Cp4.1LG17g09230 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Humj1 family protein
Location	Cp4.1LG17 : 7210496 .. 7212339 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCCACGTCGGTGTTATATTCTCAACAACTCCCACGCGCACCTTGACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAATAATTACAATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCGTCTTCTTCTGCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGTGTAACCATTCTCGCCTCGCTTTTCATTTTGTGTCTAATTTGCGTCTGCTTAATTAATTCAACGCCTACTTCTCTTCTAACCTAGCTTCATTTAATGCCAAACGCGCATACGGCAGATCTCTGGAAATTCTGTTGTCTTCTACTTTTCATTAATTTTATGATGATTGTCGGAGAGGAAGCTTTGGGTTTCATCTTTAATGACTTTCTCATCCCATTAATTTGCCTTTATCATTTGCTTTCTTTGTTTCTTTCCTTCCTGCCACTCGGAATCGAAACCCTAGAATTAATTAATTTCACACTTCCTTTATCGTCCGCCATTTTTCGCTTCTCTTTTCGTACGATACATCAGAAACAGCTTTCTGGATTTTGGATTCCCTGCCTCTTTTATTTTATTTTTTTTTTTCTTTCCAAATTTTCAATAAACTTTTGCGATTCAGTTCCGTTTGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTCTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATATTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTGTGTTGATGCGTATGGATTAAAAAAGTTTGATTAATTGGGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTTTTTTTTAATTGTTTTTTTATGGGTAAACTGTGATTATATAATGGCAATGAATATGAAATGATTTAAAATACATACGTACATACATTAATAAAGCTCAACCCTGTGGGTAACTAACTAATCAACATTTGCTTGCTTCTTAGTGAATGGTGTATTACTCTTAGTCTATGTTCAAAACTTGATTTACACTTTGGTCAACTCCTTATCCTAAACTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

mRNA sequence

TACCCCACGTCGGTGTTATATTCTCAACAACTCCCACGCGCACCTTGACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAATAATTACAATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCGTCTTCTTCTGCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTCTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATATTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTGTGTTGATGCGTATGGATTAAAAAAGTTTGATTAATTGGGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTTTTTTTTAATTGTTTTTTTATGGGTAAACTGTGATTATATAATGGCAATGAATATGAAATGATTTAAAATACATACGTACATACATTAATAAAGCTCAACCCTGTGGGTAACTAACTAATCAACATTTGCTTGCTTCTTAGTGAATGGTGTATTACTCTTAGTCTATGTTCAAAACTTGATTTACACTTTGGTCAACTCCTTATCCTAAACTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coding sequence (CDS)

ATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGA

Protein sequence

MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDRTHDNNGFP

Homology

[Close]

BLAST of Cp4.1LG17g09230 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67
Identity = 145/202 (71.78%), Postives = 163/202 (80.69%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPS-------PSSSSSSSSSPSSLDHE--QR 60
           MKSPD A +T SL+ SFR FSLNHRL+S++PS       PSS SSSSSS     H    +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRA----KDLYSED 120
           H++  T L+LNSHISLPPFWEQCLDLKTGEVYY NCRTGM+VKEDPR A    +DLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDDDD-DESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEG 180
           DD +D DESSSDG SEESCSSSSYGGS+QQYP EN E+VLVVAGCKRCFMYFMVPKQVE 
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSTRLVHFDRTHDNNGFP 189
           CPKCSS+RLVHFDR+ ++NGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Cp4.1LG17g09230 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-34
Identity = 101/197 (51.27%), Postives = 120/197 (60.91%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASS--SPSPSSSSSSSSSPSSLDHEQRHH-QLHT 60
           M +P+ A IT SL+ S +  SLNH  +         SSSS  +       EQ H     T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAK----DLYSEDDDDDDD 120
           TL+LNSHISLP  WEQCLDLKTGE+YY N R GM+ KEDPR  +    D YSEDD     
Sbjct: 61  TLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVKQEYNGDFYSEDD----- 120

Query: 121 ESSSDGDSEESCSSSSYGGSKQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS 180
              S  DSEES S SS   S +++ R  + E+ VLVVAGCK C MYFMVPKQVE CPKC+
Sbjct: 121 ---SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDCPKCN 180

Query: 181 STRLVHFDRTHDNNGFP 189
             +L+HFDR+   NG P
Sbjct: 181 G-QLLHFDRS--ENGSP 186

[Close]

