CmoCh17G013580 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G013580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Humj1 family protein
Location	Cmo_Chr17 : 10568259 .. 10569436 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGCTCTCAGCTGCCCCCTCAGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGGATCACCACTACCGCCTTTCGTTTTCTGTGTTCTGCGTCTTAATTTTCATTGATTCAACTCTCACTTCTCTCGCTTTGTTTCTCTTTGTCTTTTTCTCTCTTGTTCCAGCTTCTGATTCTTTCGTTTTTTTTTTTTTTCCCTCTTCTTAGCCTGCCTTCATTTATTGCGAAAGGGCGCATATGGCAGATCTTTGGAAATTCTGTTGTCTTGTACTTTTGTTTAATTTTCTGATGATTGTGTGTTCGAGAGGGAGCTTTCGTTTCGATCTTTAATTAATGCGTTTCTGAATCCATAAATTTGTCTTTATGATTAATGCCTTGCTTTCTAAATTCTCTCTCCCTCCCATACGGACTCCATCCGCCCTTCCCAGGATTCGGATTCCAAACCCTAGAATTAATTAATTTCATACTTCCTTTTATCGTCCGCCATTTTCAGTTTTCTTTTCGTACGACCTCAGAAAAAGCTTTCTGGATTTCGGATTCCCTTGCCTTTCTTTCGTTCTTTCTTTTGTTTCTTCTGTTTCATTTTCTCCTCGGGAACACTAAATTAACTTTTCCATTCTATTCCGTTTGACTCACTAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGAGAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAA

mRNA sequence

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGCTCTCAGCTGCCCCCTCAGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGAGAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAA

Coding sequence (CDS)

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGCTCTCAGCTGCCCCCTCAGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGAGAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAA

Homology

[Close]

BLAST of CmoCh17G013580 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.2e-88
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPS-AGVRRS-----SSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAPS AGVRRS     SSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDENDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           DD  D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh17G013580 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-44
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHH--RF 60
           M +P+MAA+T SLE+S +  SLNH        AG R  SSSS  A+    P  Q+H    
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGER--SSSSDDAEVEGAPTEQNHMPNS 60

Query: 61  DTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDEN 120
           DTTLELNSHISLP  WEQCLDLKTGE+YY N R GM+  EDPR  + ++ D YSEDD   
Sbjct: 61  DTTLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVKQEYNGDFYSEDDSSY 120

Query: 121 DADESSSDDGSEESCSSSSYGASRQQYPPGKEED-VLVVAGCKRCFMYFMVPKQVEDCPK 180
           D++ESSS+        SS   +SR+ Y   ++ED VLVVAGCK C MYFMVPKQVEDCPK
Sbjct: 121 DSEESSSE--------SSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDCPK 180

Query: 181 CSSSRLVHFDRSEDSNGFP 197
           C + +L+HFDRSE  NG P
Sbjct: 181 C-NGQLLHFDRSE--NGSP 186

[Close]

BLAST of CmoCh17G013580 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-42
Identity = 105/198 (53.03%), Postives = 129/198 (65.15%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           M +P+MAA+T SLE+S +  SLNH     +      RSSSS  +  + HL  N     DT
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNS----DT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDENDA 120
           +LEL SH+SLP  WEQCLDLKTGE+YY N R GM+  EDPR  + ++ D YSEDD   D+
Sbjct: 61  SLELKSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAREDPRITQDYNGDFYSEDDSSYDS 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPP--GKEEDVLVVAGCKRCFMYFMVPKQVEDCPKC 180
           +ESSS+         SS  +SR+ +     KE+ VLVVAGCK CFMYFMVPKQVEDCPKC
Sbjct: 121 EESSSE---------SSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC 180

Query: 181 SSSRLVHFDRSEDSNGFP 197
              +L+HFDRSE  NG P
Sbjct: 181 -DGQLLHFDRSE--NGSP 182

[Close]

