CmoCh08G000190.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G000190.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Humj1 family protein
Location	Cmo_Chr08 : 98637 .. 100328 (+)
Sequence length	1229

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGGTCAGTGTAACCATTCTCGCCTCGCTTTTCATTTTGTGTCTAATTTGCGTCTGCTTAGTTAATTCAACGCCAACTTCTCCTTTTTCCTTTTTCTTCTCCTCTTCTAACCTAGCTTCATTTAATGCCAAAGCCGCATATGGCAGATCTCTGGAAATTCTGTTGCCTTGTACTTTTCATTAATTTTATGATGATTGTCGGAGAGAAAGCTTTGGGTTTCATCTTTAATGACTTTCTCATCCCATTAATTTGCCTTTATCATTTGCTTTCTTTGTTTCTTTCCTTCCTCCCACCCGGAATCGAAACCCTAGAATTAATTAATTTCACACCTCCTTTATCGTCCGCCATTTTTCGCTTCTCTTTTCGTACGACAGATCAGAAACAGCTTTCTGGATTTTGGACCCCTGCCTCTTTCATTTTTTTTTATTTTTTTCTTTCCAATTTTCAATAAACTTTTGCGATTCAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

mRNA sequence

CTCAACAACTCCCACGCGCACCTTCACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAAGAATTACGATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCTTCTTCTTCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTGTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATACTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTATGATGTCTCAGTGTGTGTTGATGCGTATGGATTGAAAAGTTGGATTAATTGAGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTCTTTTTTTAATTTTTTTTATGGGTAGACTGTGATTATATAATGGAAATGAATATGAAGTGGTTTAAAATACATACAGACATCAATAAAGCTCAACCCTTTTTGTTATGTGGGTAACTAATCAACATTTG

Coding sequence (CDS)

ATGAAATCTCCCGATACGGCGGCGACTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCCTCTTCTTCCTCTTCTTCTTTCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCCATTTGAAGTTCCGTTCGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGATGGCGAAAGATTTATACTCCGAAGACGACGACGATGATGACGAGAGCTCCTCGGACGAGGGCAGCGAGGAATCGTGTTCTTCGTCATCTTACAGCGGTAGTAGACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCGGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGA

Homology

[Close]

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.6e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: B9RFX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 98/208 (47.12%), Postives = 122/208 (58.65%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS---------SSSSSSSSFLDHEQRHHQLH--- 60
           M +P+ A  T SL+ S +  SLNH  +          SSSS  + F   +Q+  Q H   
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHHQSRGVLGGAGERSSSSDDADFGAAQQQEDQNHNNN 60

Query: 61  -----------TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRM 120
                      TTL+LNSH+SLP  WEQCL LK      TGE+YY N R GM+ KEDPR+
Sbjct: 61  LNLPTSNSSTDTTLELNSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRV 120

Query: 121 AKDLYSEDDDDDDESSSDEGSEESCSSSSYSGSRQQYP---RENEEEVLVVAGCKRCFMY 180
            ++ YS D   +DESS D  SEES S SS   SR+ Y     + E+ VLVVAGCK C MY
Sbjct: 121 TQE-YSGDYYSEDESSYD--SEESSSESSPPSSREHYTSRGEQKEDHVLVVAGCKSCLMY 180

Query: 181 FMVPKQVEGCPKCSSSRLVHFDRTHDNN 183
           FMVPKQVE CPKC + +L+HFDR+ D +
Sbjct: 181 FMVPKQVEDCPKC-NGQLLHFDRSEDGS 198

[Close]

BLAST of CmoCh08G000190.1 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSS----SSSFLDHEQRHHQLH---TTLDL 60
           M +P+ AA T SL+ S +  SLNH     SS      SSS  + + ++H L    T+L+L
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNSDTSLEL 60

Query: 61  NSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDDESS 120
            SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ +D Y+ D   +D+SS
Sbjct: 61  KSHLSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQD-YNGDFYSEDDSS 120

