CmoCh08G000190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G000190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Humj1 family protein
Location	Cmo_Chr08 : 98637 .. 100328 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGGTCAGTGTAACCATTCTCGCCTCGCTTTTCATTTTGTGTCTAATTTGCGTCTGCTTAGTTAATTCAACGCCAACTTCTCCTTTTTCCTTTTTCTTCTCCTCTTCTAACCTAGCTTCATTTAATGCCAAAGCCGCATATGGCAGATCTCTGGAAATTCTGTTGCCTTGTACTTTTCATTAATTTTATGATGATTGTCGGAGAGAAAGCTTTGGGTTTCATCTTTAATGACTTTCTCATCCCATTAATTTGCCTTTATCATTTGCTTTCTTTGTTTCTTTCCTTCCTCCCACCCGGAATCGAAACCCTAGAATTAATTAATTTCACACCTCCTTTATCGTCCGCCATTTTTCGCTTCTCTTTTCGTACGACAGATCAGAAACAGCTTTCTGGATTTTGGACCCCTGCCTCTTTCATTTTTTTTTATTTTTTTCTTTCCAATTTTCAATAAACTTTTGCGATTCAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

mRNA sequence

CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

Coding sequence (CDS)

ATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGA

Homology

[Close]

BLAST of CmoCh08G000190 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.6e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh08G000190 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190 vs. TrEMBL
Match: B9RFX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 98/208 (47.12%), Postives = 122/208 (58.65%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS---------SSSSSSSSFLDHEQRHHQLH--- 60
           M +P+ A  T SL+ S +  SLNH  +          SSSS  + F   +Q+  Q H   
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHHQSRGVLGGAGERSSSSDDADFGAAQQQEDQNHNNN 60

Query: 61  -----------TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRM 120
                      TTL+LNSH+SLP  WEQCL LK      TGE+YY N R GM+ KEDPR+
Sbjct: 61  LNLPTSNSSTDTTLELNSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRV 120

Query: 121 AKDLYSEDDDDDDESSSDEGSEESCSSSSYSGSRQQYP---RENEEEVLVVAGCKRCFMY 180
            ++ YS D   +DESS D  SEES S SS   SR+ Y     + E+ VLVVAGCK C MY
Sbjct: 121 TQE-YSGDYYSEDESSYD--SEESSSESSPPSSREHYTSRGEQKEDHVLVVAGCKSCLMY 180

Query: 181 FMVPKQVEGCPKCSSSRLVHFDRTHDNN 183
           FMVPKQVE CPKC + +L+HFDR+ D +
Sbjct: 181 FMVPKQVEDCPKC-NGQLLHFDRSEDGS 198

[Close]

BLAST of CmoCh08G000190 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSS----SSSFLDHEQRHHQLH---TTLDL 60
           M +P+ AA T SL+ S +  SLNH     SS      SSS  + + ++H L    T+L+L
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNSDTSLEL 60

Query: 61  NSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDDESS 120
            SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ +D Y+ D   +D+SS
Sbjct: 61  KSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQD-YNGDFYSEDDSS 120

Query: 121 SDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSR 180
            D  SEES S SS   SR+ +    E E+ VLVVAGCK CFMYFMVPKQVE CPKC   +
Sbjct: 121 YD--SEESSSESSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC-DGQ 180

Query: 181 LVHFDRTHDNNGFP 186
           L+HFDR+   NG P
Sbjct: 181 LLHFDRS--ENGSP 182

[Close]

BLAST of CmoCh08G000190 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-31
Identity = 91/202 (45.05%), Postives = 111/202 (54.95%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLP 60
           MK+P+    T SL+ S    SLN R              +E        TL+LNSH+SLP
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDRTLELNSHLSLP 60

Query: 61  PFWEQCLHLKFRSV---------FQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD--- 120
             WEQCL LK + +         F+TGE+YY N + GMRVKEDPR   +   +  D    
Sbjct: 61  CHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGT 120

Query: 121 --DDESSSDEGSEESCSSSSYSGSRQQYPRENEEE---------VLVVAGCKRCFMYFMV 180
              +E SS   SEES S SS S SR+ +  E EEE         VLVVAGCK CFMYFMV
Sbjct: 121 VCSEEDSSYYDSEESSSESSPS-SRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMV 180

[Close]

BLAST of CmoCh08G000190 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 78/186 (41.94%), Postives = 105/186 (56.45%), Query Frame = 1


Query: 7   AATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLPPFWEQC 66
           A  T  L+ S +  SL  R     SS    F   ++        L+L+SH S+P   EQC
Sbjct: 2   ADITEYLERSMQNCSLIDR----RSSMGDGFGMSDEHIPISDRFLELSSHFSVPSHLEQC 61

