Cp4.1LG01g00370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g00370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionArabinogalactan peptide-like protein
LocationCp4.1LG01 : 3658414 .. 3660321 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAAGAAAAAGGCTAACCCTATAAAAGGGCACACCCTGGAAAGTCTGGATCCCCTCGTTTGCCCGTCGCGAGACTGCCTCTGTTTCCGTTTAGAGATTTCGTCTTCTTCTTCATTTCGCCATTCGAGAAGAGAAAGGGAGATTCCTTTCCTTCTCTCTCTCTCTGCGAGACTCTTTGAAGCTATTGGAGAAGAAGCCTTTTGAAGCTTCTTTACCTGAGAGTCGAATCGCAGAGAGAGATCTAACCTCCTGTACTACATTTCTTGCGATTCTTCGCCTGCAGAAAGGAGAGGGGAAATTACCGCACGATTCGGACTCATATGGCGGTTTCTAGGGCATCTTTTGGATTCGTGGCTGCCGCTGCGCTCGTCTTCACCATCTTCTTGCCGGTTGCTCAGCCTCAGTCTTTGGCTCCGGCTCCCGCTCCCACCAGCGACGGTTAGTTCTCTTTCTTTTATGTTTTATTTTGCATTTATGTTCCAGATCTGTATGCAATTCTTTGATCTCTGACCTTTGTTTATTCTTTGATTTCGGTAGAATATTTTGGCGTTATTTTTTAGGTTCGGTTTTTGAGTTAATTGGAATTTTGAAAATTTTGTTTCAATTTACGTTTATGTACTGCGACTTGACAAACTTCTCAAATCGTAACTTATTTCACTTTTTTGTCCCTTCAATTTTTTGTGTGTTCAATAAAGCTTTTGGTGGATCCATTTTTGGTACAAGTACCATCAATTTTAGTTATCTGCGGGCCAATTTGAGAAATAAAAAAAAAATAAAAAAAATAAAACATCAATCATACAATATACTTCAATAAAGATATGAAGATATGAAGAAAGAGTTGTCAAAACTATCAAAGATGTTTCAATTCATGTCACAGAAGAAGAATAAAGTTTGATGGTTATAAATTTAGAGTGAGTTACCCTTCAGAGTAATTTAGAGTTATTTTATTTTGACGTGACCATAAAACTGAAAATATAAAACTGGAAATAGCGAAATAGCTTCGCAGTAATTTCAATAATTAATAAATATCCCATTTTGGAGTGAAATTAAACCGATTGTCATTATCAGACTAAATATATGGTTTTACTTCTTTTTTCTGCACTTTCTAAATTTATCAAGAAATTTAGCTGCATTGCTCCTTGATTAATTAAATCACACAAGCCTTACAGTACAATGTTTTCTACTCAATTACTAGGAGCGGTTTGGGCATTGGCTTGGATTTTGGTGGGATTGGGTTCTAAATCTATATCCATGTTTGGTCGAAATAACAAACTCTCTCAAAATCTATGGATACCCCTCGAAATCTATGGTCTCCGTTGAAATTACAATAATTGAGGGTCCACCACTTTTGTTTTCCATTTTCTCACAATTATGGTGGTTCCTACCATTTTTGCTTGGGTCTCGTGATTTGTTTAATTAAAATGCAGGGTTATATTATCTTAGTTCATAATATGGTTAATGTTGAAAAATGAAAAGACCAGAAGGAAATCAACTAATTGGAATGCGTGCAATGGGAATTGACAGGGACATCCATAGATCAAGGGATAGCTTATATCTTAATGGGGGTGGCATTGGCGCTCACATATCTCATCCACAGTGCTGACTTAGCCAGCAGCAGCAGCAGCAGCTTCTAGGAGCATAATAGTATTTGGGAGTTTAGTTAGAAATGGCAATGGGTTCTTCTCTTGCTGGATCCTTTCCTGTTTCTGTTTTGGTTTTTATTTATTCATGAGATCATCATCATCATCCTCACACATTTCTTCTATGTACATTCTCCTCATTTTTAAATCACATTTATTGGCTTTCCCTTTTTCCCCTTTCCTCTCTTCAATTTTGTACCCAAATAACATCAAAAATATTCTCTTCGTAATGTTATTAATATATTTAAAATTAAAATTAAGTTTGA

