCTTCTCAAATACAAATCCCTTTTAATCTGCTCATTTTCCCCTTTGTCTTTTCTTTTTGTAAAGTATATTGCAATAATGAATGATATGGGGAAAGTAGTTTCATGCCACACAGTTCGTTCTTGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAATTGGTACTTTTTAATTTTTTtAATCATTTCTTTCAATTAATTTCCTCTCCTTTTGTCGTGGGTATATAACATTGTTTTCAACATTTCGATTTTCGTCGGTATTAGGTCGTCGTGAATTTTACCGCAACATGGTGTGCCCCGTGTCGTGGCATGGCTCCTGTTCTTGAAGATTTAGCGAATAAAATGAGTAATAATGTTACATTTTTGAAAGTGGACGTTGACGAACTCATGGTACTGTAAACCTGTCTTAATGATGACTATGTGAAACTTCTTTACTAGTTAAAGACAACCACATTATGACTGACTGTGTATATTATTTGTTTCTGTGTAGAGTGTTGCCAATGAGTACGGAGTGGGAGCCCTTCCCTCGTTTCAATTCTTCAAGAACGGAAAATTAGTGGACAAGTTCGTAGGAGCAAGGAAAGATGTTTTGCACAAAACTGTATCCAAACATGTTGCATGAAGCTATTTTTTTtGTTATTAAAAGTAATATGTGCACGCAGTCCAGACCATGTAGACATCTTCACATGCCTTCTGTATTCAGAAAGAAAAATATTATCAACAACTTGTACTGCTTATATATGTACTTGAGCTAAAAAAaTTATCACTTTACAACTTGTACTGCTTATGTACATGAGCTCGAGGATGTGTACCCAAAAATTTTCAGTTTATTAAATATTGCTGCAA

mRNA sequence

ATTTCATATAATTTCTTTCTTCTCAAATACAAATCCCTTTTAATCTGCTCATTTTCCCCTTTGTCTTTTCTTTTTGTAAAGTATATTGCAATAATGAATGATATGGGGAAAGTAGTTTCATGCCACACAGTTCGTTCTTGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAATTGGTCGTCGTGAATTTTACCGCAACATGGTGTGCCCCGTGTCGTGGCATGGCTCCTGTTCTTGAAGATTTAGCGAATAAAATGAGTAATAATGTTACATTTTTGAAAGTGGACGTTGACGAACTCATGAGTGTTGCCAATGAGTACGGAGTGGGAGCCCTTCCCTCGTTTCAATTCTTCAAGAACGGAAAATTAGTGGACAAGTTCGTAGGAGCAAGGAAAGATGTTTTGCACAAAACTGTATCCAAACATGTTGCATGAAGCTATTTTTTTTGTTATTAAAAGTAATATGTGCACGCAGTCCAGACCATGTAGACATCTTCACATGCCTTCTGTATTCAGAAAGAAAAATATTATCAACAACTTGTACTGCTTATATATGTACTTGAGCTAAAAAAATTATCACTTTACAACTTGTACTGCTTATGTACATGAGCTCGAGGATGTGTACCCAAAAATTTTCAGTTTATTAAATATTGCTGCAA

Coding sequence (CDS)

ATGAATGATATGGGGAAAGTAGTTTCATGCCACACAGTTCGTTCTTGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAATTGGTCGTCGTGAATTTTACCGCAACATGGTGTGCCCCGTGTCGTGGCATGGCTCCTGTTCTTGAAGATTTAGCGAATAAAATGAGTAATAATGTTACATTTTTGAAAGTGGACGTTGACGAACTCATGAGTGTTGCCAATGAGTACGGAGTGGGAGCCCTTCCCTCGTTTCAATTCTTCAAGAACGGAAAATTAGTGGACAAGTTCGTAGGAGCAAGGAAAGATGTTTTGCACAAAACTGTATCCAAACATGTTGCATGA

Protein sequence

MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA*
Homology
[Close]
BLAST of Cucsa.164810 vs. Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.0e-31
Identity = 61/113 (53.98%), Postives = 85/113 (75.22%), Query Frame = 1 