BLAST of Cp4.1LG17g09230 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 102/198 (51.52%), Postives = 121/198 (61.11%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRL--ASSSPSPSSSSSSSSSPSSLDHEQRHHQLH-- 60
           M +P+ A IT SL+ S +  SLNH     SS          SSS   LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAK----DLYSEDDDDDD 120
           T+L+L SH+SLP  WEQCLDLKTGEVYY N R GM+ +EDPR  +    D YSEDD    
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLKTGEVYYINWRNGMKAREDPRITQEYNGDFYSEDD---- 120

Query: 121 DESSSDGDSEESCSSSSYGGSKQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKC 180
               S  DSEES S SS   S++ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPKC
Sbjct: 121 ----SSYDSEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPKC 180

Query: 181 SSTRLVHFDRTHDNNGFP 189
           +  +L+HFDR+   NG P
Sbjct: 181 NG-QLLHFDRS--ENGSP 186

[Close]

BLAST of Cp4.1LG17g09230 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-32
Identity = 99/191 (51.83%), Postives = 122/191 (63.87%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNH-RLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTL 60
           M +P+ A IT SL+ S +  SLNH R   SS      SSSS    S +H  ++    T+L
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNSD--TSL 60

Query: 61  DLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDG 120
           +L SH+SLP  WEQCLDLKTGE+YY N R GM+ +EDPR  +D Y+ D   +DD S    
Sbjct: 61  ELKSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAREDPRITQD-YNGDFYSEDDSSY--- 120

Query: 121 DSEESCSSSSYGGSKQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVH 180
           DSEES S SS   S++ +    E E+ VLVVAGCK CFMYFMVPKQVE CPKC   +L+H
Sbjct: 121 DSEESSSESSPPSSREHFNNRLEKEDHVLVVAGCKSCFMYFMVPKQVEDCPKCDG-QLLH 180

Query: 181 FDRTHDNNGFP 189
           FDR+   NG P
Sbjct: 181 FDRS--ENGSP 182

[Close]

BLAST of Cp4.1LG17g09230 vs. TrEMBL
Match: V4TQC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032280mg PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-32
Identity = 96/196 (48.98%), Postives = 120/196 (61.22%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLN-HRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTL 60
           M +P+ + IT SL+ S R  SLN H+  S          SSSS   +++         TL
Sbjct: 100 MTAPNMSTITESLERSLRNCSLNNHQRRSGVNGGRGIGRSSSSDDHINNNDDLQNGDATL 159

Query: 61  DLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKD-----LYSEDDDDDDDE 120
           +LNSH+SLP  WEQCLDLKTGE+YY N R GM+ KEDPR   +      YSE++D+D+D 
Sbjct: 160 ELNSHMSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRTTAESSGDFYYSEEEDEDEDS 219

Query: 121 SSSDGDSEESCSSSSYG-GSKQQYPR----ENEEEVLVVAGCKRCFMYFMVPKQVEGCPK 180
           S    DSEES S SS    SK+ Y R     N   VLVVAGCK C MYFMVPKQVE CPK
Sbjct: 220 SY---DSEESTSESSPAPSSKEHYHRSVKDNNNNNVLVVAGCKSCLMYFMVPKQVEDCPK 279

Query: 181 CSSTRLVHFDRTHDNN 186
           C+  +L+HFDR+ + +
Sbjct: 280 CNG-QLLHFDRSENES 291

[Close]

BLAST of Cp4.1LG17g09230 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29
Identity = 91/209 (43.54%), Postives = 113/209 (54.07%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MK+P+   IT SL+ S    SLN R           SSS+   + +           TL+
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDR--------TLE 60

Query: 61  LNSHISLPPFWEQCLDLK---------------TGEVYYTNCRTGMRVKEDPRRAKDLYS 120
           LNSH+SLP  WEQCLDLK               TGE+YY N + GMRVKEDPR+  +   
Sbjct: 61  LNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADP 120

Query: 121 EDDDDD----DDESSSDGDSEESCSSSSYGG--------SKQQYPRENEEEVLVVAGCKR 180
           +  D       +E SS  DSEES S SS            +++   E EE+VLVVAGCK 
Sbjct: 121 DSGDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKA 180

Query: 181 CFMYFMVPKQVEGCPKCSSTRLVHFDRTH 183
           CFMYFMVPK VE CPKC++ +L+HFDR H
Sbjct: 181 CFMYFMVPKLVEDCPKCAA-QLLHFDRPH 200

[Close]

BLAST of Cp4.1LG17g09230 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 1


Query: 7   APITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLDLNSHIS 66
           A IT  L+ S +  SL  R   SS       S    P S             L+L+SH S
Sbjct: 2   ADITEYLERSMQNCSLIDR--RSSMGDGFGMSDEHIPIS----------DRFLELSSHFS 61

