CmoCh08G000190.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh08G000190.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHumj1 family protein
LocationCmo_Chr08 : 98637 .. 100328 (+)
Sequence length1229
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGGTCAGTGTAACCATTCTCGCCTCGCTTTTCATTTTGTGTCTAATTTGCGTCTGCTTAGTTAATTCAACGCCAACTTCTCCTTTTTCCTTTTTCTTCTCCTCTTCTAACCTAGCTTCATTTAATGCCAAAGCCGCATATGGCAGATCTCTGGAAATTCTGTTGCCTTGTACTTTTCATTAATTTTATGATGATTGTCGGAGAGAAAGCTTTGGGTTTCATCTTTAATGACTTTCTCATCCCATTAATTTGCCTTTATCATTTGCTTTCTTTGTTTCTTTCCTTCCTCCCACCCGGAATCGAAACCCTAGAATTAATTAATTTCACACCTCCTTTATCGTCCGCCATTTTTCGCTTCTCTTTTCGTACGACAGATCAGAAACAGCTTTCTGGATTTTGGACCCCTGCCTCTTTCATTTTTTTTTATTTTTTTCTTTCCAATTTTCAATAAACTTTTGCGATTCAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

mRNA sequence

CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

Coding sequence (CDS)

ATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGA
BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.6e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: B9RFX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 98/208 (47.12%), Postives = 122/208 (58.65%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS---------SSSSSSSSFLDHEQRHHQLH--- 60
           M +P+ A  T SL+ S +  SLNH  +          SSSS  + F   +Q+  Q H   
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHHQSRGVLGGAGERSSSSDDADFGAAQQQEDQNHNNN 60

Query: 61  -----------TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRM 120
                      TTL+LNSH+SLP  WEQCL LK      TGE+YY N R GM+ KEDPR+
Sbjct: 61  LNLPTSNSSTDTTLELNSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRV 120

Query: 121 AKDLYSEDDDDDDESSSDEGSEESCSSSSYSGSRQQYP---RENEEEVLVVAGCKRCFMY 180
            ++ YS D   +DESS D  SEES S SS   SR+ Y     + E+ VLVVAGCK C MY
Sbjct: 121 TQE-YSGDYYSEDESSYD--SEESSSESSPPSSREHYTSRGEQKEDHVLVVAGCKSCLMY 180

Query: 181 FMVPKQVEGCPKCSSSRLVHFDRTHDNN 183
           FMVPKQVE CPKC + +L+HFDR+ D +
Sbjct: 181 FMVPKQVEDCPKC-NGQLLHFDRSEDGS 198

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSS----SSSFLDHEQRHHQLH---TTLDL 60
           M +P+ AA T SL+ S +  SLNH     SS      SSS  + + ++H L    T+L+L
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNSDTSLEL 60

Query: 61  NSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDDESS 120
            SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ +D Y+ D   +D+SS
Sbjct: 61  KSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQD-YNGDFYSEDDSS 120

Query: 121 SDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSR 180
            D  SEES S SS   SR+ +    E E+ VLVVAGCK CFMYFMVPKQVE CPKC   +
Sbjct: 121 YD--SEESSSESSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC-DGQ 180

Query: 181 LVHFDRTHDNNGFP 186
           L+HFDR+   NG P
Sbjct: 181 LLHFDRS--ENGSP 182

BLAST of CmoCh08G000190.1 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-31
Identity = 91/202 (45.05%), Postives = 111/202 (54.95%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLP 60
           MK+P+    T SL+ S    SLN R              +E        TL+LNSH+SLP
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDRTLELNSHLSLP 60

Query: 61  PFWEQCLHLKFRSV---------FQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD--- 120
             WEQCL LK + +         F+TGE+YY N + GMRVKEDPR   +   +  D    
Sbjct: 61  CHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGT 120