Query: 2   NDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVT 61
           ++ G+V++CHTV +W +QL KA +   LVVV+FTA+WC PCR +AP   DLA K+  NV 
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           FLKVD DEL SVA+++ + A+P+F F K GK++DK VGA+KD L  T++KH+A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Cucsa.164810 vs. Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-31
Identity = 61/110 (55.45%), Postives = 84/110 (76.36%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V+ CHTV +W +QL K      L+VV+FTA+WC PCR +AP L +LA K+  NVTFLK
Sbjct: 6   GQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLP-NVTFLK 65

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           VDVDEL +VA+E+ V ++P+F F K GK++DK VGA+KD L +T++KH+A
Sbjct: 66  VDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]
BLAST of Cucsa.164810 vs. Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-30
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V+ CH +  W  QL  AKQ NKL+V++FTA+WC PCR +APV  DLA K  ++  F K
Sbjct: 6   GQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFK 65

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
           VDVDEL +VA E+GV A+P+F   K+G +VDK VGARK+ LH T++KH
Sbjct: 66  VDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113

[Close]
BLAST of Cucsa.164810 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 4.3e-29
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V+ CHT   W  QL KAK+ NKL+V++FTA+WC PCR +AP+  DLA K  ++  F K
Sbjct: 6   GQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFK 65

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
           VDVDEL SVA E+GV A+P+F F K G++VDK VGA K+ L   + KH
Sbjct: 66  VDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]
BLAST of Cucsa.164810 vs. Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 59/114 (51.75%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M + G+V+  HTV +W + L K     KL+VV+FTA+WC PC+ +A    +LA KM   V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPT-V 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           TFLKVDVDEL SVA ++ V A+P+F F K GK+VDK VGA+KD L +T++KH++
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHIS 113

[Close]
BLAST of Cucsa.164810 vs. TrEMBL
Match: A0A0A0KSB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-58
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           TFLKVDVDELMSVA+EYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cucsa.164810 vs. TrEMBL
Match: A0A0A0KLS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-44
Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QCNKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]
BLAST of Cucsa.164810 vs. TrEMBL
Match: A0A0A0KLR8_CUCSA (Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-36
Identity = 78/112 (69.64%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M +MGKV+ CHT+ SW QQLLKA+Q NKL+VVNFTA WC PC  MA VLE+LA KM NNV
Sbjct: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
            FLKVD+DEL +VANE+ V ALPS+ F KNG+LV+KF GA+KDVL  TVSKH
Sbjct: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 111

[Close]
BLAST of Cucsa.164810 vs. TrEMBL
Match: A0A0A0LGF7_CUCSA (Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M +  +V++CHTV SWKQQLLK KQ +KL+VV+FTA WC PCR +APV  +LA KMS NV
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMS-NV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
            FLKVDVD+L +VA E+GV ALP F F KNGK+VD+FVGARKD L K VS H
Sbjct: 61  IFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHH 111

[Close]
BLAST of Cucsa.164810 vs. TrEMBL
Match: R0H8K4_9BRAS (Thioredoxin OS=Capsella rubella GN=CARUB_v10019026mg PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-30
Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 1 

Query: 2   NDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVT 61
           +D G+V++CHTV SW +QL KA     LVVV+FTATWC PCR +AP   DLA K+  NV 
Sbjct: 3   SDEGQVIACHTVESWNEQLQKANDSKTLVVVDFTATWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           FLKVD+DEL SVA+++ + A+P+F F K GK++DK VGA+KD L  T++KH+A
Sbjct: 63  FLKVDIDELKSVASDWAIEAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Cucsa.164810 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-32
Identity = 61/113 (53.98%), Postives = 85/113 (75.22%), Query Frame = 1 

Query: 2   NDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVT 61
           ++ G+V++CHTV +W +QL KA +   LVVV+FTA+WC PCR +AP   DLA K+  NV 
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           FLKVD DEL SVA+++ + A+P+F F K GK++DK VGA+KD L  T++KH+A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Cucsa.164810 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-30
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V+ CHT   W  QL KAK+ NKL+V++FTA+WC PCR +AP+  DLA K  ++  F K
Sbjct: 6   GQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFK 65