BLAST of CmoCh17G013580 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-40
Identity = 108/204 (52.94%), Postives = 131/204 (64.22%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGV------RRSSSSSSSADERHLPLNQ 60
           M +P+MAA+T SLE+S +  SLNH       S+G+       RSSSS     + HL  N 
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHH--HHHQSSGILDGGREERSSSSDELDSQNHLQQNS 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
               DT+LEL SH+SLP  WEQCLDLKTGEVYY N R GM+  EDPR  + ++ D YSED
Sbjct: 61  ----DTSLELKSHLSLPYHWEQCLDLKTGEVYYINWRNGMKAREDPRITQEYNGDFYSED 120

Query: 121 DDENDADESSSDDGSEESCSSSSYGASRQQYPP--GKEEDVLVVAGCKRCFMYFMVPKQV 180
           D   D++ESSS+         SS  +SR+ Y     KE+ VLVVAGCK CFMYFMVPKQV
Sbjct: 121 DSSYDSEESSSE---------SSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQV 180

Query: 181 EDCPKCSSSRLVHFDRSEDSNGFP 197
           E CPKC + +L+HFDRSE  NG P
Sbjct: 181 EVCPKC-NGQLLHFDRSE--NGSP 186

[Close]

BLAST of CmoCh17G013580 vs. TrEMBL
Match: A0A061E5U3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008431 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 107/209 (51.20%), Postives = 134/209 (64.11%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAG-----VRRSSSSSSSADERHLPLNQH 60
           M +P+M  +T SLE+S +  SLNH   S+    G     +RRSS+S    D+ +LP    
Sbjct: 1   MTAPNMETITASLERSLQNCSLNHERRSSRSGGGGEQGIIRRSSTS----DDNNLPTTVS 60

Query: 61  HRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDD 120
              DT+LELNSH+SLP  WEQCLDLKTGE+YY N R GM+  EDPRTA  +S D YSE++
Sbjct: 61  ---DTSLELNSHLSLPYHWEQCLDLKTGEIYYINWRDGMKAKEDPRTAAEYSGDFYSEEE 120

Query: 121 DENDADESSSDDGSEESCSSSSYGA-SRQQYPPGK----------EEDVLVVAGCKRCFM 180
           +E D D+SS D  SEES S SS  +  R  Y              +++VLVVAGCK C M
Sbjct: 121 EEEDDDDSSYD--SEESSSESSPSSRERAHYNNNNNNNHHRVEKDKDNVLVVAGCKSCLM 180

Query: 181 YFMVPKQVEDCPKCSSSRLVHFDRSEDSN 194
           YFMVPKQVEDCPKC + +L+HFDRS  S+
Sbjct: 181 YFMVPKQVEDCPKC-NGQLLHFDRSGSSS 199

[Close]

BLAST of CmoCh17G013580 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33
Identity = 97/215 (45.12%), Postives = 121/215 (56.28%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MK+P+M  +T+SLE+S    SLN R        G  RSSS+     E   P++     D 
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGD-GFGRSSSN-----EHMTPIS-----DR 60

Query: 61  TLELNSHISLPPFWEQCLDLK---------------TGEVYYRNCRTGMRVTEDPR---T 120
           TLELNSH+SLP  WEQCLDLK               TGE+YY N + GMRV EDPR    
Sbjct: 61  TLELNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMN 120

Query: 121 AEAHSRDLYSEDDDENDADESSSDDGSEESCSSSSYG----ASRQQYPPGKEEDVLVVAG 180
           A+  S D Y     E D+    S++ S ES  SS          ++    +EEDVLVVAG
Sbjct: 121 ADPDSGDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAG 180

Query: 181 CKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSEDSN 194
           CK CFMYFMVPK VEDCPKC +++L+HFDR   ++
Sbjct: 181 CKACFMYFMVPKLVEDCPKC-AAQLLHFDRPHSAS 203

[Close]

BLAST of CmoCh17G013580 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-28
Identity = 84/189 (44.44%), Postives = 114/189 (60.32%), Query Frame = 1


Query: 6   MAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDTTLELN 65
           MA +T+ LE+S +  SL  R          R S        + H+P++     D  LEL+
Sbjct: 1   MADITEYLERSMQNCSLIDR----------RSSMGDGFGMSDEHIPIS-----DRFLELS 60

