CmaCh16G005600 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G005600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Arabinogalactan peptide 22
Location	Cma_Chr16 : 2867851 .. 2869383 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGAACTGCCTCTGTACCGTTCAGAGATTTCTCTTAATCGTCTTCTCCATTTCGCCCTTCGAGGAGGGAAAGGGAGATTCCTTTCTCTCTCTCTCTCTCTCTCTGCGAGCCTCTTTGAAGTCATTGAAGAAGAAGGCACTGAAAGCCTCTTGATCTGAGAGACGCATCGCAGAGAGAGATCGAGCCTTGGTACTACATTTCTTGCGATTCATCGCCTGAAGAAAGGAGAGGAGAAAATCACAGCACGATTCGGAGTCAAATGGCGGTTTCCAGGACGTCTTTTGGATTTGTGGCTGCCGCCGCGCTCATCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGTTAGTTCTCTTCTTAATTTCTATTTCTTTAAGTTATGTTTTGTATTTTTGTTCTAGATCTGTGTGGACTGTTGATCTGTGGCTTGAAATGAGTTTTGTTTGTTTATTCTTTGTTTCCTGATTATTTTGAGGGTTTCAGTTTCTGAGTTTACCAAAACATTGTTTCGGTTTACGTTTCTTGATGAACTGTGATTAAAGATATTAAGCGCAAATCTTCACTTTTTTCCCCTTTAGTTTTGATTGTTTGTTCAAGCCTTGGTGGATCTATTTTCCTACACGTATTTGTATTCTCAATTTTGCGAGAGGTCATTGGCATCAATTTGTGCACCAAATGTTAGAAATGACAAATAATACAGAAGCTATTTTCTTGTATCCGTAACAACTGCATAAAGTTATCTTGTAGTTTCTATAAACTATTAATTTGCGAGTGTAATTAAACCTATTGCCATGATTATGCAAAGTAATTCTGTTTGCTATTTGGTTGGCCTGACTACTATTACGTTACCTTTTAGAACAAAGGTGTTTCGTCTTGATGTCTTATACTCTGAAGTTCATTTTAAATAGTTCTTTGAAAAGCAAAATCCTGAGGAATTAGGGTTGAAATTCATAGATTTCTTAGTGAACTTAATTGGTATCTTTGAAACGTCATTTCACAGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAGCAGCTTCTAAAAGATTGTATCAAGCATTTGGAGAACCTCTTTTGATCAAAAGGGAAGGGAATTTAGTTAGAAATGCAAGTGGGGTTCGAGGGGACTGGATTTCTTTTTCCTTTTTTTTTTTTTTTGCATATTGTAGTTCCTTTGGAACCTCTTTTGATCAAGGAGGAAGAGATTTTAGTTAGAAATGCAAATGGGTCTTGAGGGATTTGGATTCTTTTGCATATTGTAGCATTTAGTTAGAAATGCAAATGGGTCTTGAGGGATTTGGATTCTTTTGCATATTGTAGCAGTTCCTTTGGTGTTTCTGTTTTGGTCTTATTTATAATGATGAAAGTCAGTTGGTGTGGTCTTGTATTGCTGTGTACAGTGTCCTGAGTTTGAATGAGACTCCTAGCTCCCTTTTCATGTTTC

mRNA sequence

GCTGAACTGCCTCTGTACCGTTCAGAGATTTCTCTTAATCGTCTTCTCCATTTCGCCCTTCGAGGAGGGAAAGGGAGATTCCTTTCTCTCTCTCTCTCTCTCTCTGCGAGCCTCTTTGAAGTCATTGAAGAAGAAGGCACTGAAAGCCTCTTGATCTGAGAGACGCATCGCAGAGAGAGATCGAGCCTTGGTACTACATTTCTTGCGATTCATCGCCTGAAGAAAGGAGAGGAGAAAATCACAGCACGATTCGGAGTCAAATGGCGGTTTCCAGGACGTCTTTTGGATTTGTGGCTGCCGCCGCGCTCATCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAGCAGCTTCTAAAAGATTGTATCAAGCATTTGGAGAACCTCTTTTGATCAAAAGGGAAGGGAATTTAGTTAGAAATGCAAGTGGGGTTCGAGGGGACTGGATTTCTTTTTCCTTTTTTTTTTTTTTTGCATATTGTAGTTCCTTTGGAACCTCTTTTGATCAAGGAGGAAGAGATTTTAGTTAGAAATGCAAATGGGTCTTGAGGGATTTGGATTCTTTTGCATATTGTAGCATTTAGTTAGAAATGCAAATGGGTCTTGAGGGATTTGGATTCTTTTGCATATTGTAGCAGTTCCTTTGGTGTTTCTGTTTTGGTCTTATTTATAATGATGAAAGTCAGTTGGTGTGGTCTTGTATTGCTGTGTACAGTGTCCTGAGTTTGAATGAGACTCCTAGCTCCCTTTTCATGTTTC

