Cp4.1LG12g09920 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTGTGTTCGAGAGGGAGCTTTCGTTTCGATCTTTAATTAATGCGTTTCTGAATCCATAAATTTGTCTTTATGATTAATGCCTTGCTTTCTAAATTCTCTCTCCCTCCCATACGGACTCCATCCGCCCTTCCCAGGATTCGGATTCCAAACCCTAGAATTAATTAATTTCTTACTTCCTTTTATCGTCCGCCATTTTCAGTTTTCTTTTCGTACGACCTCAGAAAAAGCTTTCTGGATTTCGGATTCCCTTGCCTTTCTTTCTTTCTTTCTTTTGTTTCTTTTGTTTCATTTTCTCCTCGGGAACACTAAATTAACTTTTCCATTCTATTCCGTTTGACTCTCTAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCTTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGTTCCGAGGACAGTAATGGCTTCCCATAAAAGAACGAACCACAATTTTTTAAAAATCAAACTGTGTTTGGGTTAATTCTGACATAATCATTGATTCTTTCTCTTTGGATTAATTTGGTGAGCAAAGGCAAATGGGGTTTAATTTCGTAGCTCGATGTATACGCCTCTCTCCCTCCCTTTGACGTTGTTTTATGAGTTTTAATTGTATGGATATATATTTTACAAAGCTTGAATTGAGAAGCTAAAGAAATAGAAAAGGAATCTGGGGGGGGCCGCCATGGATGTGTGAATGGGAGATGCAGAAAATATGCAGGCATGAATGGGATGATGGTCAACGACTCAAACGAAGAAGAAGGAATAACATTTTGCTCGTGAAGACAGCGACTCATTGCTTTCATTATTCCACAACCCTCTCTGATTGAATCGTACGCAATTAATTTTAATTTTTATGTTGTTTTTTTTTTATATGAATAATAATGTAACGAAATAATTAGAATGGAAATGAAAATGAGACATCCCACACACAACATATGCACA ATGATTACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCTTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGTTCCGAGGACAGTAATGGCTTCCCATAAAAGAACGAACCACAATTTTTTAAAAATCAAACTGTGTTTGGGTTAATTCTGACATAATCATTGATTCTTTCTCTTTGGATTAATTTGGTGAGCAAAGGCAAATGGGGTTTAATTTCGTAGCTCGATGTATACGCCTCTCTCCCTCCCTTTGACGTTGTTTTATGAGTTTTAATTGTATGGATATATATTTTACAAAGCTTGAATTGAGAAGCTAAAGAAATAGAAAAGGAATCTGGGGGGGGCCGCCATGGATGTGTGAATGGGAGATGCAGAAAATATGCAGGCATGAATGGGATGATGGTCAACGACTCAAACGAAGAAGAAGGAATAACATTTTGCTCGTGAAGACAGCGACTCATTGCTTTCATTATTCCACAACCCTCTCTGATTGAATCGTACGCAATTAATTTTAATTTTTATGTTGTTTTTTTTTTATATGAATAATAATGTAACGAAATAATTAGAATGGAAATGAAAATGAGACATCCCACACACAACATATGCACA ATGATTACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCTTCGTACGGTGCTAGTAGGCAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGTTCCGAGGACAGTAATGGCTTCCCATAA MITGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSEDSNGFP
BLAST of Cp4.1LG12g09920 vs. TrEMBL
Match: A0A0A0KF89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091940 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.7e-48 Identity = 100/115 (86.96%), Postives = 103/115 (89.57%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-22 Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TrEMBL
Match: B9RFX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.6e-22 Identity = 64/115 (55.65%), Postives = 76/115 (66.09%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2) HSP 1 Score: 111.3 bits (277), Expect = 8.0e-22 Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TrEMBL
Match: A9PEE5_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0001s13290g PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.0e-22 Identity = 66/117 (56.41%), Postives = 79/117 (67.52%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein) HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20 Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein) HSP 1 Score: 87.0 bits (214), Expect = 8.2e-18 Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. NCBI nr
Match: gi|449445588|ref|XP_004140554.1| (PREDICTED: uncharacterized protein LOC101221916 [Cucumis sativus]) HSP 1 Score: 199.9 bits (507), Expect = 2.4e-48 Identity = 100/115 (86.96%), Postives = 103/115 (89.57%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. NCBI nr
Match: gi|659119898|ref|XP_008459902.1| (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]) HSP 1 Score: 196.4 bits (498), Expect = 2.7e-47 Identity = 100/115 (86.96%), Postives = 104/115 (90.43%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. NCBI nr
Match: gi|802754658|ref|XP_012088745.1| (PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]) HSP 1 Score: 112.8 bits (281), Expect = 3.9e-22 Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. NCBI nr
Match: gi|255543154|ref|XP_002512640.1| (PREDICTED: uncharacterized protein LOC8275022 [Ricinus communis]) HSP 1 Score: 112.5 bits (280), Expect = 5.1e-22 Identity = 64/115 (55.65%), Postives = 76/115 (66.09%), Query Frame = 1
BLAST of Cp4.1LG12g09920 vs. NCBI nr
Match: gi|224053539|ref|XP_002297863.1| (Humj1 family protein [Populus trichocarpa]) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21 Identity = 66/117 (56.41%), Postives = 79/117 (67.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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