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
           VDVDEL SVA E+GV A+P+F F K G++VDK VGA K+ L   + KH
Sbjct: 66  VDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]
BLAST of Cucsa.164810 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-27
Identity = 50/108 (46.30%), Postives = 78/108 (72.22%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V++CHT+  W +++  A +  KL+V++FTA+WC PCR +APV  ++A K + NV F K
Sbjct: 5   GEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFT-NVVFFK 64

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
           +DVDEL +VA E+ V A+P+F F K G ++D+ VGA KD +++ + KH
Sbjct: 65  IDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Cucsa.164810 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 1 

Query: 5   GKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVTFLK 64
           G+V++CHTV  W ++L  A +  KL+V++FTATWC PCR +APV  DLA K   +V F K
Sbjct: 5   GEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDVVFFK 64

Query: 65  VDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
           VDVDEL +VA E+ V A+P+F F K G++ +  VGA K+ +   + KH
Sbjct: 65  VDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]
BLAST of Cucsa.164810 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 98.2 bits (243), Expect = 3.5e-21
Identity = 46/110 (41.82%), Postives = 73/110 (66.36%), Query Frame = 1 

Query: 2   NDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNVT 61
           ++  +V+   +   W+    + K+ NKL+VV+F+A+WC PCR + P +  +A+K  N+V 
Sbjct: 22  SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKF-NDVD 81

Query: 62  FLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSK 112
           F+K+DVDEL  VA E+ V A+P+F   K GK +++ +GA+KD L K VSK
Sbjct: 82  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]
BLAST of Cucsa.164810 vs. NCBI nr
Match: gi|449464452|ref|XP_004149943.1| (PREDICTED: thioredoxin H1-like [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
           TFLKVDVDELMSVA+EYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cucsa.164810 vs. NCBI nr
Match: gi|659129896|ref|XP_008464900.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 5.9e-55
Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           MNDMGKVVSCHTV SWKQQLLKAKQ NKLVVVNFTATWCAPCRGMAPVL+DLANKMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
             LKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cucsa.164810 vs. NCBI nr
Match: gi|449464454|ref|XP_004149944.1| (PREDICTED: thioredoxin H-type-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QCNKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]
BLAST of Cucsa.164810 vs. NCBI nr
Match: gi|659129894|ref|XP_008464899.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+Q NKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 115
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K++L  T+SKH A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114

[Close]
BLAST of Cucsa.164810 vs. NCBI nr
Match: gi|659129892|ref|XP_008464898.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 78/112 (69.64%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60
           M D+GKV++CHT+ SW QQLLKA+Q NKL+VVNFTA WC PC  MA VLE+LA KM NNV
Sbjct: 1   MADVGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKM-NNV 60

Query: 61  TFLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 113
            FLKVD+DEL SVA E+ V ALPS+ F KNG+LV+KF GA+KDVL  TVSKH
Sbjct: 61  IFLKVDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 111