Query: 66  SHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDEN------D 125
           SH S+P   EQCLDLKTGE+YYR+  +GMRV EDPR  ++ SR  Y++            
Sbjct: 61  SHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPR--KSMSRGNYADQSSGESSGTVFS 120

Query: 126 ADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 185
           ++E SS   SEES S SS  +SR+ +   ++EDVLVVAGCK C MYFMVPK  +DCPKC 
Sbjct: 121 SEEVSSYYESEESSSESS-PSSRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC- 170

Query: 186 SSRLVHFDR 189
           +++L+HFD+
Sbjct: 181 ATQLLHFDQ 170

[Close]

BLAST of CmoCh17G013580 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-87
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPS-AGVRRS-----SSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAPS AGVRRS     SSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDENDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           DD  D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh17G013580 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 4.5e-87
Identity = 175/202 (86.63%), Postives = 180/202 (89.11%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPS-AGVRRS-----SSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAPS AGVRRS     SSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLYSED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSED 120

Query: 121 DDENDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           D E D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DGE-DGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of CmoCh17G013580 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas])

HSP 1 Score: 186.4 bits (472), Expect = 4.7e-44
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHH--RF 60
           M +P+MAA+T SLE+S +  SLNH        AG R  SSSS  A+    P  Q+H    
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGER--SSSSDDAEVEGAPTEQNHMPNS 60

Query: 61  DTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDEN 120
           DTTLELNSHISLP  WEQCLDLKTGE+YY N R GM+  EDPR  + ++ D YSEDD   
Sbjct: 61  DTTLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVKQEYNGDFYSEDDSSY 120

Query: 121 DADESSSDDGSEESCSSSSYGASRQQYPPGKEED-VLVVAGCKRCFMYFMVPKQVEDCPK 180
           D++ESSS+        SS   +SR+ Y   ++ED VLVVAGCK C MYFMVPKQVEDCPK
Sbjct: 121 DSEESSSE--------SSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDCPK 180

Query: 181 CSSSRLVHFDRSEDSNGFP 197
           C + +L+HFDRSE  NG P
Sbjct: 181 C-NGQLLHFDRSE--NGSP 186

[Close]

BLAST of CmoCh17G013580 vs. NCBI nr
Match: gi|566163012|ref|XP_002304657.2| (Humj1 family protein [Populus trichocarpa])

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 105/198 (53.03%), Postives = 129/198 (65.15%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           M +P+MAA+T SLE+S +  SLNH     +      RSSSS  +  + HL  N     DT
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNS----DT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDENDA 120
           +LEL SH+SLP  WEQCLDLKTGE+YY N R GM+  EDPR  + ++ D YSEDD   D+
Sbjct: 61  SLELKSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAREDPRITQDYNGDFYSEDDSSYDS 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPP--GKEEDVLVVAGCKRCFMYFMVPKQVEDCPKC 180
           +ESSS+         SS  +SR+ +     KE+ VLVVAGCK CFMYFMVPKQVEDCPKC
Sbjct: 121 EESSSE---------SSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC 180

Query: 181 SSSRLVHFDRSEDSNGFP 197
              +L+HFDRSE  NG P
Sbjct: 181 -DGQLLHFDRSE--NGSP 182

[Close]

BLAST of CmoCh17G013580 vs. NCBI nr
Match: gi|743819244|ref|XP_011020835.1| (PREDICTED: uncharacterized protein LOC105123067 [Populus euphratica])

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 103/198 (52.02%), Postives = 128/198 (64.65%), Query Frame = 1


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           M +P+MAA+T SLE+S +  SLNH     +      RSSSS  +  + H   N     DT
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHRQSSGGREERSSSSDETVSQNHSLQNS----DT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDENDA 120
           +LEL SH+SLP  WEQCLDLKTGE+YY N R G++  EDPR  + ++ D YSEDD   D+
Sbjct: 61  SLELKSHLSLPYHWEQCLDLKTGEIYYINWRNGIKAREDPRITQDYNGDFYSEDDSSYDS 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPP--GKEEDVLVVAGCKRCFMYFMVPKQVEDCPKC 180
           +ESSS+         SS  +SR+ +     KE+ VLVVAGCK CFMYFMVPKQVEDCPKC
Sbjct: 121 EESSSE---------SSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC 180