Query: 121 SDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSR 180
            D  SEES S SS   SR+ +    E E+ VLVVAGCK CFMYFMVPKQVE CPKC   +
Sbjct: 121 YD--SEESSSESSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKC-DGQ 180

Query: 181 LVHFDRTHDNNGFP 186
           L+HFDR+   NG P
Sbjct: 181 LLHFDRS--ENGSP 182

[Close]

BLAST of CmoCh08G000190.1 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-31
Identity = 91/202 (45.05%), Postives = 111/202 (54.95%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLP 60
           MK+P+    T SL+ S    SLN R              +E        TL+LNSH+SLP
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDRTLELNSHLSLP 60

Query: 61  PFWEQCLHLKFRSV---------FQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD--- 120
             WEQCL LK + +         F+TGE+YY N + GMRVKEDPR   +   +  D    
Sbjct: 61  CHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGT 120

Query: 121 --DDESSSDEGSEESCSSSSYSGSRQQYPRENEEE---------VLVVAGCKRCFMYFMV 180
              +E SS   SEES S SS S SR+ +  E EEE         VLVVAGCK CFMYFMV
Sbjct: 121 VCSEEDSSYYDSEESSSESSPS-SRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMV 180

[Close]

BLAST of CmoCh08G000190.1 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 78/186 (41.94%), Postives = 105/186 (56.45%), Query Frame = 1


Query: 7   AATTHSLQHSFRTFSLNHRLASSSSSSSSSFLDHEQRHHQLHTTLDLNSHISLPPFWEQC 66
           A  T  L+ S +  SL  R     SS    F   ++        L+L+SH S+P   EQC
Sbjct: 2   ADITEYLERSMQNCSLIDR----RSSMGDGFGMSDEHIPISDRFLELSSHFSVPSHLEQC 61

Query: 67  LHLKFRSVFQTGEVYYTNCRTGMRVKEDPR--MAKDLYSEDDDDD--------DESSSDE 126
           L LK      TGE+YY +  +GMRVKEDPR  M++  Y++    +        +E SS  
Sbjct: 62  LDLK------TGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSSYY 121

Query: 127 GSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVHFD 183
            SEES S SS S SR+ +  E +E+VLVVAGCK C MYFMVPK  + CPKC +++L+HFD
Sbjct: 122 ESEESSSESSPS-SRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC-ATQLLHFD 175

[Close]

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 143/207 (69.08%), Postives = 156/207 (75.36%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDDDD-DESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVP 180
           DLYSEDD +D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMVP
Sbjct: 121 DLYSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVP 180

Query: 181 KQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           KQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 KQVEDCPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-63
Identity = 143/208 (68.75%), Postives = 155/208 (74.52%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS------------SSSSSSSSFLDHE-----QR 60
           MKSPD AA T SL+ SFR FSLNHRL+S            SS SSSSS  D E      +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMA----K 120
           H++  T L+LNSHISLPPFWEQCL LK      TGEVYY NCRTGM+VKEDPR A    +
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLK------TGEVYYRNCRTGMKVKEDPRTAVAHSR 120

Query: 121 DLYSEDDD--DDDESSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMV 180
           DLY EDDD  D DESSSD GSEESCSSSSY GSRQQYP EN E+VLVVAGCKRCFMYFMV
Sbjct: 121 DLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMV 180

Query: 181 PKQVEGCPKCSSSRLVHFDRTHDNNGFP 186
           PKQVE CPKCSSSRLVHFDR+ ++NGFP
Sbjct: 181 PKQVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|743880238|ref|XP_011036150.1| (PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 101/203 (49.75%), Postives = 122/203 (60.10%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILGGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKD----LYSE 120
           T+L+L SH+SLP  WEQCL LK      TGE+YY N R GM+ +EDPR+ ++     YSE
Sbjct: 61  TSLELKSHVSLPYHWEQCLDLK------TGEIYYINWRNGMKAREDPRITQEYNGGFYSE 120

Query: 121 DDDDDDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVE 180
           DD   D       SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE
Sbjct: 121 DDSSYD-------SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVE 180

