CmoCh11G007950 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G007950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description23.2 kDa heat shock protein
LocationCmo_Chr11 : 3938717 .. 3940523 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATAAGACATTGAAGATATCGATCGAAATCTCCGTCAAGAGAAGCGAAGAAAAAGACATCAGAATTACCGAAGAGGAAAATCAAATCGAACGCATCACCGATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGGTTTGCTAATTCATCTCGCCTCCTCCTTCTTCGTTCTTTGCAATTCAGCAATTCGAAAACCGCACTCTAAAATTATTTTAAATAAAATTTTGAAAATTTATTTATATCCTTCAAATTTGACATTTAAATTTTTGTTGTAATCTCAATAAATTTTAAAATTTAAATTTAGTCATGAAATTATTATTATTTTTATACAAATTAGTAATAAAATTATTTTTTACATGTATTTTCAAATAAAAGATCTTATGAATGATTTTTTTCTCAACAATAAACTAACCATATAAATTAATATTAGGCCAATTTTAATGAAAATACAAAGGATAATTTTTATACTATAAATTTCAAAAACTAGAATAAGATTAAAATATAGGAGCTAAAATTAAAAAAAAAAAAAAAAAAAAACTATTTTTTAAAGACAAATCTTACTTTAAAATGAGTTATTATTTTATTAACATATTTAGACATATAAATATAAACACATAAATGAGAATAAAACAGAGAAAATAATAATAAATGAGAATAATAAATAAATAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTGAAGTTGCAGAGCTTTCTCCTTCTTCATCGAGTTTTGTTGTTCTACAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA

mRNA sequence

ACATAAGACATTGAAGATATCGATCGAAATCTCCGTCAAGAGAAGCGAAGAAAAAGACATCAGAATTACCGAAGAGGAAAATCAAATCGAACGCATCACCGATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA

Coding sequence (CDS)

ATGGATTCGAAAAATTACCAGGATTTTTCGCCTAGATGTGATTGGCGTGAGGATCATGATTCTCGTGTTCTTACCGTACCCCTTAAAGATTTTAGGAGCAGCCAACTGAAAGTCCAGGTGACATCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGATGACCGAAGGCAACAAGTGGCTCCGATTCTACAAGGAGCTAGATGTCCCCACCGATACTGACACCGACAACATCTCTGCCAAGTTCAAGGATGGCGTCCTCTTCGTCAAACACCCCAAAAAACTATCTGCCGCTACTTTCCCCAAAGCCGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGGGAAACCCAAAGTCGATCCCCAACCACCGGCCGAGCCTCCGAAGCCGGGGGCCGGGAAACCCAAAGCTGATCCCCGACCACCGGCCGAGCCTCCGAAGCCAGCGGCCGCAAAATCCTCAATCGACCCACCAACTGATCCACAAAATGCCCCAAAGAGCCGAAATGAGGAACGCCAATCACAATCAAGTAGCAAAAGAGCCCCCACTTCCCCAAGGATACAAGGTATAGACAAAGAATTAGAGGATCAGCAGAATCTCACACCCGGCCCACAAACTGTCCCACAGAGACAAAATGAGGAGCCTCAAGAACAGGCACATGGGGAACGAAGCCCCCCTCCCCAAAAGGAAAAAACAGAGGAGGAGAAGGCAAAAGCACACACAAATCTGAAGGAAGCTTCGAAGGAGACAAGAGATGAGGAAAGGGGGAAAGAAGAAATTGGGTCGAAAATGGGAGAGGGCAAAGGGAAGGAGGAGGAGGGCAGCCATGGAAGGGAAGAGAAGGAAGGTGAAGTTGCAGAGGAGAGGAGGAGGAGGAGGAGGAGTGAGGGAACGGTGGAAGAGAGTTTCCTGTGGAGAAGAGAAGGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTGAGGACAACTATGGTGACTTTGGTTTTGGGGATTGCTGTTCTTGTGATTCTGTATCTGAAAGTTACAAACAAAGGTCATGTGGATGAAGAATTGTGA
BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06
Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 1

Query: 12  RCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTE--------GNKWL--- 71
           R DWRE  D+  + V +   R   L+V+V     LR+SGER  E        G+ W    
Sbjct: 77  RVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREE 136

Query: 72  ----RFYKELDVPTDTDTDNISAKFKDGVLFVKHPK 93
               RF+++L +P + D D+I+A   +GVL V+  K
Sbjct: 137 RSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRK 172

BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 27/92 (29.35%), Postives = 50/92 (54.35%), Query Frame = 1

Query: 12  RCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTE----GNKWLR------ 71
           R DW+E  +   + + +   +  ++K++V   G LRVSGER  E    G++W R      
Sbjct: 72  RVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYG 131