mRNA sequence

GGAAAAAGAAAAAGGCTAACCCTATAAAAGGGCACACCCTGGAAAGTCTGGATCCCCTCGTTTGCCCGTCGCGAGACTGCCTCTGTTTCCGTTTAGAGATTTCGTCTTCTTCTTCATTTCGCCATTCGAGAAGAGAAAGGGAGATTCCTTTCCTTCTCTCTCTCTCTGCGAGACTCTTTGAAGCTATTGGAGAAGAAGCCTTTTGAAGCTTCTTTACCTGAGAGTCGAATCGCAGAGAGAGATCTAACCTCCTGTACTACATTTCTTGCGATTCTTCGCCTGCAGAAAGGAGAGGGGAAATTACCGCACGATTCGGACTCATATGGCGGTTTCTAGGGCATCTTTTGGATTCGTGGCTGCCGCTGCGCTCGTCTTCACCATCTTCTTGCCGGTTGCTCAGCCTCAGTCTTTGGCTCCGGCTCCCGCTCCCACCAGCGACGGGACATCCATAGATCAAGGGATAGCTTATATCTTAATGGGGGTGGCATTGGCGCTCACATATCTCATCCACAGTGCTGACTTAGCCAGCAGCAGCAGCAGCAGCTTCTAGGAGCATAATAGTATTTGGGAGTTTAGTTAGAAATGGCAATGGGTTCTTCTCTTGCTGGATCCTTTCCTGTTTCTGTTTTGGTTTTTATTTATTCATGAGATCATCATCATCATCCTCACACATTTCTTCTATGTACATTCTCCTCATTTTTAAATCACATTTATTGGCTTTCCCTTTTTCCCCTTTCCTCTCTTCAATTTTGTACCCAAATAACATCAAAAATATTCTCTTCGTAATGTTATTAATATATTTAAAATTAAAATTAAGTTTGA

Coding sequence (CDS)

ATGGCGGTTTCTAGGGCATCTTTTGGATTCGTGGCTGCCGCTGCGCTCGTCTTCACCATCTTCTTGCCGGTTGCTCAGCCTCAGTCTTTGGCTCCGGCTCCCGCTCCCACCAGCGACGGGACATCCATAGATCAAGGGATAGCTTATATCTTAATGGGGGTGGCATTGGCGCTCACATATCTCATCCACAGTGCTGACTTAGCCAGCAGCAGCAGCAGCAGCTTCTAG

Protein sequence

MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTYLIHSADLASSSSSSF
Homology
[Close]
BLAST of Cp4.1LG01g00370 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.7e-15
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 4  SRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTYLIH 63
          SR S   +A  A VF +  P A  QSLAPAP+PTSDGTSIDQGIAY+LM VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 SADLASSSSSSF 76
            D +SSS + F
Sbjct: 63 PLDASSSSYTFF 74

[Close]
BLAST of Cp4.1LG01g00370 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-13
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 4  SRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTYLIH 63
          SR S    A  + VF + L +A  QSLAPAPAPTSDGTSIDQGIAY+LM VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 SADLASSSS 73
            D +SS S
Sbjct: 63 PLDASSSYS 71

[Close]
BLAST of Cp4.1LG01g00370 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.0e-12
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MA  +     +A   ++  I LP+AQ  S +PAPAPTSDGTSIDQGIAY+LM VALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

[Close]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match: A0A0A0KZS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051380 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MAVSR+SFG +AA AL+F IFLPVA P SLAPAPAPTSDGTSIDQGIAY+LM VALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHSADL 68
          LIH+ADL
Sbjct: 61 LIHNADL 67

[Close]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match: A0A067JZA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.4e-16
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 1 

Query: 1  MAVSRASFGFVA-AAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALT 60
          MAVSR SFG +A A ALVF I LP  Q QS APAP+PTSDGTSIDQGIAY+LM VAL LT
Sbjct: 1  MAVSRVSFGVLAFAVALVFAIALPSVQAQSFAPAPSPTSDGTSIDQGIAYVLMLVALVLT 60

Query: 61 YLIHSADLAS 70
          YLIH+AD  S
Sbjct: 61 YLIHAADFCS 70

[Close]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match: A0A087GCU3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G416500 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.7e-14
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          M+VSR  FG +   ++VF+I +P+AQ QS APAPAPTSDGT+IDQGIAY+LM VAL LTY
Sbjct: 1  MSVSRVFFGIITFISIVFSILMPMAQAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match: A0A067G9U3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034994mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-13
Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVA------QPQSLAPAPAPTSDGTSIDQGIAYILMGV 60
          MAVSR S  F    ALVF I LP A      Q Q+ APAP+PTSDGTSIDQGIAY+LM V
Sbjct: 1  MAVSRVSLVFAVVVALVFAIILPPALANAQTQTQASAPAPSPTSDGTSIDQGIAYVLMAV 60

