Cla97C06G111110 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G111110
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ATP-dependent RNA helicase
Location	Cla97Chr06 : 1764697 .. 1765904 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGAATCACCATTACCGCCTTGCTTTTTCCTTTATTTTATTTTGTTTTGTTTTATTTGTTATGTGTTTTCGGTGTTTAATTAATTTGAATACCGAGTTCTCTTCTCTCCCTTTGATTTTCTTTGTCTTTTTCTCTCTTGATCCAGCTTCCGATTCCTTCGTTTTTTTCTTTCCTCTTCTTAACCTAACTTCATTTATTGCCAAAGGCCGCATATGGCAGATCTTTGCAAATTCTGTTGTCTTGTACTTTTGATTATTAATCTTTTTGATGATTGTTTCAGATGGAGCTTTCGTTTCTTTCTTTAATTAATGCGTTTCTGTATCCATATATTTGTCTTTATGATTAATGTTTTCCTTTTTCCATACATACTTCATCTTAGGATTCGGATTCCAAACCCTAGAATTAATTAATTTCATACTTGCTTTTATCGTCCGCCATTTTTCACTTCTCTTTTCGTACAACGCATCAGAGAGAAACTTTCTGGATTTTGGATTCTCCATTTCCTTTCGGTTTTTTCTCTTTTCTTTTGTTTCGATTTCTCCTCGGGAACATTAAATTAACATTTCGATTCAATTCCGTTTGGCTTTCTAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGA

mRNA sequence

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGA

Coding sequence (CDS)

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGA

Protein sequence

MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHLPLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLYSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSDDNNGFP

Homology

[Close]

BLAST of Cla97C06G111110 vs. NCBI nr
Match: XP_004140554.1 (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical protein Csa_6G091940 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAP    XXXXXXXXXXXXXXXXXXXXXX HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAP----XXXXXXXXXXXXXXXXXXXXXXPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK 180
           Y E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Cla97C06G111110 vs. NCBI nr
Match: XP_016902460.1 (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAP    XXXXXXXXXXXXXXXXXXXXXX HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAP----XXXXXXXXXXXXXXXXXXXXXXPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDD 200
           VEDCPKCSSSRLVHFDRSD+
Sbjct: 181 VEDCPKCSSSRLVHFDRSDE 196

[Close]

BLAST of Cla97C06G111110 vs. NCBI nr
Match: XP_022953156.1 (uncharacterized protein LOC111455780 [Cucurbita moschata])

HSP 1 Score: 234.6 bits (597), Expect = 3.0e-58
Identity = 165/206 (80.10%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFR F+LNHRL SAAP               XXXXXXXXX   HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAP----------SAGVRXXXXXXXXXDERHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QH+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAHSRDL
Sbjct: 61  PLNQHHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDL 120

Query: 121 YS-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK 180
           YS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           VAGCKRCFMYFMVPK
Sbjct: 121 YSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSEDSNGFP 196

[Close]

BLAST of Cla97C06G111110 vs. NCBI nr
Match: XP_023547639.1 (uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.6 bits (553), Expect = 3.8e-53
Identity = 157/201 (78.11%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 6   MAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPL-QH 65
           MAAVTDSLEQSFR F+LNHRL SA P               XXXXXXXXX   HL L QH
Sbjct: 1   MAAVTDSLEQSFRTFSLNHRLVSAPP----------SAGVRXXXXXXXXXDQRHLSLNQH 60

Query: 66  NRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLYS-EX 125
           +RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAHSRDLYS  X
Sbjct: 61  HRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSXXX 120

Query: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVEDC 185
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            AGCKRCFMYFMVPKQVEDC
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCKRCFMYFMVPKQVEDC 180

Query: 186 PKCSSSRLVHFDRSDDNNGFP 205
           PKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 PKCSSSRLVHFDRSEDSNGFP 191

[Close]

BLAST of Cla97C06G111110 vs. NCBI nr
Match: XP_022991817.1 (uncharacterized protein LOC111488350 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 2.5e-52
Identity = 160/205 (78.05%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFR F+LNHRL S AP             XXXXXXXXXXXXXX  
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAP--------SAGVRXXXXXXXXXXXXXXXX 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLY 120
                 FDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAH RDLY
Sbjct: 61  XXXXXXFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRDLY 120

Query: 121 S-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            AGCKRCFMYFMVPKQ
Sbjct: 121 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDDNNGFP 205
           VEDCPKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 VEDCPKCSSSRLVHFDRSEDSNGFP 197

[Close]