Query: 72  -FYKELDVPTDTDTDNISAKFKDGVLFVKHPK 93
            F+++  +P + D +++ AK ++GVL +   K
Sbjct: 132 KFWRQFKLPDNVDMESVKAKLENGVLTINLTK 163

BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-06
Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 1

Query: 12  RCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTE----GNKWLR------ 71
           R DW+E  +  V+ V +   +   +K++V     LRVSGER  E    G+ W R      
Sbjct: 76  RVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYG 135

Query: 72  -FYKELDVPTDTDTDNISAKFKDGVL 87
            F+++  +P + D D++ AK ++GVL
Sbjct: 136 KFWRQFKLPQNVDLDSVKAKMENGVL 161

BLAST of CmoCh11G007950 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 1

Query: 12  RCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTE----GNKWLR------ 71
           R DW+E  +  V+ + +   +  ++KV+V     LRVSGER  E    G+ W R      
Sbjct: 68  RVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYG 127

Query: 72  -FYKELDVPTDTDTDNISAKFKDGVL 87
            F+++  +P + D D++ AK ++GVL
Sbjct: 128 KFWRQFRLPQNVDLDSVKAKLENGVL 153

BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.5e-50
Identity = 171/371 (46.09%), Postives = 211/371 (56.87%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +K +++F PR DW +  D+RVL V L  FRS+QLKVQVTSTGKLRVSGER     KWLRF
Sbjct: 7   AKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLSSGKWLRF 66

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKPKVDP 122
            KE+D+P D DTDNISAK + GVL+VK PKK SA +       PP + PKP     K   
Sbjct: 67  QKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATS----SNIPPVQQPKP-----KAQS 126

Query: 123 QPPAEPPKPGAGKPKADPRPPA------EPPKPAAAKSSIDPPTDPQNAPKSRNEERQ-- 182
           QPP    KP A  P   P  P       EPPKPAA ++++ PPT   NAP+S+NE  Q  
Sbjct: 127 QPPPSATKPTADPPTVRPNTPKSQNERPEPPKPAATETTVAPPTVGPNAPESQNERAQIP 186

Query: 183 ------------------SQSSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQNEEP 242
                             SQ+S K+ PT P+           +  T  P  +P+   E+ 
Sbjct: 187 YIKTNVKNYAPSQNDRPQSQASGKQIPTPPK----------PEKATGAPARIPKP--EKT 246

Query: 243 QEQAHGERSPPPQKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKEEEGS 302
                G+      K++  EEK KAHT L++A ++TR+E  GKEE      EG+ K EE  
Sbjct: 247 SSMGSGQPVEDLGKKEKTEEKGKAHTKLRDALEKTREE--GKEE------EGESKMEEKD 306

Query: 303 HGREEKEGEVAEERRRRRRSEGTVEESF-LWRREGYKQVIDGVVKELRTTMVTLVLGIAV 347
              +E+ GE    RRR+RRSE   EES  L RREGYKQVID VVKELRT MVTL LGIA 
Sbjct: 307 EKGKEEVGEEKRRRRRKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAA 348

BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 164/375 (43.73%), Postives = 212/375 (56.53%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +KN+++F PR DW    DS VL V L DF+S+QL+VQVTSTGKLRVSG+RM     WLRF
Sbjct: 9   AKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEVQVTSTGKLRVSGDRMLSNGTWLRF 68

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAAT-----FPKADPRPPAEPPKPAAGK 122
            KE+D+P D DTD ISAK + G+L+VK PKK SA +       ++ P+  ++ P PAA K
Sbjct: 69  EKEIDIPADADTDKISAKLEQGILYVKQPKKPSATSSNIPPVQQSKPKVQSQHP-PAATK 128

Query: 123 PKVDPQP--PAEPPKPGAGKPKAD--------PRPPAEPPKPAAAKSSID--------PP 182
           P  DP    P  P +   G P A            P    +      SID        P 
Sbjct: 129 PTADPPTVRPKAPNRRNEGLPTAFYPAIKTNLKNFPKSGDETGTPYPSIDAKKMHFHFPQ 188

Query: 183 TDPQNAPKSRNEERQSQSSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQNEEPQEQ 242
           T   NAPKS+N+  QSQ+S K+ PT  ++Q        +    P         +  P E 
Sbjct: 189 TVKPNAPKSQNDRPQSQASGKQIPTPLKLQ--------EATGAPALGETSSTGSGHPVED 248

Query: 243 AHGERSPPPQKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKEEEGSHGR 302
                    +K+KTEE K K+HT L++A ++TR+E + +EE+GSKM E +         +
Sbjct: 249 L-------AKKDKTEE-KGKSHTKLRDAQEKTREEGK-EEEVGSKMAEKE---------K 308