Query: 121 --DDESSSDEGSEESCSSSSYSGSRQQYPRENEEE---------VLVVAGCKRCFMYFMV 180
              +E SS   SEES S SS S SR+ +  E EEE         VLVVAGCK CFMYFMV
Sbjct: 121 VCSEEDSSYYDSEESSSESSPS-SRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMV 180

BLAST of CmoCh08G000190.1 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 78/186 (41.94%), Postives = 105/186 (56.45%), Query Frame = 1

Query: 7   AATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLPPFWEQC 66
           A  T  L+ S +  SL  R     SS    F   ++        L+L+SH S+P   EQC
Sbjct: 2   ADITEYLERSMQNCSLIDR----RSSMGDGFGMSDEHIPISDRFLELSSHFSVPSHLEQC 61

Query: 67  LHLKFRSVFQTGEVYYTNCRTGMRVKEDPR--MAKDLYSEDDDDD--------DESSSDE 126
           L LK      TGE+YY +  +GMRVKEDPR  M++  Y++    +        +E SS  
Sbjct: 62  LDLK------TGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSSYY 121

Query: 127 GSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVHFD 183
            SEES S SS S SR+ +  E +E+VLVVAGCK C MYFMVPK  + CPKC +++L+HFD
Sbjct: 122 ESEESSSESSPS-SRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC-ATQLLHFD 175

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 143/207 (69.08%), Postives = 156/207 (75.36%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDDDD-DESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVP 180
           DLYSEDD +D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMVP
Sbjct: 121 DLYSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVP 180

Query: 181 KQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           KQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 KQVEDCPKCSSSRLVHFDRSDESNGFP 201

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|743880238|ref|XP_011036150.1| (PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 101/203 (49.75%), Postives = 122/203 (60.10%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILGGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKD----LYSE 120
           T+L+L SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ ++     YSE
Sbjct: 61  TSLELKSHVSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQEYNGGFYSE 120

Query: 121 DDDDDDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVE 180
           DD   D       SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE
Sbjct: 121 DDSSYD-------SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVE 180

Query: 181 GCPKCSSSRLVHFDRTHDNNGFP 186
            CPKC + +L+HFDR+   NG P
Sbjct: 181 VCPKC-NGQLLHFDRS--ENGSP 186

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|224053539|ref|XP_002297863.1| (Humj1 family protein [Populus trichocarpa])

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1

Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KF89_CUCSA6.6e-6368.75Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1[more]
A0A067JTH2_JATCU1.0e-3149.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1[more]
A9PEE5_POPTR1.8e-3151.26Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1[more]
B9RFX1_RICCO3.0e-3147.12Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1[more]
B9GZB4_POPTR3.0e-3150.00Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G33510.24.6e-3145.05 unknown protein[more]
AT1G28070.13.0e-2241.94 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659119898|ref|XP_008459902.1|4.3e-6369.08PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo][more]
gi|449445588|ref|XP_004140554.1|9.5e-6368.75PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus][more]
gi|743880238|ref|XP_011036150.1|1.1e-3149.75PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica][more]
gi|802754658|ref|XP_012088745.1|1.5e-3149.25PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas][more]
gi|224053539|ref|XP_002297863.1|2.5e-3151.26Humj1 family protein [Populus trichocarpa][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh08G000190CmoCh08G000190gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh08G000190.1CmoCh08G000190.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G000190.1.exon.1CmoCh08G000190.1.exon.1exon
CmoCh08G000190.1.exon.2CmoCh08G000190.1.exon.2exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G000190.1.five_prime_UTR.1CmoCh08G000190.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G000190.1.CDS.1CmoCh08G000190.1.CDS.1CDS
CmoCh08G000190.1.CDS.2CmoCh08G000190.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G000190.1.three_prime_UTR.1CmoCh08G000190.1.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14791BOMB/KIRA PROTEINScoord: 1..185
score: 2.5
NoneNo IPR availablePANTHERPTHR14791:SF27SUBFAMILY NOT NAMEDcoord: 1..185
score: 2.5