CsaV3_6G007850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G007850
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionATP-dependent RNA helicase
Locationchr6 : 6297952 .. 6300116 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTCCCTCCTTTTCTCTTTTCTTTGCTAAAATAATTTATTTGTTTATTTTAATCATCCGACGACGATAACACACATTCTTTCCCTTCTTCTTATTCTCATTCTTTCTTCCATTTAATCTCTTTTCTTATTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCATCGAGATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAATCTTTCCGTAACTTCTCCCTCAACCACCGTCTATCCTCCGCCGCCCCCTCCTCCGCCGGAGTGCGGAGATCACCGTCTTCATTTTCTTCCTCTTCCTCCTCTTCCGATGACGAACCTCATCTTCCTCTTCATCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCCTTCTGGGAGCAATGTCTCGATTTGAAGGTCAGTATCCAGTATATCCACCATTACCCCCTACCTATCTCCTTTTTCTTTTTCTTTTTCTTTTTCTTCCTTCTGCTTCTACTTCTCTTCTTCTCTCGTTTTGATGTTTTTTGTCTTTTTCTCTCCTGATTCATCTTCCGATTCCTTCGTGTTTTTTTTTTTTCTTTTTTTTTTTTTTGTTTTCTTTTTCCTCTTCTTAACCTAACTTCATTTATTGCCAAAGGTCACATATGGCAGATCTTTGCAAATTCTGTTGTCTTGTACTTTTGATTATTAATTTCTTTTTTATGATTGTTTCAGATGGAGCTTTCGTTTCCTTCTTTAATTAATGCGTTTCTGTATTCATAAATTTGTCTTGATGATTAATGTTTTCCTTTTTCCATACATACTTCGTCCATAGGATTCGGATTCGGATTCCAAACCCTAGAATTAATTTATTTTATATTTCCTTTTATCGTCCGCCATTTTTTTCGCTTCTCTTTTCCTACAAAGCAACTTTTCTGGATTTTTGATTCCGCTTTCTTTGTTCTTTTGCTTTGATTTTGATTTCCCCTCGGGAACATTAAAATTAACTTTTCGATTCATTTTCTTTTGGATTTCTAGACAGGGGAAGTTTACTATAGAAACTGCCGAACCGGAATGAAGGTAAAAGAAGATCCGAGGACAGCGGTAGCACACAGCCGAGATTTATATTTGGAAGACGACGACGGAGAGGACGGTGATGAAAGTTCTTCAGACGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATATCCAGCGGAAAACGTGGAGGACGTACTGGTGGTGGCTGGATGCAAGAGATGCTTCATGTATTTCATGGTACCGAAACAGGTTGAAGATTGTCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGAGAGTAATGGGTTCCCATGAACCACTTTATTTATTATTTTTGAGAAAACAAGAAATCAAAATCAAACTGTATTTGGGTTAAATTGATCTGACAAAATCATTGATTCTTTTTCTTTGGATTAATTTGGTGATTAGCAAAAGGCTAAATGGGGATTTAAATTTCTTTAATTAGCTCTATTTCTCTCTTTGTGAATGATCTGTTGTTCGTGTGTTCGTTGTTATTGATATGTAGACAAAAATTATAGAAAAACAAAAAGAAGAATTGAAATGAAAAGAATGTGAGAAAGAGTGCGGCCATGGATGATGGTATAAGGAGGAAGCTGATAGAGAGGGTATATGAATGGGATGGTCAACGACTCAAAGGAAGAAGAAGAAGAAGAAGAAGAAGGGAATAATATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATGATTCCTCAACCCACACTGATTGAATCGTACGCAATTATTATTATTATTATTTTAACAACCCAAAAATTCAATCAATTTACTAATTCTTCTTTATATGATGATTAATTATGGGATTATCTAATTGAAACGGGTTAACCTTAGCCTTAATAAATGTCTAAATTAAAATGCACTATTAGAATTTCAATATAATATATAGTCTTCTTAACCCCTCTCATCTAACCTTCTATTTTTTGGTTTGCAACATTTGAGGTAAAAACAACCAACAATATGTAAAATCTTTAACTCTAAGAAACACAATAAAATATGAATTGATGAACCCTAACATCCAAACTATTTACACAAAATACAAAAATCTTTCAATTC