Query: 303 EEKEGEVAEERRRRRRSEGTVEESF-LWRREGYKQVIDGVVKELRTTMVTLVLGIAVLVI 354
           EE E E    RR +RRSE   EES  L RREGYKQVID VVKELRT MVTL LGIA  V+
Sbjct: 309 EEVEEEKMRRRRMKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAFVV 356

BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 126/321 (39.25%), Postives = 167/321 (52.02%), Query Frame = 1

Query: 53  MTEGNKWLRFYKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATF---PKADPRPPAE 112
           +T G KWLRF KE+D+P D DTD IS+K + G+L+VK PKK SA +    P  + R   E
Sbjct: 39  LTNG-KWLRFQKEIDIPDDADTDKISSKLEQGILYVKQPKKPSATSSNIPPSQNERD--E 98

Query: 113 PPKPAAGKPKVDPQPPAEPPKPGAGKPKADPRP-----------------PAEPPKPAAA 172
           P KPAA +P V       PP  G+  P++   P                  A+ PKPAA 
Sbjct: 99  PLKPAATEPTV------APPTVGSNAPESQSEPRSWIIIPAPDFRSFRNERADTPKPAAT 158

Query: 173 KSSIDPPTDPQNAPKSRNEERQSQSSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQ 232
           KS++ PPT   NAPKS+N+  +SQ+S K+ PT P+           +  T  P  +P  +
Sbjct: 159 KSTVYPPTVRPNAPKSQNDRPKSQASGKQIPTPPK----------PEEATGAPARIP--K 218

Query: 233 NEEPQEQAHGERSPPPQKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKE 292
           + E      G+      K++  E+K K HT L++A ++TR   R        +  GK K 
Sbjct: 219 SGETSSMGCGQPVEDLAKKEKTEDKGKIHTKLRDALEKTRRRRR--------LRRGKKKL 278

Query: 293 EEGSHGREEKEGEVAEERRRRRRSEGTVEESFLWRREGYKQVIDGVVKELRTTMVTLVLG 352
           E+    R E+ GE               E   L RREGYKQV+DGVVKELRT MVTL LG
Sbjct: 279 EK----RSEEMGE---------------ESGRLRRREGYKQVVDGVVKELRTNMVTLALG 307

Query: 353 IAVLVILYLKVTNKGHVDEEL 354
               VILYL ++ KGH +EEL
Sbjct: 339 ----VILYLNLSKKGHTEEEL 307

BLAST of CmoCh11G007950 vs. TrEMBL
Match: A0A087G8W1_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G231400 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 1

Query: 6   YQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRFYKE 65
           YQ+F P   W  + D+ VL   L  F+  QLKV VT+T KLR+SGER T GNKW+RF++E
Sbjct: 10  YQNFEPATRWTSEPDAEVLVADLPGFKKEQLKVAVTATRKLRLSGERPTLGNKWIRFHQE 69

Query: 66  LDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPP 112
           + VP   D D +SA FKD  L+++HPK       P+     P +PP
Sbjct: 70  IPVPMTADIDTVSAMFKDNKLYIRHPK--IKTEIPQTKTPSPVKPP 113

BLAST of CmoCh11G007950 vs. TrEMBL
Match: F4K6X6_ARATH (Heat shock family protein OS=Arabidopsis thaliana GN=At5g20970 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-15
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1

Query: 6   YQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRFYKE 65
           YQ+F P   W  + D+ VL   L  F+  QLKV VT+T KLR++GER T GNKW+RF++E
Sbjct: 10  YQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFHQE 69

Query: 66  LDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKP------K 125
           + VP   D D++SA FKD  L+++HPK  +          P  +PP P   KP      K
Sbjct: 70  IPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEI--------PQTKPPTPVIMKPHDQHERK 129

Query: 126 VDPQPPAEPPKPGAGK 136
               P A   KP  GK
Sbjct: 130 QGQGPKAMVEKPSGGK 137

BLAST of CmoCh11G007950 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-19
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1

Query: 6   YQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRFYKE 65
           YQ+F P   W  + D+ VL   L  F+  QLKV VT+T KLR++GER T GNKW+RF++E
Sbjct: 10  YQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFHQE 69

Query: 66  LDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKP------K 125
           + VP   D D++SA FKD  L+++HPK  +          P  +PP P   KP      K
Sbjct: 70  IPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEI--------PQTKPPTPVIMKPHDQHERK 129

Query: 126 VDPQPPAEPPKPGAGK 136
               P A   KP  GK
Sbjct: 130 QGQGPKAMVEKPSGGK 137

BLAST of CmoCh11G007950 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-11
Identity = 58/179 (32.40%), Postives = 85/179 (47.49%), Query Frame = 1

Query: 6   YQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRFYKE 65
           Y +F P  +W+ +     LT+ L  FR  QLKVQVT+T KLRV G+R    NKW+RF KE
Sbjct: 14  YDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKWIRFRKE 73