Query: 61 ALALTYLIHSADLASS 71
          AL LTYLIH+AD   S
Sbjct: 61 ALVLTYLIHTADFCYS 76

[Close]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match: V4TLZ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023159mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-13
Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVA------QPQSLAPAPAPTSDGTSIDQGIAYILMGV 60
          MAVSR S  F    ALVF I LP A      Q Q+ APAP+PTSDGTSIDQGIAY+LM V
Sbjct: 1  MAVSRVSLVFAVVVALVFAIILPPALANAQTQTQASAPAPSPTSDGTSIDQGIAYVLMAV 60

Query: 61 ALALTYLIHSADLASS 71
          AL LTYLIH+AD   S
Sbjct: 61 ALVLTYLIHTADFCYS 76

[Close]
BLAST of Cp4.1LG01g00370 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20)

HSP 1 Score: 80.5 bits (197), Expect = 4.9e-16
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 4  SRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTYLIH 63
          SR S   +A  A VF +  P A  QSLAPAP+PTSDGTSIDQGIAY+LM VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 SADLASSSSSSF 76
            D +SSS + F
Sbjct: 63 PLDASSSSYTFF 74

[Close]
BLAST of Cp4.1LG01g00370 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41)

HSP 1 Score: 77.8 bits (190), Expect = 3.2e-15
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          M+ SR  FG     +++F I LP+A  QS APAPAPTSDGT+IDQGIAY+LM VAL LTY
Sbjct: 1  MSGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]
BLAST of Cp4.1LG01g00370 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16)

HSP 1 Score: 76.3 bits (186), Expect = 9.2e-15
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 4  SRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTYLIH 63
          SR S    A  + VF + L +A  QSLAPAPAPTSDGTSIDQGIAY+LM VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 SADLASSSS 73
            D +SS S
Sbjct: 63 PLDASSSYS 71

[Close]
BLAST of Cp4.1LG01g00370 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22)

HSP 1 Score: 70.5 bits (171), Expect = 5.1e-13
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MA  +     +A   ++  I LP+AQ  S +PAPAPTSDGTSIDQGIAY+LM VALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

[Close]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match: gi|449464078|ref|XP_004149756.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20
Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MAVSR+SFG +AA AL+F IFLPVA P SLAPAPAPTSDGTSIDQGIAY+LM VALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHSADL 68
          LIH+ADL
Sbjct: 61 LIHNADL 67

[Close]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match: gi|659102138|ref|XP_008451971.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-19
Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MAVSR+SF  +AA AL+F IFLPVA P SLAPAPAPTSDGTSIDQGIAY+LM VALALTY
Sbjct: 1  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHSADLASS 71
          LIH+ADL+++
Sbjct: 61 LIHNADLSNN 70

[Close]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match: gi|720033434|ref|XP_010266430.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera])

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MAVSR SFG VA  AL+F + LP  Q QS+APAPAPTSDGTSIDQGIAY+LM VAL LTY
Sbjct: 1  MAVSRVSFGVVAIVALIFAVALPAVQAQSVAPAPAPTSDGTSIDQGIAYVLMLVALVLTY 60

Query: 61 LIHSADLAS 70
          LIH  D +S
Sbjct: 61 LIHPLDASS 69

[Close]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match: gi|720017497|ref|XP_010261486.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-16
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 1  MAVSRASFGFVAAAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALTY 60
          MAVSR SFG +A  AL+F+I  P  Q QSLAPAPAPTSDGTSIDQG+AY+LM VAL LTY
Sbjct: 1  MAVSRVSFGVMAIVALIFSIAFPAVQAQSLAPAPAPTSDGTSIDQGVAYVLMLVALVLTY 60

Query: 61 LIHSADLAS 70
          LIH  D +S
Sbjct: 61 LIHPLDASS 69

[Close]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match: gi|802735165|ref|XP_012086771.1| (PREDICTED: arabinogalactan peptide 20-like [Jatropha curcas])

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 1 

Query: 1  MAVSRASFGFVA-AAALVFTIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYILMGVALALT 60
          MAVSR SFG +A A ALVF I LP  Q QS APAP+PTSDGTSIDQGIAY+LM VAL LT
Sbjct: 1  MAVSRVSFGVLAFAVALVFAIALPSVQAQSFAPAPSPTSDGTSIDQGIAYVLMLVALVLT 60