Coding sequence (CDS)

ATGGCGGTTTCCAGGACGTCTTTTGGATTTGTGGCTGCCGCCGCGCTCATCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAGCAGCTTCTAA

Protein sequence

MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSSSF

Homology

[Close]

BLAST of CmaCh16G005600 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-16
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1


Query: 4  SRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH 63
          SR S   +A  A +FA+  P A  QSLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSSS 71
            D SSS
Sbjct: 63 PLDASSS 69

[Close]

BLAST of CmaCh16G005600 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-15
Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 4  SRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH 63
          SR S    A  + +FA+ L +A  QSLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSSSF 72
            D SSS+
Sbjct: 63 PLDASSSY 70

[Close]

BLAST of CmaCh16G005600 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MA  +     +A   +I  I LP+AQ  S +PAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

[Close]

BLAST of CmaCh16G005600 vs. TrEMBL
Match: A0A0A0KZS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051380 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-22
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADL 68
          LIHNADL
Sbjct: 61 LIHNADL 67

[Close]

BLAST of CmaCh16G005600 vs. TrEMBL
Match: A0A067JZA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-17
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 1


Query: 1  MAVSRTSFGFVA-AAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALT 60
          MAVSR SFG +A A AL+FAI LP  Q QS APAP+PTSDGTSIDQGIAYVLMLVAL LT
Sbjct: 1  MAVSRVSFGVLAFAVALVFAIALPSVQAQSFAPAPSPTSDGTSIDQGIAYVLMLVALVLT 60

Query: 61 YLIHNADLSS 70
          YLIH AD  S
Sbjct: 61 YLIHAADFCS 70

[Close]

BLAST of CmaCh16G005600 vs. TrEMBL
Match: A0A087GCU3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G416500 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.5e-15
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          M+VSR  FG +   +++F+I +P+AQ QS APAPAPTSDGT+IDQGIAYVLMLVAL LTY
Sbjct: 1  MSVSRVFFGIITFISIVFSILMPMAQAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]

BLAST of CmaCh16G005600 vs. TrEMBL
Match: K3YVR2_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_018358mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.5e-15
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 1


Query: 1   MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
           MA +R+  G +A AAL+ AIF+P A   + APAPAPTSDGTSID GIAYVLMLVAL LTY
Sbjct: 135 MAAARSPLGAIAVAALVVAIFMPAAAAAAQAPAPAPTSDGTSIDLGIAYVLMLVALVLTY 194

Query: 61  LIHNADLSSSF 72
           LIH  D SS +
Sbjct: 195 LIHPLDASSPY 205

[Close]

BLAST of CmaCh16G005600 vs. TrEMBL
Match: B9RCN6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691010 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.5e-15
Identity = 54/71 (76.06%), Postives = 56/71 (78.87%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR     +   ALIFAI LPV Q QS APAPAPTSDGTSIDQGIAYVLMLVAL LTY
Sbjct: 1  MAVSRVLA--IVVVALIFAIALPV-QAQSSAPAPAPTSDGTSIDQGIAYVLMLVALVLTY 60

Query: 61 LIHNADLSSSF 72
          LIH ADL+ SF
Sbjct: 61 LIHAADLTCSF 68

[Close]

BLAST of CmaCh16G005600 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20)

HSP 1 Score: 84.3 bits (207), Expect = 3.2e-17
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1


Query: 4  SRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH 63
          SR S   +A  A +FA+  P A  QSLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSSS 71
            D SSS
Sbjct: 63 PLDASSS 69

[Close]

BLAST of CmaCh16G005600 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41)