mRNA sequence

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAATCTTTCCGTAACTTCTCCCTCAACCACCGTCTATCCTCCGCCGCCCCCTCCTCCGCCGGAGTGCGGAGATCACCGTCTTCATTTTCTTCCTCTTCCTCCTCTTCCGATGACGAACCTCATCTTCCTCTTCATCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCCTTCTGGGAGCAATGTCTCGATTTGAAGACAGGGGAAGTTTACTATAGAAACTGCCGAACCGGAATGAAGGTAAAAGAAGATCCGAGGACAGCGGTAGCACACAGCCGAGATTTATATTTGGAAGACGACGACGGAGAGGACGGTGATGAAAGTTCTTCAGACGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATATCCAGCGGAAAACGTGGAGGACGTACTGGTGGTGGCTGGATGCAAGAGATGCTTCATGTATTTCATGGTACCGAAACAGGTTGAAGATTGTCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGAGAGTAATGGGTTCCCATGA

Coding sequence (CDS)

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAATCTTTCCGTAACTTCTCCCTCAACCACCGTCTATCCTCCGCCGCCCCCTCCTCCGCCGGAGTGCGGAGATCACCGTCTTCATTTTCTTCCTCTTCCTCCTCTTCCGATGACGAACCTCATCTTCCTCTTCATCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCCTTCTGGGAGCAATGTCTCGATTTGAAGACAGGGGAAGTTTACTATAGAAACTGCCGAACCGGAATGAAGGTAAAAGAAGATCCGAGGACAGCGGTAGCACACAGCCGAGATTTATATTTGGAAGACGACGACGGAGAGGACGGTGATGAAAGTTCTTCAGACGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATATCCAGCGGAAAACGTGGAGGACGTACTGGTGGTGGCTGGATGCAAGAGATGCTTCATGTATTTCATGGTACCGAAACAGGTTGAAGATTGTCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGAGAGTAATGGGTTCCCATGA

Protein sequence

MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSDESNGFP
Homology
[Close]
BLAST of CsaV3_6G007850 vs. NCBI nr
Match: XP_004140554.1 (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical protein Csa_6G091940 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
           HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKCSSSRLVHFDRSDESNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]
BLAST of CsaV3_6G007850 vs. NCBI nr
Match: XP_016902460.1 (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 281.6 bits (719), Expect = 2.2e-72
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
           HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLY E 
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSE- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDES 199
           CPKCSSSRLVHFDRSDE+
Sbjct: 181 CPKCSSSRLVHFDRSDET 197

[Close]
BLAST of CsaV3_6G007850 vs. NCBI nr
Match: XP_022953156.1 (uncharacterized protein LOC111455780 [Cucurbita moschata])

HSP 1 Score: 241.9 bits (616), Expect = 1.9e-60
Identity = 165/202 (81.68%), Postives = 170/202 (84.16%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAP     XXXXXXXXX         HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRXXXXXXXXXDER------HLPLNQ 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY  X
Sbjct: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           VAGCKRCFMYFMVPKQVED
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSEDSNGFP 196

[Close]
BLAST of CsaV3_6G007850 vs. NCBI nr
Match: XP_023547639.1 (uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 157/197 (79.70%), Postives = 162/197 (82.23%), Query Frame = 0 

Query: 6   MAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQHNRFD 65
           MAAVTDSLEQSFR FSLNHRL SA P     XXXXXXXXX         HL L+QH+RFD
Sbjct: 1   MAAVTDSLEQSFRTFSLNHRLVSAPPSAGVRXXXXXXXXXDQR------HLSLNQHHRFD 60