Query: 181 SSSRLVHFDRSEDSNGFP 197
              +L+HFDRSE  NG P
Sbjct: 181 -DGQLLHFDRSE--NGSP 182

The following BLAST results are available for this feature:

BLAST of CmoCh17G013580 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G013580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF89_CUCSA	8.2e-88	86.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1	[more]
A0A067JTH2_JATCU	3.3e-44	55.78	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1	[more]
B9GZB4_POPTR	8.9e-42	53.03	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2	[more]
A9PEE5_POPTR	2.9e-40	52.94	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1	[more]
A0A061E5U3_THECC	1.1e-39	51.20	Uncharacterized protein OS=Theobroma cacao GN=TCM_008431 PE=4 SV=1	[more]

BLAST of CmoCh17G013580 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	1.0e-33	45.12	unknown protein	[more]
AT1G28070.1	1.0e-28	44.44	unknown protein	[more]

BLAST of CmoCh17G013580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445588\|ref\|XP_004140554.1\|	1.2e-87	86.14	PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus]	[more]
gi\|659119898\|ref\|XP_008459902.1\|	4.5e-87	86.63	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
gi\|802754658\|ref\|XP_012088745.1\|	4.7e-44	55.78	PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]	[more]
gi\|566163012\|ref\|XP_002304657.2\|	1.3e-41	53.03	Humj1 family protein [Populus trichocarpa]	[more]
gi\|743819244\|ref\|XP_011020835.1\|	1.1e-40	52.02	PREDICTED: uncharacterized protein LOC105123067 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013580.1	CmoCh17G013580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 66..102 score: 3.7
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 64..102 score: 8.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 1..196 score: 3.4
None	No IPR available	PANTHER	PTHR14791:SF27	SUBFAMILY NOT NAMED	coord: 1..196 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G013580	Cucsa.349290	Cucumber (Gy14) v1	cgycmoB0951
CmoCh17G013580	CmaCh17G014110	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G013580	Cla001488	Watermelon (97103) v1	cmowmB347
CmoCh17G013580	Csa6G091940	Cucumber (Chinese Long) v2	cmocuB358
CmoCh17G013580	MELO3C022347	Melon (DHL92) v3.5.1	cmomeB308
CmoCh17G013580	ClCG06G001810	Watermelon (Charleston Gray)	cmowcgB318
CmoCh17G013580	CSPI06G07450	Wild cucumber (PI 183967)	cmocpiB361
CmoCh17G013580	Lsi09G017610	Bottle gourd (USVL1VR-Ls)	cmolsiB322
CmoCh17G013580	Cp4.1LG17g09230	Cucurbita pepo (Zucchini)	cmocpeB352
CmoCh17G013580	Cp4.1LG12g09920	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G013580	Cp4.1LG08g06480	Cucurbita pepo (Zucchini)	cmocpeB372
CmoCh17G013580	MELO3C022347.2	Melon (DHL92) v3.6.1	cmomedB353
CmoCh17G013580	CsaV3_6G007850	Cucumber (Chinese Long) v3	cmocucB0433
CmoCh17G013580	Cla97C06G111110	Watermelon (97103) v2	cmowmbB354
CmoCh17G013580	Bhi01G002890	Wax gourd	cmowgoB0479
CmoCh17G013580	Bhi12G002136	Wax gourd	cmowgoB0456
CmoCh17G013580	CsGy6G007470	Cucumber (Gy14) v2	cgybcmoB734
CmoCh17G013580	Carg11570	Silver-seed gourd	carcmoB0021
CmoCh17G013580	Carg03813	Silver-seed gourd	carcmoB1312

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G013580	CmoCh08G000190	Cucurbita moschata (Rifu)	cmocmoB322

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G013580	Cucurbita maxima (Rimu)	cmacmoB899