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-17
Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          M+ SR  FG     ++IFAI LP+A  QS APAPAPTSDGT+IDQGIAYVLMLVAL LTY
Sbjct: 1  MSGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]

BLAST of CmaCh16G005600 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-16
Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 4  SRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH 63
          SR S    A  + +FA+ L +A  QSLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSSSF 72
            D SSS+
Sbjct: 63 PLDASSSY 70

[Close]

BLAST of CmaCh16G005600 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22)

HSP 1 Score: 73.2 bits (178), Expect = 7.4e-14
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MA  +     +A   +I  I LP+AQ  S +PAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

[Close]

BLAST of CmaCh16G005600 vs. NCBI nr
Match: gi|449464078|ref|XP_004149756.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADL 68
          LIHNADL
Sbjct: 61 LIHNADL 67

[Close]

BLAST of CmaCh16G005600 vs. NCBI nr
Match: gi|659102138|ref|XP_008451971.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 4.1e-22
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR+SF  +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADLSSS 71
          LIHNADLS++
Sbjct: 61 LIHNADLSNN 70

[Close]

BLAST of CmaCh16G005600 vs. NCBI nr
Match: gi|720033434|ref|XP_010266430.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-18
Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR SFG VA  ALIFA+ LP  Q QS+APAPAPTSDGTSIDQGIAYVLMLVAL LTY
Sbjct: 1  MAVSRVSFGVVAIVALIFAVALPAVQAQSVAPAPAPTSDGTSIDQGIAYVLMLVALVLTY 60

Query: 61 LIHNADLSS 70
          LIH  D SS
Sbjct: 61 LIHPLDASS 69

[Close]

BLAST of CmaCh16G005600 vs. NCBI nr
Match: gi|720017497|ref|XP_010261486.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera])

HSP 1 Score: 97.8 bits (242), Expect = 8.0e-18
Identity = 53/69 (76.81%), Postives = 56/69 (81.16%), Query Frame = 1


Query: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60
          MAVSR SFG +A  ALIF+I  P  Q QSLAPAPAPTSDGTSIDQG+AYVLMLVAL LTY
Sbjct: 1  MAVSRVSFGVMAIVALIFSIAFPAVQAQSLAPAPAPTSDGTSIDQGVAYVLMLVALVLTY 60

Query: 61 LIHNADLSS 70
          LIH  D SS
Sbjct: 61 LIHPLDASS 69

[Close]

BLAST of CmaCh16G005600 vs. NCBI nr
Match: gi|702338184|ref|XP_010055837.1| (PREDICTED: arabinogalactan peptide 22-like [Eucalyptus grandis])

HSP 1 Score: 95.1 bits (235), Expect = 5.2e-17
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 1  MAVSRTSFGFVAA-AALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALT 60
          M V R S G +AA AAL+ AI LP AQ QS APAPAP SDGTSIDQG+AYVLMLVAL LT
Sbjct: 1  MEVYRFSHGVLAAIAALVIAIALPTAQAQSRAPAPAPASDGTSIDQGVAYVLMLVALVLT 60

Query: 61 YLIHNADLSSSF 72
          YLIHNAD+SS+F
Sbjct: 61 YLIHNADISSTF 72

The following BLAST results are available for this feature:

BLAST of CmaCh16G005600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP20_ARATH	5.7e-16	67.16	Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1	[more]
AGP16_ARATH	2.8e-15	66.18	Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1	[more]
AGP22_ARATH	1.3e-12	63.49	Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1	[more]

BLAST of CmaCh16G005600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZS8_CUCSA	1.3e-22	89.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051380 PE=4 SV=1	[more]
A0A067JZA6_JATCU	4.7e-17	77.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1	[more]
A0A087GCU3_ARAAL	7.5e-15	69.84	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G416500 PE=4 SV=1	[more]
K3YVR2_SETIT	7.5e-15	66.20	Uncharacterized protein OS=Setaria italica GN=SETIT_018358mg PE=4 SV=1	[more]
B9RCN6_RICCO	7.5e-15	76.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691010 PE=4 SV=1	[more]

BLAST of CmaCh16G005600 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61640.1	3.2e-17	67.16	arabinogalactan protein 20	[more]
AT5G24105.1	7.2e-17	71.43	arabinogalactan protein 41	[more]
AT2G46330.1	1.6e-16	66.18	arabinogalactan protein 16	[more]
AT5G53250.1	7.4e-14	63.49	arabinogalactan protein 22	[more]