Query: 66  TILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEXXXXXX 125
           T LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY  XXXXXX
Sbjct: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSXXXXXXX 120

Query: 126 XXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 185
           XXXXXXXXXXXXXXXXXXXXXXXXX            AGCKRCFMYFMVPKQVEDCPKCS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCKRCFMYFMVPKQVEDCPKCS 180

Query: 186 SSRLVHFDRSDESNGFP 203
           SSRLVHFDRS++SNGFP
Sbjct: 181 SSRLVHFDRSEDSNGFP 191

[Close]
BLAST of CsaV3_6G007850 vs. NCBI nr
Match: XP_022991817.1 (uncharacterized protein LOC111488350 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 8.5e-53
Identity = 158/202 (78.22%), Postives = 161/202 (79.70%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL S AP          XXXXXXXXXXXX       
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAP-----SAGVRXXXXXXXXXXXXXXXXXXX 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
              FDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AH RDLY  X
Sbjct: 61  XXXFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRDLYSXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            AGCKRCFMYFMVPKQVED
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSEDSNGFP 197

[Close]
BLAST of CsaV3_6G007850 vs. TAIR10
Match: AT2G33510.2 (unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 106/216 (49.07%), Postives = 119/216 (55.09%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MK+P+M  +T+SLE+S  N SLN R                                 H 
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNE-----------------HM 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLK---------------TGEVYYRNCRTGMKVKED 120
               D  LELNSH+SLP  WEQCLDLK               TGE+YY N + GM+VKED
Sbjct: 61  TPISDRTLELNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKED 120

Query: 121 PR---TAVAHSRDLY----LEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVED 180
           PR    A   S D Y      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 121 PRKVMNADPDSGDSYGTVCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 VLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDR 195
                GCK CFMYFMVPK VEDCPKC +++L+HFDR
Sbjct: 181 XXXXXGCKACFMYFMVPKLVEDCPKC-AAQLLHFDR 198

[Close]
BLAST of CsaV3_6G007850 vs. TAIR10
Match: AT1G28070.1 (unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 97/194 (50.00%), Postives = 117/194 (60.31%), Query Frame = 0 

Query: 6   MAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQHNRFD 65
           MA +T+ LE+S +N SL  R SS                          H+P+      D
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMG----------------DGFGMSDEHIPIS-----D 60

Query: 66  TILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYL-----EX 125
             LEL+SH S+P   EQCLDLKTGE+YYR+  +GM+VKEDPR ++  SR  Y      E 
Sbjct: 61  RFLELSSHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPRKSM--SRGNYADQSSGES 120

Query: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 185
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             GCK C MYFMVPK  +D
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCKACLMYFMVPKLFKD 170

Query: 186 CPKCSSSRLVHFDR 195
           CPKC +++L+HFD+
Sbjct: 181 CPKC-ATQLLHFDQ 170

[Close]
BLAST of CsaV3_6G007850 vs. TrEMBL
Match: tr|A0A0A0KF89|A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-78
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
           HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKCSSSRLVHFDRSDESNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]
BLAST of CsaV3_6G007850 vs. TrEMBL
Match: tr|A0A1S4E3A8|A0A1S4E3A8_CUCME (uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-72
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
           HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLY E 
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSE- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDES 199
           CPKCSSSRLVHFDRSDE+
Sbjct: 181 CPKCSSSRLVHFDRSDET 197

