Csa5G190490 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G190490
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionThioredoxin; contains IPR005746 (Thioredoxin), IPR012336 (Thioredoxin-like fold)
LocationChr5 : 8578421 .. 8579518 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATGCAACAAGCTGGTATATATATCTCTACTTTTTCTTTAGTTTTCAAGATCAAATCCTAAATTTTGAAACTAAACACTCGTTTGACAATCTTAATTAGTTTGTTGGTCTTTGAAGTACAGTTTTATAATACCACTAAAAAAACACTTATTTTCTCTGTCAAATTCTAAAAACAAAAACCAGTATTTAAAAGGAAAATTTTAAAACATACTAAATTTTACAAAATATTTACAATATACAGCAAATTCTTTTGCTATTTTTAAAAATACCCCTATTTAAAAACTAGTATTTTCAATAATTTATGGTTTTCATTTTAAATATTTGGGTAAGAATTCAAGTATTTCCTCCAAAAATGTATAAATCATACTGTAAAAAGCATAATTTTTTAAGAAAAAATAAATTTAAAACATATAATTACCAAAGGTAACCAATATGGTCCACTTTCACATTTAAGTTAAAAATAATAAAATACATAGCACAAGCATAAAATTATAGAATTAGTAAAAGACTAAAAAATTCACATGCGGTGTTATTTTTTCAAGTATTTTATTTTTTACTATATTTTTAGTTTAATTCTTAAATTGTGCTCTTAAAAATTATTATGAAAACGAGACTGTAGCTAACAATGCACTATTGTAATTGGTAGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGGTGAGTTAAAAAGAAATTATTATTATTATTCGATCATATATATATGCTTTTGCTGATGCAACTTTTGTTAATTAAAATTGTGATTTAATTTAATTTTGTACTGTGTTTTACAGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACTATTTCCAAACATTCAGCCTATTGAAGAAAA

mRNA sequence

ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATGCAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACTATTTCCAAACATTCAGCCTATTGA

Coding sequence (CDS)

ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTATCCTCATGGAAGCAGCACCTACTCAAAGCCGAACAATGCAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTTATATTCTTGAAAGTTGATATTGATGAACTTATGAGTATTGCAAAGGAGTTTGGAGTCAGTTCCGTTCCTTCATTTCAATTCTTAAAGAATGGAAAATTGGTGGACAAGTTCGTGGGTGCAAAGAAAACTTTACTCCAAAACACTATTTCCAAACATTCAGCCTATTGA

Protein sequence

MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY*
Homology
[Close]
BLAST of Csa5G190490 vs. Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.9e-34
Identity = 69/113 (61.06%), Postives = 83/113 (73.45%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHTV +W + L K      L+VV+FTASWCGPCRF+AP L ELAKK+  NV 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLP-NVT 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           FLKVD+DEL ++A E+ V S+P+F FLK GK++DK VGAKK  LQ TI+KH A
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]
BLAST of Csa5G190490 vs. Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-33
Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK  LQ+TI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Csa5G190490 vs. Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-32
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAE G+VI  HTV +W +HL K     KL+VV+FTASWCGPC+F+A    ELAKKM   V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMP-TV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 113
            FLKVD+DEL S+A ++ V ++P+F FLK GK+VDK VGAKK  LQ TI+KH
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]
BLAST of Csa5G190490 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-31
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 114
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ  I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Csa5G190490 vs. Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-31
Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+V  CH V  W ++  K  +  KLVVV+FTASWCGPCRF+APIL ++AKKM  +VI
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMP-HVI 68

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           FLKVD+DEL +++ E+ V ++P+F F+K+GK VD+ VGAKK  LQ TI KH+A
Sbjct: 69  FLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAA 120

[Close]
BLAST of Csa5G190490 vs. TrEMBL
Match: A0A0A0KLS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 116
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 115

[Close]
BLAST of Csa5G190490 vs. TrEMBL
Match: A0A0A0KSB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-44
Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QCNKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Csa5G190490 vs. TrEMBL
Match: A0A0A0KLR8_CUCSA (Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.1e-39
Identity = 80/113 (70.80%), Postives = 98/113 (86.73%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVI CHT++SW Q LLKA+Q NKL+VVNFTA WCGPC  MA +LEELAKKM NNV
Sbjct: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 114
           IFLKVDIDEL ++A EF V+++PS+ FLKNG+LV+KF GAKK +L++T+SKH+
Sbjct: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 112