The following BLAST results are available for this feature:
BLAST of Cucsa.164810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH1_ARATH6.0e-3153.98Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1[more]
TRXH_RICCO7.8e-3155.45Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH2_BRANA2.3e-3055.56Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1[more]
TRXH4_ARATH4.3e-2954.63Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
TRXH2_TOBAC1.1e-2751.75Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1[more]
BLAST of Cucsa.164810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSB1_CUCSA1.4e-5899.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1[more]
A0A0A0KLS7_CUCSA1.1e-4475.44Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1[more]
A0A0A0KLR8_CUCSA1.1e-3669.64Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1[more]
A0A0A0LGF7_CUCSA1.4e-3466.07Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1[more]
R0H8K4_9BRAS2.7e-3056.64Thioredoxin OS=Capsella rubella GN=CARUB_v10019026mg PE=3 SV=1[more]
BLAST of Cucsa.164810 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51030.13.4e-3253.98 thioredoxin H-type 1[more]
AT1G19730.12.4e-3054.63 Thioredoxin superfamily protein[more]
AT1G45145.14.2e-2746.30 thioredoxin H-type 5[more]
AT5G42980.11.8e-2549.07 thioredoxin 3[more]
AT5G39950.13.5e-2141.82 thioredoxin 2[more]
BLAST of Cucsa.164810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464452|ref|XP_004149943.1|2.0e-5899.12PREDICTED: thioredoxin H1-like [Cucumis sativus][more]
gi|659129896|ref|XP_008464900.1|5.9e-5595.61PREDICTED: thioredoxin H1-like [Cucumis melo][more]
gi|449464454|ref|XP_004149944.1|1.6e-4475.44PREDICTED: thioredoxin H-type-like [Cucumis sativus][more]
gi|659129894|ref|XP_008464899.1|1.8e-4374.56PREDICTED: thioredoxin H-type-like [Cucumis melo][more]
gi|659129892|ref|XP_008464898.1|1.2e-3669.64PREDICTED: thioredoxin H1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.164810.1Cucsa.164810.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..114
score: 1.6
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 7..113
score: 6.0
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 4..113
score: 6.75
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 8..112
score: 8.1
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 1..114
score: 12
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 31..49
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 38..47
score: 7.0E-6coord: 78..89
score: 7.0E-6coord: 30..38
score: 7.
NoneNo IPR availablePANTHERPTHR10438:SF274THIOREDOXIN H1coord: 1..114
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.164810Csa5G190490Cucumber (Chinese Long) v2cgycuB251
Cucsa.164810MELO3C026569Melon (DHL92) v3.5.1cgymeB290
Cucsa.164810CSPI05G10150Wild cucumber (PI 183967)cgycpiB258
Cucsa.164810CmaCh04G001780Cucurbita maxima (Rimu)cgycmaB0471
Cucsa.164810CmoCh04G001800Cucurbita moschata (Rifu)cgycmoB0474
Cucsa.164810Lsi04G009290Bottle gourd (USVL1VR-Ls)cgylsiB276
Cucsa.164810Cp4.1LG01g05210Cucurbita pepo (Zucchini)cgycpeB0457
Cucsa.164810MELO3C034311.2Melon (DHL92) v3.6.1cgymedB285
Cucsa.164810CsaV3_5G008640Cucumber (Chinese Long) v3cgycucB264
Cucsa.164810Bhi07G000596Wax gourdcgywgoB341
Cucsa.164810Carg18348Silver-seed gourdcarcgyB0108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.164810Watermelon (97103) v2cgywmbB294
Cucsa.164810Watermelon (97103) v2cgywmbB295
Cucsa.164810Wax gourdcgywgoB339
Cucsa.164810Cucumber (Gy14) v1cgycgyB015
Cucsa.164810Cucumber (Gy14) v1cgycgyB084
Cucsa.164810Cucumber (Gy14) v1cgycgyB105
Cucsa.164810Cucurbita maxima (Rimu)cgycmaB0467
Cucsa.164810Cucurbita maxima (Rimu)cgycmaB0472
Cucsa.164810Cucurbita moschata (Rifu)cgycmoB0468
Cucsa.164810Cucurbita moschata (Rifu)cgycmoB0473
Cucsa.164810Cucurbita moschata (Rifu)cgycmoB0475
Cucsa.164810Wild cucumber (PI 183967)cgycpiB254
Cucsa.164810Wild cucumber (PI 183967)cgycpiB255
Cucsa.164810Wild cucumber (PI 183967)cgycpiB261
Cucsa.164810Cucumber (Chinese Long) v2cgycuB247
Cucsa.164810Cucumber (Chinese Long) v2cgycuB248
Cucsa.164810Cucumber (Chinese Long) v2cgycuB254
Cucsa.164810Melon (DHL92) v3.5.1cgymeB292
Cucsa.164810Melon (DHL92) v3.5.1cgymeB293
Cucsa.164810Melon (DHL92) v3.5.1cgymeB294
Cucsa.164810Melon (DHL92) v3.5.1cgymeB295
Cucsa.164810Watermelon (Charleston Gray)cgywcgB288
Cucsa.164810Watermelon (Charleston Gray)cgywcgB293
Cucsa.164810Watermelon (Charleston Gray)cgywcgB294
Cucsa.164810Watermelon (97103) v1cgywmB303
Cucsa.164810Watermelon (97103) v1cgywmB306
Cucsa.164810Watermelon (97103) v1cgywmB309
Cucsa.164810Watermelon (97103) v1cgywmB312
Cucsa.164810Cucurbita pepo (Zucchini)cgycpeB0458
Cucsa.164810Silver-seed gourdcarcgyB0746