[Close]
BLAST of CsaV3_6G007850 vs. TrEMBL
Match: tr|A0A2N9I3E3|A0A2N9I3E3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47084 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 113/202 (55.94%), Postives = 130/202 (64.36%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           M  P+MA +T SLE+SF+N SLN +  S +     XXXXXXXXXXXXXXXX   HLP   
Sbjct: 1   MSGPNMATITASLERSFQNCSLNQQTRSGS--GSRXXXXXXXXXXXXXXXXPDNHLP--- 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
               +T LELNS+ISLP  WEQCLDLKTGE+YY N R GMK K+DPRT   +S D Y E 
Sbjct: 61  --SSETTLELNSNISLPYHWEQCLDLKTGEIYYINWRNGMKAKDDPRTTAEYSGDFYSED 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
               XXXXXXXXX                    ++ + VLVVAGCK C MYFMVPKQVED
Sbjct: 121 DSSCXXXXXXXXXSPAPISSREQHYRVD---QKDHKDHVLVVAGCKSCLMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKC   +L+HFDRS+  NG P
Sbjct: 181 CPKC-CGQLLHFDRSE--NGSP 189

[Close]
BLAST of CsaV3_6G007850 vs. TrEMBL
Match: tr|A0A2I4GJ59|A0A2I4GJ59_9ROSI (uncharacterized protein LOC109008332 OS=Juglans regia OX=51240 GN=LOC109008339 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 119/202 (58.91%), Postives = 135/202 (66.83%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           M +P+MAA+T SLE+S +N SLNH+      XXXXXXXXXXXXXX         HLP   
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHQTXXXXXXXXXXXXXXXXXXXTPDN-----HLP--- 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
               DT LELNSH+SLP  WEQCLDLKTGE+YY N RTGMK KEDPR    +S D Y E 
Sbjct: 61  --NSDTTLELNSHMSLPYHWEQCLDLKTGEIYYINWRTGMKAKEDPRITAEYSGDFYSED 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
              XXXXXXXXXXXXXXXXXX            ++ + VLVVAGCK C MY MVPKQ ED
Sbjct: 121 ESSXXXXXXXXXXXXXXXXXXRVD-------QKDHKDHVLVVAGCKSCLMYVMVPKQAED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKC S +L+HFD+ +  NG P
Sbjct: 181 CPKC-SGQLLHFDKCE--NGSP 182

[Close]
BLAST of CsaV3_6G007850 vs. TrEMBL
Match: tr|A0A2C9VF41|A0A2C9VF41_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G103100 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 127/202 (62.87%), Postives = 140/202 (69.31%), Query Frame = 0 

Query: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPXXXXXXXXXXXXXXXXXXXXXXPHLPLHQ 60
           M  P+MA +T SLE+S +N SLNH  S          XXXXXXXXXXXXXXX P    H 
Sbjct: 1   MTPPNMATITASLERSLQNCSLNHHRSRGVLGVGERTXXXXXXXXXXXXXXXVPQ-QNHL 60

Query: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLEX 120
               DT LELNSH+SLP  WEQCLDLKTGE+YY N R GMK KEDPR    ++ D Y   
Sbjct: 61  LPTSDTTLELNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-VTQYNGDFY--- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180
                 XXXXXXXXXXXXXXXXXXXXXXXXY  +    VLVVAGCK CFMYFMVPKQVED
Sbjct: 121 -----SXXXXXXXXXXXXXXXXXXXXXXXXYRVQRENHVLVVAGCKSCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSDESNGFP 203
           CPKC + +L+HFDRS+  NG P
Sbjct: 181 CPKC-NGQLLHFDRSE--NGSP 189