Query: 67  LPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRR--AKDLYSEDDDDD-------DDESSS 126
           +P   EQCLDLKTGE+YY +  +GMRVKEDPR+  ++  Y++    +        +E SS
Sbjct: 62  VPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSS 121

Query: 127 DGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVH 186
             +SEES S SS   S++ +  E +E+VLVVAGCK C MYFMVPK  + CPKC +T+L+H
Sbjct: 122 YYESEESSSESS-PSSRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC-ATQLLH 175

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 9.0e-69
Identity = 145/201 (72.14%), Postives = 163/201 (81.09%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPS-------PSSSSSSSSSPSSLDHE--QR 60
           MKSPD A +T SL+ SFR FSLNHRL+S++PS       PSS SSSSSS     H    +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRA----KDLYSED 120
           H++  T L+LNSHISLPPFWEQCLDLKTGEVYY NCRTGM+VKEDPR A    +DLYSED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSED 120

Query: 121 DDDDDDESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGC 180
           D +D DESSSDG SEESCSSSSYGGS+QQYP EN E+VLVVAGCKRCFMYFMVPKQVE C
Sbjct: 121 DGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVEDC 180

Query: 181 PKCSSTRLVHFDRTHDNNGFP 189
           PKCSS+RLVHFDR+ ++NGFP
Sbjct: 181 PKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.7e-67
Identity = 145/202 (71.78%), Postives = 163/202 (80.69%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPS-------PSSSSSSSSSPSSLDHE--QR 60
           MKSPD A +T SL+ SFR FSLNHRL+S++PS       PSS SSSSSS     H    +
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHQLHTTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRA----KDLYSED 120
           H++  T L+LNSHISLPPFWEQCLDLKTGEVYY NCRTGM+VKEDPR A    +DLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDDDD-DESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEG 180
           DD +D DESSSDG SEESCSSSSYGGS+QQYP EN E+VLVVAGCKRCFMYFMVPKQVE 
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSTRLVHFDRTHDNNGFP 189
           CPKCSS+RLVHFDR+ ++NGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas])

HSP 1 Score: 152.5 bits (384), Expect = 7.2e-34
Identity = 101/197 (51.27%), Postives = 120/197 (60.91%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASS--SPSPSSSSSSSSSPSSLDHEQRHH-QLHT 60
           M +P+ A IT SL+ S +  SLNH  +         SSSS  +       EQ H     T
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHQSRGVLGAGERSSSSDDAEVEGAPTEQNHMPNSDT 60

Query: 61  TLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAK----DLYSEDDDDDDD 120
           TL+LNSHISLP  WEQCLDLKTGE+YY N R GM+ KEDPR  +    D YSEDD     
Sbjct: 61  TLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVKQEYNGDFYSEDD----- 120

Query: 121 ESSSDGDSEESCSSSSYGGSKQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS 180
              S  DSEES S SS   S +++ R  + E+ VLVVAGCK C MYFMVPKQVE CPKC+
Sbjct: 121 ---SSYDSEESSSESSPPSSSREHYRVQQKEDHVLVVAGCKSCLMYFMVPKQVEDCPKCN 180

Query: 181 STRLVHFDRTHDNNGFP 189
             +L+HFDR+   NG P
Sbjct: 181 G-QLLHFDRS--ENGSP 186

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: gi|224053539|ref|XP_002297863.1| (Humj1 family protein [Populus trichocarpa])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 102/198 (51.52%), Postives = 121/198 (61.11%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRL--ASSSPSPSSSSSSSSSPSSLDHEQRHHQLH-- 60
           M +P+ A IT SL+ S +  SLNH     SS          SSS   LD  Q H Q +  
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELD-SQNHLQQNSD 60

Query: 61  TTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAK----DLYSEDDDDDD 120
           T+L+L SH+SLP  WEQCLDLKTGEVYY N R GM+ +EDPR  +    D YSEDD    
Sbjct: 61  TSLELKSHLSLPYHWEQCLDLKTGEVYYINWRNGMKAREDPRITQEYNGDFYSEDD---- 120

Query: 121 DESSSDGDSEESCSSSSYGGSKQQYPR--ENEEEVLVVAGCKRCFMYFMVPKQVEGCPKC 180
               S  DSEES S SS   S++ Y    + E+ VLVVAGCK CFMYFMVPKQVE CPKC
Sbjct: 121 ----SSYDSEESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPKC 180

Query: 181 SSTRLVHFDRTHDNNGFP 189
           +  +L+HFDR+   NG P
Sbjct: 181 NG-QLLHFDRS--ENGSP 186

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: gi|1009167725|ref|XP_015902273.1| (PREDICTED: uncharacterized protein LOC107435229 [Ziziphus jujuba])