BLAST of Cla97C06G111110 vs. TrEMBL
Match: tr|A0A0A0KF89|A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 8.2e-68
Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAP    XXXXXXXXXXXXXXXXXXXXXX HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAP----XXXXXXXXXXXXXXXXXXXXXXPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK 180
           Y E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Cla97C06G111110 vs. TrEMBL
Match: tr|A0A1S4E3A8|A0A1S4E3A8_CUCME (uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.9e-67
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAP    XXXXXXXXXXXXXXXXXXXXXX HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAP----XXXXXXXXXXXXXXXXXXXXXXPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDD 200
           VEDCPKCSSSRLVHFDRSD+
Sbjct: 181 VEDCPKCSSSRLVHFDRSDE 196

[Close]

BLAST of Cla97C06G111110 vs. TrEMBL
Match: tr|A0A2N9I3E3|A0A2N9I3E3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47084 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.4e-32
Identity = 112/204 (54.90%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           M  P+MA +T SLE+SF+N +LN +  S +         XXXXXXXXXXXXXXXX   HL
Sbjct: 1   MSGPNMATITASLERSFQNCSLNQQTRSGS------GSRXXXXXXXXXXXXXXXXPDNHL 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLY 120
           P      +T LELNS+ISLP  WEQCLDLKTGE+YY N R GM+ K+DPRT   +S D Y
Sbjct: 61  PSS----ETTLELNSNISLPYHWEQCLDLKTGEIYYINWRNGMKAKDDPRTTAEYSGDFY 120

Query: 121 SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQV 180
           SE     XXXXXXXXX                   ++ + VLVVAGCK C MYFMVPKQV
Sbjct: 121 SEDDSSCXXXXXXXXXSPAPISSREQHYRVD--QKDHKDHVLVVAGCKSCLMYFMVPKQV 180

Query: 181 EDCPKCSSSRLVHFDRSDDNNGFP 205
           EDCPKC   +L+HFDRS+  NG P
Sbjct: 181 EDCPKC-CGQLLHFDRSE--NGSP 189

[Close]

BLAST of Cla97C06G111110 vs. TrEMBL
Match: tr|A0A2C9VF41|A0A2C9VF41_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G103100 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 126/204 (61.76%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           M  P+MA +T SLE+S +N +LNH  +          XXXXXXXXXXXXXXX       L
Sbjct: 1   MTPPNMATITASLERSLQNCSLNHHRSRGVLGVGERTXXXXXXXXXXXXXXXVPQQNHLL 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLY 120
           P      DT LELNSH+SLP  WEQCLDLKTGE+YY N R GM+ KEDPR V  ++ D Y
Sbjct: 61  PTS----DTTLELNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-VTQYNGDFY 120

Query: 121 SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQV 180
           S       XXXXXXXXXXXXXXXXXXXXXXXXY  +    VLVVAGCK CFMYFMVPKQV
Sbjct: 121 S-------XXXXXXXXXXXXXXXXXXXXXXXXYRVQRENHVLVVAGCKSCFMYFMVPKQV 180

Query: 181 EDCPKCSSSRLVHFDRSDDNNGFP 205
           EDCPKC + +L+HFDRS+  NG P
Sbjct: 181 EDCPKC-NGQLLHFDRSE--NGSP 189

[Close]

BLAST of Cla97C06G111110 vs. TrEMBL
Match: tr|A0A067JTH2|A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.7e-31
Identity = 111/204 (54.41%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           M +P+MAA+T SLE+S +N +LNH  +                               H+
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGV-----LGAGERSSSSDDAEVEGAPTEQNHM 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLY 120
           P      DT LELNSHISLP  WEQCLDLKTGE+YY N R GM+ KEDPR  + ++ D Y
Sbjct: 61  P----NSDTTLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVKQEYNGDFY 120

Query: 121 SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQV 180
           S      XXXXXXXXXXXXXXXXXXXXXXXXX        VLVVAGCK C MYFMVPKQV
Sbjct: 121 S------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLVVAGCKSCLMYFMVPKQV 180

Query: 181 EDCPKCSSSRLVHFDRSDDNNGFP 205
           EDCPKC + +L+HFDRS+  NG P
Sbjct: 181 EDCPKC-NGQLLHFDRSE--NGSP 186

[Close]

BLAST of Cla97C06G111110 vs. TAIR10
Match: AT2G33510.2 (unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-23
Identity = 106/220 (48.18%), Postives = 122/220 (55.45%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHL 60
           MK+P+M  +T+SLE+S  N +LN R                                 H+
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVV-----------------GDGFGRSSSNEHM 60

Query: 61  -PLQHNRFDTILELNSHISLPPFWEQCLDLK---------------TGEVYYRNCRTGMR 120
            P+     D  LELNSH+SLP  WEQCLDLK               TGE+YY N + GMR
Sbjct: 61  TPIS----DRTLELNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMR 120