The following BLAST results are available for this feature:
BLAST of CsaV3_6G007850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140554.11.0e-77100.00PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hy... [more]
XP_016902460.12.2e-7297.98PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo][more]
XP_022953156.11.9e-6081.68uncharacterized protein LOC111455780 [Cucurbita moschata][more]
XP_023547639.13.1e-5579.70uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo][more]
XP_022991817.18.5e-5378.22uncharacterized protein LOC111488350 [Cucurbita maxima][more]
BLAST of CsaV3_6G007850 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33510.22.9e-2349.07unknown protein[more]
AT1G28070.12.1e-2150.00unknown protein[more]
BLAST of CsaV3_6G007850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G007850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KF89|A0A0A0KF89_CUCSA6.6e-78100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1[more]
tr|A0A1S4E3A8|A0A1S4E3A8_CUCME1.4e-7297.98uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=... [more]
tr|A0A2N9I3E3|A0A2N9I3E3_FAGSY4.2e-3255.94Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47084 PE=4 SV=1[more]
tr|A0A2I4GJ59|A0A2I4GJ59_9ROSI1.2e-3158.91uncharacterized protein LOC109008332 OS=Juglans regia OX=51240 GN=LOC109008339 P... [more]
tr|A0A2C9VF41|A0A2C9VF41_MANES1.2e-3162.87Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G103100 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G007850.1CsaV3_6G007850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.20.70.10coord: 74..112
e-value: 8.4E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..150
NoneNo IPR availablePANTHERPTHR14791BOMB/KIRA PROTEINScoord: 118..194
coord: 72..113
NoneNo IPR availablePANTHERPTHR14791:SF29PROTEIN KIBRAcoord: 118..194
NoneNo IPR availablePANTHERPTHR14791:SF29PROTEIN KIBRAcoord: 72..113
IPR036020WW domain superfamilySUPERFAMILYSSF51045WW domaincoord: 72..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G007850CSPI06G07450Wild cucumber (PI 183967)cpicucB364
CsaV3_6G007850Cucsa.349290Cucumber (Gy14) v1cgycucB532
CsaV3_6G007850CmaCh17G014110Cucurbita maxima (Rimu)cmacucB0439
CsaV3_6G007850CmoCh17G013580Cucurbita moschata (Rifu)cmocucB0433
CsaV3_6G007850CmoCh08G000190Cucurbita moschata (Rifu)cmocucB1054
CsaV3_6G007850Cp4.1LG17g09230Cucurbita pepo (Zucchini)cpecucB0403
CsaV3_6G007850Cp4.1LG08g06480Cucurbita pepo (Zucchini)cpecucB1075
CsaV3_6G007850Cp4.1LG03g13210Cucurbita pepo (Zucchini)cpecucB0784
CsaV3_6G007850Cp4.1LG12g09920Cucurbita pepo (Zucchini)cpecucB0166
CsaV3_6G007850CsGy6G007470Cucumber (Gy14) v2cgybcucB298
CsaV3_6G007850Carg11570Silver-seed gourdcarcucB0012
CsaV3_6G007850Carg15429Silver-seed gourdcarcucB0734
CsaV3_6G007850Carg03813Silver-seed gourdcarcucB1024
CsaV3_6G007850Cla001488Watermelon (97103) v1cucwmB562
CsaV3_6G007850MELO3C022347Melon (DHL92) v3.5.1cucmeB444
CsaV3_6G007850ClCG06G001810Watermelon (Charleston Gray)cucwcgB497
CsaV3_6G007850Lsi09G017610Bottle gourd (USVL1VR-Ls)cuclsiB424
CsaV3_6G007850MELO3C022347.2Melon (DHL92) v3.6.1cucmedB435
CsaV3_6G007850Cla97C06G111110Watermelon (97103) v2cucwmbB487
CsaV3_6G007850Bhi12G002136Wax gourdcucwgoB549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G007850Cucumber (Gy14) v1cgycucB239
CsaV3_6G007850Cucurbita maxima (Rimu)cmacucB0267
CsaV3_6G007850Cucurbita maxima (Rimu)cmacucB1072
CsaV3_6G007850Cucurbita moschata (Rifu)cmocucB0148
CsaV3_6G007850Cucurbita moschata (Rifu)cmocucB0256
CsaV3_6G007850Cucurbita pepo (Zucchini)cpecucB0652
CsaV3_6G007850Wild cucumber (PI 183967)cpicucB053
CsaV3_6G007850Melon (DHL92) v3.6.1cucmedB451