BLAST of CmaCh16G005600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464078\|ref\|XP_004149756.1\|	1.8e-22	89.55	PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus]	[more]
gi\|659102138\|ref\|XP_008451971.1\|	4.1e-22	85.71	PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]	[more]
gi\|720033434\|ref\|XP_010266430.1\|	1.2e-18	79.71	PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera]	[more]
gi\|720017497\|ref\|XP_010261486.1\|	8.0e-18	76.81	PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera]	[more]
gi\|702338184\|ref\|XP_010055837.1\|	5.2e-17	75.00	PREDICTED: arabinogalactan peptide 22-like [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009424	AGP16/20/22/41

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005600.1	CmaCh16G005600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009424	Arabinogalactan peptide, AGP	PFAM	PF06376	DUF1070	coord: 31..63 score: 1.8
None	No IPR available	PANTHER	PTHR33374	FAMILY NOT NAMED	coord: 1..71 score: 3.3
None	No IPR available	PANTHER	PTHR33374:SF6	ARABINOGALACTAN PEPTIDE 16-RELATED	coord: 1..71 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G005600	Cucsa.107210	Cucumber (Gy14) v1	cgycmaB0245
CmaCh16G005600	Cla010927	Watermelon (97103) v1	cmawmB310
CmaCh16G005600	Csa5G151510	Cucumber (Chinese Long) v2	cmacuB343
CmaCh16G005600	Csa4G051380	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G005600	ClCG07G014860	Watermelon (Charleston Gray)	cmawcgB303
CmaCh16G005600	CSPI05G04790	Wild cucumber (PI 183967)	cmacpiB347
CmaCh16G005600	CSPI04G06190	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G005600	CmoCh16G006090	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G005600	Lsi07G006990	Bottle gourd (USVL1VR-Ls)	cmalsiB325
CmaCh16G005600	Cp4.1LG01g00370	Cucurbita pepo (Zucchini)	cmacpeB350
CmaCh16G005600	Cp4.1LG14g02440	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G005600	MELO3C032818.2	Melon (DHL92) v3.6.1	cmamedB350
CmaCh16G005600	CsaV3_4G006390	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G005600	CsaV3_5G002200	Cucumber (Chinese Long) v3	cmacucB0404
CmaCh16G005600	Cla97C07G141780	Watermelon (97103) v2	cmawmbB353
CmaCh16G005600	Bhi01G002276	Wax gourd	cmawgoB0437
CmaCh16G005600	CsGy4G006110	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G005600	Carg22236	Silver-seed gourd	carcmaB0825
CmaCh16G005600	Carg21266	Silver-seed gourd	carcmaB0506
CmaCh16G005600	Carg13053	Silver-seed gourd	carcmaB0054

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G005600	CmaCh04G007060	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G005600	Bottle gourd (USVL1VR-Ls)	cmalsiB300
CmaCh16G005600	Bottle gourd (USVL1VR-Ls)	cmalsiB321
CmaCh16G005600	Cucumber (Gy14) v2	cgybcmaB338
CmaCh16G005600	Cucumber (Gy14) v2	cgybcmaB620
CmaCh16G005600	Melon (DHL92) v3.6.1	cmamedB328
CmaCh16G005600	Melon (DHL92) v3.6.1	cmamedB341
CmaCh16G005600	Cucumber (Chinese Long) v3	cmacucB0379
CmaCh16G005600	Cucumber (Chinese Long) v3	cmacucB0407
CmaCh16G005600	Watermelon (97103) v2	cmawmbB326
CmaCh16G005600	Watermelon (97103) v2	cmawmbB345
CmaCh16G005600	Wax gourd	cmawgoB0427
CmaCh16G005600	Cucurbita maxima (Rimu)	cmacmaB302
CmaCh16G005600	Cucumber (Gy14) v1	cgycmaB0831
CmaCh16G005600	Cucurbita moschata (Rifu)	cmacmoB320
CmaCh16G005600	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G005600	Melon (DHL92) v3.5.1	cmameB284
CmaCh16G005600	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G005600	Watermelon (Charleston Gray)	cmawcgB290
CmaCh16G005600	Watermelon (97103) v1	cmawmB319