[Close]
BLAST of Csa5G190490 vs. TrEMBL
Match: A0A0A0LGF7_CUCSA (Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-34
Identity = 71/113 (62.83%), Postives = 94/113 (83.19%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAE  +VI+CHTV SWKQ LLK +Q +KL+VV+FTA+WCGPCR +AP+  ELA+KMS NV
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMS-NV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 114
           IFLKVD+D+L ++A E+GVS++P F FLKNGK+VD+FVGA+K  L+  +S H+
Sbjct: 61  IFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]
BLAST of Csa5G190490 vs. TrEMBL
Match: A0A0B2QL73_GLYSO (Thioredoxin H-type OS=Glycine soja GN=glysoja_021976 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-34
Identity = 73/114 (64.04%), Postives = 92/114 (80.70%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAE G+VI  H+V  WK+HL K E+  KL+VV+FTASWCGPCRF+APIL E AKK+  NV
Sbjct: 1   MAEEGQVIGVHSVEEWKEHLKKGEESKKLIVVDFTASWCGPCRFIAPILAEFAKKLP-NV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
            FLKVD+DEL +++KE+G+ ++P+F FLK GKLVDK VGAKK  LQ TI+KH+A
Sbjct: 61  TFLKVDVDELETVSKEWGIEAMPTFLFLKEGKLVDKVVGAKKEELQLTIAKHAA 113

[Close]
BLAST of Csa5G190490 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-34
Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK  LQ+TI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Csa5G190490 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 8.9e-33
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 1 

Query: 2   AEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 114
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ  I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Csa5G190490 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 124.8 bits (312), Expect = 3.5e-29
Identity = 53/112 (47.32%), Postives = 80/112 (71.43%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MA  G+VI+CHT+  W + +  A +  KL+V++FTASWC PCRF+AP+  E+AKK + NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFT-NV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 113
           +F K+D+DEL ++A+EF V ++P+F F+K G ++D+ VGA K  +   + KH
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Csa5G190490 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MA  G+VI+CHTV  W + L  A +  KL+V++FTA+WC PCRF+AP+  +LAKK   +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKH 113
           +F KVD+DEL ++A+EF V ++P+F F+K G++ +  VGA K  +   + KH
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]
BLAST of Csa5G190490 vs. TAIR10
Match: AT3G17880.1 (AT3G17880.1 tetraticopeptide domain-containing thioredoxin)

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-23
Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = 1 

Query: 5   GKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLK 64
           G+VIS H+ S  +     A++ ++L+++ FTA+WCGPCR+M+P+   LA + S  V+FLK
Sbjct: 270 GEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSR-VVFLK 329

Query: 65  VDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           VDID+   +A  + +SSVP+F F+++GK VDK VGA K  L+  I++HS+
Sbjct: 330 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSS 378

[Close]
BLAST of Csa5G190490 vs. NCBI nr
Match: gi|449464454|ref|XP_004149944.1| (PREDICTED: thioredoxin H-type-like [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 116
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSAY 115

[Close]
BLAST of Csa5G190490 vs. NCBI nr
Match: gi|659129894|ref|XP_008464899.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-55
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114

[Close]
BLAST of Csa5G190490 vs. NCBI nr
Match: gi|449464452|ref|XP_004149943.1| (PREDICTED: thioredoxin H1-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QCNKLVVVNFTA+WC PCR MAP+LE+LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
            FLKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Csa5G190490 vs. NCBI nr
Match: gi|659129896|ref|XP_008464900.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+Q NKLVVVNFTA+WC PCR MAP+L++LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 115
           I LKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K +L  T+SKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Csa5G190490 vs. NCBI nr
Match: gi|659129892|ref|XP_008464898.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 6.0e-39
Identity = 80/113 (70.80%), Postives = 100/113 (88.50%), Query Frame = 1 

Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MA++GKVI+CHT++SW Q LLKA+Q NKL+VVNFTA WCGPC  MA +LEELAKKM NNV
Sbjct: 1   MADVGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKM-NNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 114
           IFLKVDIDEL S+AKEF V+++PS+ FLKNG+LV+KF GAKK +L++T+SKH+
Sbjct: 61  IFLKVDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 112

