CmoCh11G007950 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACATAAGACATTGAAGATATCGATCGAAATCTCCGTCAAGAGAAGCGAAGAAAAAGACATCAGAATTACCGAAGAGGAAAATCAAATCGAACGCATCACCGATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGGTTTGCTAATTCATCTCGCCTCCTCCTTCTTCGTTCTTTGCAATTCAGCAATTCGAAAACCGCACTCTAAAATTATTTTAAATAAAATTTTGAAAATTTATTTATATCCTTCAAATTTGACATTTAAATTTTTGTTGTAATCTCAATAAATTTTAAAATTTAAATTTAGTCATGAAATTATTATTATTTTTATACAAATTAGTAATAAAATTATTTTTTACATGTATTTTCAAATAAAAGATCTTATGAATGATTTTTTTCTCAACAATAAACTAACCATATAAATTAATATTAGGCCAATTTTAATGAAAATACAAAGGATAATTTTTATACTATAAATTTCAAAAACTAGAATAAGATTAAAATATAGGAGCTAAAATTAAAAAAAAAAAAAAAAAAAAACTATTTTTTAAAGACAAATCTTACTTTAAAATGAGTTATTATTTTATTAACATATTTAGACATATAAATATAAACACATAAATGAGAATAAAACAGAGAAAATAATAATAAATGAGAATAATAAATAAATAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTGAAGTTGCAGAGCTTTCTCCTTCTTCATCGAGTTTTGTTGTTCTACAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA ACATAAGACATTGAAGATATCGATCGAAATCTCCGTCAAGAGAAGCGAAGAAAAAGACATCAGAATTACCGAAGAGGAAAATCAAATCGAACGCATCACCGATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA ATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA
BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 1
BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.1e-06 Identity = 27/92 (29.35%), Postives = 50/92 (54.35%), Query Frame = 1
BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.1e-06 Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 1
BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06 Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 5.5e-50 Identity = 171/371 (46.09%), Postives = 211/371 (56.87%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43 Identity = 164/375 (43.73%), Postives = 212/375 (56.53%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24 Identity = 126/321 (39.25%), Postives = 167/321 (52.02%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A087G8W1_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G231400 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TrEMBL
Match: F4K6X6_ARATH (Heat shock family protein OS=Arabidopsis thaliana GN=At5g20970 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.5e-15 Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 92.0 bits (227), Expect = 7.7e-19 Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 4.5e-11 Identity = 58/179 (32.40%), Postives = 85/179 (47.49%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TAIR10
Match: AT1G54400.1 (AT1G54400.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09 Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 1
BLAST of CmoCh11G007950 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-07 Identity = 27/92 (29.35%), Postives = 50/92 (54.35%), Query Frame = 1
BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 210.7 bits (535), Expect = 4.2e-51 Identity = 172/383 (44.91%), Postives = 214/383 (55.87%), Query Frame = 1
BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 7.9e-50 Identity = 171/371 (46.09%), Postives = 211/371 (56.87%), Query Frame = 1
BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 206.5 bits (524), Expect = 7.9e-50 Identity = 170/380 (44.74%), Postives = 211/380 (55.53%), Query Frame = 1
BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 2.5e-43 Identity = 164/375 (43.73%), Postives = 212/375 (56.53%), Query Frame = 1
BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 4.2e-35 Identity = 138/316 (43.67%), Postives = 169/316 (53.48%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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