Query: 121 VKEDPRTV---EAHSRDLYS-----EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAE 180
           VKEDPR V   +  S D Y       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 121 VKEDPRKVMNADPDSGDSYGTVCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 NVEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDR 197
                    GCK CFMYFMVPK VEDCPKC +++L+HFDR
Sbjct: 181 XXXXXXXXXGCKACFMYFMVPKLVEDCPKC-AAQLLHFDR 198

[Close]

BLAST of Cla97C06G111110 vs. TAIR10
Match: AT1G28070.1 (unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 95/197 (48.22%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 6   MAAVTDSLEQSFRNFTLNHRLASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPLQHN 65
           MA +T+ LE+S +N +L  R +S                              H+P+   
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMG--------------------DGFGMSDEHIPIS-- 60

Query: 66  RFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLYSE--- 125
             D  LEL+SH S+P   EQCLDLKTGE+YYR+  +GMRVKEDPR  ++ SR  Y++   
Sbjct: 61  --DRFLELSSHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPR--KSMSRGNYADQSS 120

Query: 126 ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQ 185
              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             GCK C MYFMVPK 
Sbjct: 121 GESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCKACLMYFMVPKL 170

Query: 186 VEDCPKCSSSRLVHFDR 197
            +DCPKC +++L+HFD+
Sbjct: 181 FKDCPKC-ATQLLHFDQ 170

The following BLAST results are available for this feature:

BLAST of Cla97C06G111110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140554.1	1.2e-67	92.72	PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hy...	[more]
XP_016902460.1	1.0e-66	93.50	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
XP_022953156.1	3.0e-58	80.10	uncharacterized protein LOC111455780 [Cucurbita moschata]	[more]
XP_023547639.1	3.8e-53	78.11	uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo]	[more]
XP_022991817.1	2.5e-52	78.05	uncharacterized protein LOC111488350 [Cucurbita maxima]	[more]

BLAST of Cla97C06G111110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KF89\|A0A0A0KF89_CUCSA	8.2e-68	92.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1	[more]
tr\|A0A1S4E3A8\|A0A1S4E3A8_CUCME	6.9e-67	93.50	uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=...	[more]
tr\|A0A2N9I3E3\|A0A2N9I3E3_FAGSY	9.4e-32	54.90	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47084 PE=4 SV=1	[more]
tr\|A0A2C9VF41\|A0A2C9VF41_MANES	2.7e-31	61.76	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G103100 PE=4 SV=...	[more]
tr\|A0A067JTH2\|A0A067JTH2_JATCU	4.7e-31	54.41	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23118 PE=4 SV=1	[more]

BLAST of Cla97C06G111110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G111110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	3.9e-23	48.18	unknown protein	[more]
AT1G28070.1	1.8e-20	48.22	unknown protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036020	WW_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G111110.1	Cla97C06G111110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 77..115 e-value: 7.4E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..153
None	No IPR available	PANTHER	PTHR14791:SF29	PROTEIN KIBRA	coord: 30..117 coord: 132..196
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 30..117 coord: 132..196
IPR036020	WW domain superfamily	SUPERFAMILY	SSF51045	WW domain	coord: 75..111

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G111110	Cla001488	Watermelon (97103) v1	wmwmbB407
Cla97C06G111110	Csa6G091940	Cucumber (Chinese Long) v2	cuwmbB468
Cla97C06G111110	MELO3C022347	Melon (DHL92) v3.5.1	mewmbB127
Cla97C06G111110	ClCG06G001810	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G111110	CSPI06G07450	Wild cucumber (PI 183967)	cpiwmbB495
Cla97C06G111110	Cucsa.349290	Cucumber (Gy14) v1	cgywmbB596
Cla97C06G111110	CmaCh17G014110	Cucurbita maxima (Rimu)	cmawmbB369
Cla97C06G111110	CmoCh17G013580	Cucurbita moschata (Rifu)	cmowmbB354
Cla97C06G111110	CmoCh08G000190	Cucurbita moschata (Rifu)	cmowmbB897
Cla97C06G111110	Lsi09G017610	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G111110	CsGy6G007470	Cucumber (Gy14) v2	cgybwmbB446
Cla97C06G111110	MELO3C022347.2	Melon (DHL92) v3.6.1	medwmbB118
Cla97C06G111110	Carg11570	Silver-seed gourd	carwmbB0011
Cla97C06G111110	Carg15429	Silver-seed gourd	carwmbB0721
Cla97C06G111110	Carg03813	Silver-seed gourd	carwmbB1032
Cla97C06G111110	CsaV3_6G007850	Cucumber (Chinese Long) v3	cucwmbB487
Cla97C06G111110	Bhi12G002136	Wax gourd	wgowmbB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G111110	Cucurbita maxima (Rimu)	cmawmbB922
Cla97C06G111110	Cucurbita moschata (Rifu)	cmowmbB122