The following BLAST results are available for this feature:
BLAST of Csa5G190490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH_RICCO9.9e-3461.06Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH1_ARATH3.8e-3358.41Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1[more]
TRXH2_TOBAC9.3e-3259.82Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1[more]
TRXH4_ARATH1.6e-3157.14Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
TRXH1_TOBAC2.7e-3156.64Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1[more]
BLAST of Csa5G190490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLS7_CUCSA1.4e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1[more]
A0A0A0KSB1_CUCSA1.1e-4475.44Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1[more]
A0A0A0KLR8_CUCSA7.1e-3970.80Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1[more]
A0A0A0LGF7_CUCSA1.8e-3462.83Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1[more]
A0A0B2QL73_GLYSO2.4e-3464.04Thioredoxin H-type OS=Glycine soja GN=glysoja_021976 PE=4 SV=1[more]
BLAST of Csa5G190490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51030.12.1e-3458.41 thioredoxin H-type 1[more]
AT1G19730.18.9e-3357.14 Thioredoxin superfamily protein[more]
AT1G45145.13.5e-2947.32 thioredoxin H-type 5[more]
AT5G42980.11.2e-2647.32 thioredoxin 3[more]
AT3G17880.12.2e-2345.45 tetraticopeptide domain-containing thioredoxin[more]
BLAST of Csa5G190490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464454|ref|XP_004149944.1|2.0e-58100.00PREDICTED: thioredoxin H-type-like [Cucumis sativus][more]
gi|659129894|ref|XP_008464899.1|3.5e-5597.37PREDICTED: thioredoxin H-type-like [Cucumis melo][more]
gi|449464452|ref|XP_004149943.1|1.6e-4475.44PREDICTED: thioredoxin H1-like [Cucumis sativus][more]
gi|659129896|ref|XP_008464900.1|1.2e-4273.68PREDICTED: thioredoxin H1-like [Cucumis melo][more]
gi|659129892|ref|XP_008464898.1|6.0e-3970.80PREDICTED: thioredoxin H1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU122776cucumber EST collection version 3.0transcribed_cluster
CU125023cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G190490.1Csa5G190490.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU122776CU122776transcribed_cluster
CU125023CU125023transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..114
score: 3.6
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 4..112
score: 5.9
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 4..112
score: 1.37
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 9..112
score: 5.6
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 1..114
score: 12
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 31..49
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 38..47
score: 3.9E-6coord: 78..89
score: 3.9E-6coord: 30..38
score: 3.
NoneNo IPR availablePANTHERPTHR10438:SF274THIOREDOXIN H1coord: 1..114
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G190490MELO3C026569Melon (DHL92) v3.5.1cumeB341
Csa5G190490Lsi04G009290Bottle gourd (USVL1VR-Ls)culsiB363
Csa5G190490MELO3C034311.2Melon (DHL92) v3.6.1cumedB350
Csa5G190490Bhi07G000596Wax gourdcuwgoB511
Csa5G190490CSPI05G10150Wild cucumber (PI 183967)cpicuB240
Csa5G190490Cucsa.164810Cucumber (Gy14) v1cgycuB251
Csa5G190490CmaCh04G001780Cucurbita maxima (Rimu)cmacuB747
Csa5G190490CmoCh04G001800Cucurbita moschata (Rifu)cmocuB737
Csa5G190490Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecuB438
Csa5G190490Carg18348Silver-seed gourdcarcuB0098
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G190490Cucurbita pepo (Zucchini)cpecuB084
Csa5G190490Cucurbita pepo (Zucchini)cpecuB437
Csa5G190490Bottle gourd (USVL1VR-Ls)culsiB341
Csa5G190490Cucumber (Gy14) v2cgybcuB178
Csa5G190490Cucumber (Gy14) v2cgybcuB224
Csa5G190490Melon (DHL92) v3.6.1cumedB398
Csa5G190490Silver-seed gourdcarcuB0292
Csa5G190490Silver-seed gourdcarcuB0694
Csa5G190490Silver-seed gourdcarcuB1014
Csa5G190490Watermelon (97103) v2cuwmbB376
Csa5G190490Watermelon (97103) v2cuwmbB392
Csa5G190490Wax gourdcuwgoB513
Csa5G190490Cucumber (Chinese Long) v2cucuB101
Csa5G190490Cucumber (Chinese Long) v2cucuB139
Csa5G190490Cucurbita maxima (Rimu)cmacuB677
Csa5G190490Cucurbita maxima (Rimu)cmacuB746
Csa5G190490Cucurbita moschata (Rifu)cmocuB666
Csa5G190490Cucurbita moschata (Rifu)cmocuB736
Csa5G190490Melon (DHL92) v3.5.1cumeB411
Csa5G190490Watermelon (Charleston Gray)cuwcgB384
Csa5G190490Watermelon (Charleston Gray)cuwcgB387
Csa5G190490Watermelon (Charleston Gray)cuwcgB402
Csa5G190490Watermelon (97103) v1cuwmB391
Csa5G190490Watermelon (97103) v1cuwmB423