Query: 67  LHLKFRSVFQTGEVYYTNCRTGMRVKEDPR--MAKDLYSEDDDDD--------DESSSDE 126
           L LK      TGE+YY +  +GMRVKEDPR  M++  Y++    +        +E SS  
Sbjct: 62  LDLK------TGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSSYY 121

Query: 127 GSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVHFD 183
            SEES S SS S SR+ +  E +E+VLVVAGCK C MYFMVPK  + CPKC +++L+HFD
Sbjct: 122 ESEESSSESSPS-SRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC-ATQLLHFD 175

[Close]

BLAST of CmoCh08G000190 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 143/207 (69.08%), Postives = 156/207 (75.36%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDDDD-DESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVP 180
           DLYSEDD +D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMVP
Sbjct: 121 DLYSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVP 180

Query: 181 KQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           KQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 KQVEDCPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of CmoCh08G000190 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh08G000190 vs. NCBI nr
Match: gi|743880238|ref|XP_011036150.1| (PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 101/203 (49.75%), Postives = 122/203 (60.10%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILGGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKD----LYSE 120
           T+L+L SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ ++     YSE
Sbjct: 61  TSLELKSHVSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQEYNGGFYSE 120

Query: 121 DDDDDDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVE 180
           DD   D       SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE
Sbjct: 121 DDSSYD-------SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVE 180

Query: 181 GCPKCSSSRLVHFDRTHDNNGFP 186
            CPKC + +L+HFDR+   NG P
Sbjct: 181 VCPKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190 vs. NCBI nr
Match: gi|224053539|ref|XP_002297863.1| (Humj1 family protein [Populus trichocarpa])

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

The following BLAST results are available for this feature:

BLAST of CmoCh08G000190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF89_CUCSA	6.6e-63	68.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1	[more]
A0A067JTH2_JATCU	1.0e-31	49.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1	[more]
A9PEE5_POPTR	1.8e-31	51.26	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1	[more]
B9RFX1_RICCO	3.0e-31	47.12	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1	[more]
B9GZB4_POPTR	3.0e-31	50.00	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2	[more]

BLAST of CmoCh08G000190 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	4.6e-31	45.05	unknown protein	[more]
AT1G28070.1	3.0e-22	41.94	unknown protein	[more]

BLAST of CmoCh08G000190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119898\|ref\|XP_008459902.1\|	4.3e-63	69.08	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
gi\|449445588\|ref\|XP_004140554.1\|	9.5e-63	68.75	PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus]	[more]
gi\|743880238\|ref\|XP_011036150.1\|	1.1e-31	49.75	PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica]	[more]
gi\|802754658\|ref\|XP_012088745.1\|	1.5e-31	49.25	PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]	[more]
gi\|224053539\|ref\|XP_002297863.1\|	2.5e-31	51.26	Humj1 family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G000190.1	CmoCh08G000190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 1..185 score: 2.5
None	No IPR available	PANTHER	PTHR14791:SF27	SUBFAMILY NOT NAMED	coord: 1..185 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G000190	Cucsa.349290	Cucumber (Gy14) v1	cgycmoB0955
CmoCh08G000190	CmaCh17G014110	Cucurbita maxima (Rimu)	cmacmoB376
CmoCh08G000190	Cla001488	Watermelon (97103) v1	cmowmB868
CmoCh08G000190	Csa6G091940	Cucumber (Chinese Long) v2	cmocuB889
CmoCh08G000190	MELO3C022347	Melon (DHL92) v3.5.1	cmomeB801
CmoCh08G000190	ClCG06G001810	Watermelon (Charleston Gray)	cmowcgB800
CmoCh08G000190	CSPI06G07450	Wild cucumber (PI 183967)	cmocpiB902
CmoCh08G000190	Lsi09G017610	Bottle gourd (USVL1VR-Ls)	cmolsiB798
CmoCh08G000190	Cp4.1LG12g09920	Cucurbita pepo (Zucchini)	cmocpeB841
CmoCh08G000190	Cp4.1LG17g09230	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G000190	MELO3C022347.2	Melon (DHL92) v3.6.1	cmomedB904
CmoCh08G000190	CsaV3_6G007850	Cucumber (Chinese Long) v3	cmocucB1054
CmoCh08G000190	Cla97C06G111110	Watermelon (97103) v2	cmowmbB897
CmoCh08G000190	Bhi12G002136	Wax gourd	cmowgoB1091
CmoCh08G000190	CsGy6G007470	Cucumber (Gy14) v2	cgybcmoB853
CmoCh08G000190	Carg03813	Silver-seed gourd	carcmoB1322
CmoCh08G000190	Carg11570	Silver-seed gourd	carcmoB0024

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G000190	CmoCh17G013580	Cucurbita moschata (Rifu)	cmocmoB322

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G000190	Cucurbita maxima (Rimu)	cmacmoB913