Query: 181 GCPKCSSSRLVHFDRTHDNNGFP 186
            CPKC + +L+HFDR+   NG P
Sbjct: 181 VCPKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHR-----LASSSSSSSSSFLDHE----QRHHQLH--T 60
           M +P+ AA T SL+ S +  SLNH      L +   SSSS   + E    +++H  +  T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAK----DLYSED 120
           TL+LNSHISLP  WEQCL LK      TGE+YY N R GM+ KEDPR+ +    D YSED
Sbjct: 61  TLELNSHISLPYHWEQCLDLK------TGEIYYINWRNGMKAKEDPRVKQEYNGDFYSED 120

Query: 121 DDDDDESSSDEGSEESCSSSSYSGSRQQYP-RENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D      SS +  E S  SS  S SR+ Y  ++ E+ VLVVAGCK C MYFMVPKQVE C
Sbjct: 121 D------SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDC 180

Query: 181 PKCSSSRLVHFDRTHDNNGFP 186
           PKC + +L+HFDR+   NG P
Sbjct: 181 PKC-NGQLLHFDRS--ENGSP 186

[Close]

BLAST of CmoCh08G000190.1 vs. NCBI nr
Match: gi|224053539|ref|XP_002297863.1| (Humj1 family protein [Populus trichocarpa])

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1


Query: 1   MKSPDTAATTHSLQHSFRTFSLNHRLASSSS----------SSSSSFLDHEQRHHQLH-- 60
           M +P+ AA T SL+ S +  SLNH     SS          SSSS  LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDD 120
           T+L+L SH+SLP  WEQCL LK      TGEVYY N R GM+ +EDPR+ ++ Y+ D   
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLK------TGEVYYINWRNGMKAREDPRITQE-YNGDFYS 120

Query: 121 DDESSSDEGSEESCSSSSYSGSRQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           +D+SS D  SEES S SS S SR+ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPK
Sbjct: 121 EDDSSYD--SEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPK 180

Query: 181 CSSSRLVHFDRTHDNNGFP 186
           C + +L+HFDR+   NG P
Sbjct: 181 C-NGQLLHFDRS--ENGSP 186

The following BLAST results are available for this feature:

BLAST of CmoCh08G000190.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000190.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF89_CUCSA	6.6e-63	68.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1	[more]
A0A067JTH2_JATCU	1.0e-31	49.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1	[more]
A9PEE5_POPTR	1.8e-31	51.26	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1	[more]
B9RFX1_RICCO	3.0e-31	47.12	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1	[more]
B9GZB4_POPTR	3.0e-31	50.00	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2	[more]

BLAST of CmoCh08G000190.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	4.6e-31	45.05	unknown protein	[more]
AT1G28070.1	3.0e-22	41.94	unknown protein	[more]

BLAST of CmoCh08G000190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119898\|ref\|XP_008459902.1\|	4.3e-63	69.08	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
gi\|449445588\|ref\|XP_004140554.1\|	9.5e-63	68.75	PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus]	[more]
gi\|743880238\|ref\|XP_011036150.1\|	1.1e-31	49.75	PREDICTED: uncharacterized protein LOC105133747 [Populus euphratica]	[more]
gi\|802754658\|ref\|XP_012088745.1\|	1.5e-31	49.25	PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]	[more]
gi\|224053539\|ref\|XP_002297863.1\|	2.5e-31	51.26	Humj1 family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G000190	CmoCh08G000190	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G000190.1	CmoCh08G000190.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G000190.1.exon.1	CmoCh08G000190.1.exon.1	exon
CmoCh08G000190.1.exon.2	CmoCh08G000190.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G000190.1.five_prime_UTR.1	CmoCh08G000190.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G000190.1.CDS.1	CmoCh08G000190.1.CDS.1	CDS
CmoCh08G000190.1.CDS.2	CmoCh08G000190.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G000190.1.three_prime_UTR.1	CmoCh08G000190.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 1..185 score: 2.5
None	No IPR available	PANTHER	PTHR14791:SF27	SUBFAMILY NOT NAMED	coord: 1..185 score: 2.5