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32
Identity = 100/203 (49.26%), Postives = 124/203 (61.08%), Query Frame = 1


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSS---------SSSSSSPSSLDHEQR 60
           M +P+ A IT SL+ S +  SLN   +S+S   +SS         + SSSS SS   + R
Sbjct: 1   MAAPNMATITASLERSLQNCSLNQHSSSNSSGEASSGLGIGIGMAARSSSSASSSPDDNR 60

Query: 61  HHQLH-----TTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKD---- 120
               H     TTL+LNSHISLP  WEQCLDLKTGE+YY N R GM+ KEDPR   +    
Sbjct: 61  PENDHLPNTDTTLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRTTAEYSGG 120

Query: 121 LYSEDDDDDDDESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPK 180
            YSE+D   D E SS   SE S   SS   S+  YPR  ++ VLVVAGCK C MYFMVPK
Sbjct: 121 YYSEEDSSYDSEESS---SESSPPPSSC--SRGHYPRVEKDHVLVVAGCKSCLMYFMVPK 180

Query: 181 QVEGCPKCSSTRLVHFDRTHDNN 186
            VE CPKC+  +L+HFDR+ +++
Sbjct: 181 HVEDCPKCNG-QLLHFDRSENDS 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g09230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF89_CUCSA	1.2e-67	71.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1	[more]
A0A067JTH2_JATCU	5.0e-34	51.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1	[more]
A9PEE5_POPTR	1.9e-33	51.52	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1	[more]
B9GZB4_POPTR	1.6e-32	51.83	Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2	[more]
V4TQC8_9ROSI	2.8e-32	48.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032280mg PE=4 SV=1	[more]

BLAST of Cp4.1LG17g09230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	2.0e-29	43.54	unknown protein	[more]
AT1G28070.1	1.6e-23	42.55	unknown protein	[more]

BLAST of Cp4.1LG17g09230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119898\|ref\|XP_008459902.1\|	9.0e-69	72.14	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
gi\|449445588\|ref\|XP_004140554.1\|	1.7e-67	71.78	PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus]	[more]
gi\|802754658\|ref\|XP_012088745.1\|	7.2e-34	51.27	PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]	[more]
gi\|224053539\|ref\|XP_002297863.1\|	2.7e-33	51.52	Humj1 family protein [Populus trichocarpa]	[more]
gi\|1009167725\|ref\|XP_015902273.1\|	1.0e-32	49.26	PREDICTED: uncharacterized protein LOC107435229 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09230.1	Cp4.1LG17g09230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 63..98 score: 6.6
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 63..98 score: 3.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 1..188 score: 1.8
None	No IPR available	PANTHER	PTHR14791:SF27	SUBFAMILY NOT NAMED	coord: 1..188 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g09230	Cucsa.349290	Cucumber (Gy14) v1	cgycpeB0911
Cp4.1LG17g09230	CmaCh17G014110	Cucurbita maxima (Rimu)	cmacpeB389
Cp4.1LG17g09230	CmoCh17G013580	Cucurbita moschata (Rifu)	cmocpeB352
Cp4.1LG17g09230	CmoCh08G000190	Cucurbita moschata (Rifu)	cmocpeB851
Cp4.1LG17g09230	Cla001488	Watermelon (97103) v1	cpewmB341
Cp4.1LG17g09230	Csa6G091940	Cucumber (Chinese Long) v2	cpecuB322
Cp4.1LG17g09230	MELO3C022347	Melon (DHL92) v3.5.1	cpemeB284
Cp4.1LG17g09230	ClCG06G001810	Watermelon (Charleston Gray)	cpewcgB298
Cp4.1LG17g09230	CSPI06G07450	Wild cucumber (PI 183967)	cpecpiB323
Cp4.1LG17g09230	Lsi09G017610	Bottle gourd (USVL1VR-Ls)	cpelsiB249
Cp4.1LG17g09230	MELO3C022347.2	Melon (DHL92) v3.6.1	cpemedB332
Cp4.1LG17g09230	CsaV3_6G007850	Cucumber (Chinese Long) v3	cpecucB0403
Cp4.1LG17g09230	Bhi12G002136	Wax gourd	cpewgoB0389
Cp4.1LG17g09230	CsGy6G007470	Cucumber (Gy14) v2	cgybcpeB783
Cp4.1LG17g09230	Carg03813	Silver-seed gourd	carcpeB1359
Cp4.1LG17g09230	Carg11570	Silver-seed gourd	carcpeB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g09230	Cp4.1LG12g09920	Cucurbita pepo (Zucchini)	cpecpeB170

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g09230	Cucurbita maxima (Rimu)	cmacpeB914