Query: 61 YLIHSADLAS 70
          YLIH+AD  S
Sbjct: 61 YLIHAADFCS 70

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g00370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGP20_ARATH8.7e-1563.89Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1[more]
AGP16_ARATH1.6e-1365.22Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1[more]
AGP22_ARATH9.0e-1260.32Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1[more]
BLAST of Cp4.1LG01g00370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZS8_CUCSA1.3e-2083.58Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051380 PE=4 SV=1[more]
A0A067JZA6_JATCU9.4e-1674.29Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1[more]
A0A087GCU3_ARAAL6.7e-1468.25Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G416500 PE=4 SV=1[more]
A0A067G9U3_CITSI1.5e-1364.47Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034994mg PE=4 SV=1[more]
V4TLZ1_9ROSI1.5e-1364.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023159mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g00370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61640.14.9e-1663.89 arabinogalactan protein 20[more]
AT5G24105.13.2e-1565.08 arabinogalactan protein 41[more]
AT2G46330.19.2e-1565.22 arabinogalactan protein 16[more]
AT5G53250.15.1e-1360.32 arabinogalactan protein 22[more]
BLAST of Cp4.1LG01g00370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464078|ref|XP_004149756.1|1.8e-2083.58PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus][more]
gi|659102138|ref|XP_008451971.1|1.5e-1978.57PREDICTED: arabinogalactan peptide 22-like [Cucumis melo][more]
gi|720033434|ref|XP_010266430.1|2.1e-1672.46PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera][more]
gi|720017497|ref|XP_010261486.1|4.6e-1671.01PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera][more]
gi|802735165|ref|XP_012086771.1|1.3e-1574.29PREDICTED: arabinogalactan peptide 20-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009424AGP16/20/22/41
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0050896 response to stimulus
biological_process GO:0044763 single-organism cellular process
biological_process GO:0008150 biological_process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0042446 hormone biosynthetic process
biological_process GO:0042430 indole-containing compound metabolic process
biological_process GO:1901362 organic cyclic compound biosynthetic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0044283 small molecule biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00370.1Cp4.1LG01g00370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009424Arabinogalactan peptide, AGPPFAMPF06376DUF1070coord: 31..63
score: 5.3
NoneNo IPR availablePANTHERPTHR33374FAMILY NOT NAMEDcoord: 1..74
score: 8.8
NoneNo IPR availablePANTHERPTHR33374:SF2ARABINOGALACTAN PEPTIDE 22-RELATEDcoord: 1..74
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g00370Cucsa.107210Cucumber (Gy14) v1cgycpeB0239
Cp4.1LG01g00370CmaCh16G005600Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g00370CmaCh04G007060Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g00370CmoCh16G006090Cucurbita moschata (Rifu)cmocpeB313
Cp4.1LG01g00370Cla010927Watermelon (97103) v1cpewmB407
Cp4.1LG01g00370Csa4G051380Cucumber (Chinese Long) v2cpecuB406
Cp4.1LG01g00370Csa5G151510Cucumber (Chinese Long) v2cpecuB432
Cp4.1LG01g00370ClCG07G014860Watermelon (Charleston Gray)cpewcgB413
Cp4.1LG01g00370CSPI05G04790Wild cucumber (PI 183967)cpecpiB431
Cp4.1LG01g00370CSPI04G06190Wild cucumber (PI 183967)cpecpiB405
Cp4.1LG01g00370Lsi07G006990Bottle gourd (USVL1VR-Ls)cpelsiB378
Cp4.1LG01g00370MELO3C032818.2Melon (DHL92) v3.6.1cpemedB486
Cp4.1LG01g00370CsaV3_5G002200Cucumber (Chinese Long) v3cpecucB0538
Cp4.1LG01g00370CsaV3_4G006390Cucumber (Chinese Long) v3cpecucB0503
Cp4.1LG01g00370Bhi01G002276Wax gourdcpewgoB0518
Cp4.1LG01g00370CsGy4G006110Cucumber (Gy14) v2cgybcpeB508
Cp4.1LG01g00370Carg22236Silver-seed gourdcarcpeB0839
Cp4.1LG01g00370Carg13053Silver-seed gourdcarcpeB0061
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g00370Cp4.1LG14g02440Cucurbita pepo (Zucchini)cpecpeB233
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g00370Cucurbita pepo (Zucchini)cpecpeB206
Cp4.1LG01g00370Cucurbita maxima (Rimu)cmacpeB324
Cp4.1LG01g00370Cucurbita moschata (Rifu)cmocpeB287
Cp4.1LG01g00370Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g00370Melon (DHL92) v3.5.1cpemeB362
Cp4.1LG01g00370Melon (DHL92) v3.5.1cpemeB415