Query: 66  LDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKPKVDPQPP 125
             +P + D D++SAKF+   L V+ P+             P  + P P     K  P P 
Sbjct: 74  FPIPPNIDVDSVSAKFEGANLVVRLPR-----------TEPMGKQPSPIGTATKPPPVPK 133

Query: 126 AEP--PKPGAGKPKADPRPPAEPPKPAAAKSSIDPPTDPQNAPKSRNEERQSQSSSKRA 183
             P  P P A K K  P     P +    ++ ++   +   +PK   E  ++ +   R+
Sbjct: 134 ENPNLPSPSA-KEKVQP-----PKETRENETELEKQAEKIQSPKPARENEEALNQDYRS 175

BLAST of CmoCh11G007950 vs. TAIR10
Match: AT1G54400.1 (AT1G54400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 1

Query: 6   YQDFSPRCDWREDHDSRVLTVPLKD-FRSSQLKVQVTSTGKLRVSGERMTEGNKWLRFYK 65
           Y +  P C WR   D  +L + L    +   LK+Q+ ++G L ++G    +  K +RF K
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITGGCPVDQTKTIRFMK 72

Query: 66  ELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAA 98
           E  V  D   + I AKF  GVL+V  PK +  A
Sbjct: 73  ETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIA 105

BLAST of CmoCh11G007950 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-07
Identity = 27/92 (29.35%), Postives = 50/92 (54.35%), Query Frame = 1

Query: 12  RCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTE----GNKWLR------ 71
           R DW+E  +   + + +   +  ++K++V   G LRVSGER  E    G++W R      
Sbjct: 72  RVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYG 131

Query: 72  -FYKELDVPTDTDTDNISAKFKDGVLFVKHPK 93
            F+++  +P + D +++ AK ++GVL +   K
Sbjct: 132 KFWRQFKLPDNVDMESVKAKLENGVLTINLTK 163

BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 4.2e-51
Identity = 172/383 (44.91%), Postives = 214/383 (55.87%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +KN+++F PR DW    DS VL V L  FRS+QLKVQVTSTGKLRVSGER     KWLRF
Sbjct: 7   AKNFEEFEPRFDWVHHPDSHVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLGNGKWLRF 66

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKPKVDP 122
            KE+D+P D DTD ISAK ++G+L+VK PKKL   +       PP + PKP     K   
Sbjct: 67  EKEIDIPADADTDKISAKLEEGILYVKQPKKLPTTS----SNIPPVQQPKP-----KAQS 126

Query: 123 QPPAEPPKPGAGKPKADPRPP------AEPPKPAAAKSSIDPPTDPQNAPKSRNEERQSQ 182
           QPP    KP A  P   P  P      AEPPKPAA + ++ PPT    AP+S+NE     
Sbjct: 127 QPPPAATKPTADPPTVRPSVPKSRNERAEPPKPAATEPTVAPPTVGPKAPESQNERADVP 186

Query: 183 SSSKRAPTSPRIQGIDKELEDQQNLTPGP---QTVPQRQNEEPQEQAHGERSPPP----- 242
           S+             D +  + +N  P P      P+ QN+ PQ QA G++ P P     
Sbjct: 187 ST-------------DAKKTNVKNYAPRPTVGPNAPKSQNDRPQSQASGKQIPTPPKPEE 246

Query: 243 -----------------QKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGK 302
                            +K+KT EEK KAHT L++A ++TR+E  GKE            
Sbjct: 247 ATGAPSMGSGQPVEDLAKKDKT-EEKGKAHTKLQDALEKTREE--GKE------------ 306

Query: 303 EEEGSHGREEKEGEVAEERRRRRRSEGTVEE-----SFLWRREGYKQVIDGVVKELRTTM 350
           EE GS   EE++ EV EE+RRRRR +   EE       L RREGYKQVIDGVVKE+RT M
Sbjct: 307 EEGGSKKAEEQKEEVGEEKRRRRRMKRRNEEMGEESGRLRRREGYKQVIDGVVKEIRTNM 352

BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 7.9e-50
Identity = 171/371 (46.09%), Postives = 211/371 (56.87%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +K +++F PR DW +  D+RVL V L  FRS+QLKVQVTSTGKLRVSGER     KWLRF
Sbjct: 7   AKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLSSGKWLRF 66

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKPKVDP 122
            KE+D+P D DTDNISAK + GVL+VK PKK SA +       PP + PKP     K   
Sbjct: 67  QKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATS----SNIPPVQQPKP-----KAQS 126

Query: 123 QPPAEPPKPGAGKPKADPRPPA------EPPKPAAAKSSIDPPTDPQNAPKSRNEERQ-- 182
           QPP    KP A  P   P  P       EPPKPAA ++++ PPT   NAP+S+NE  Q  
Sbjct: 127 QPPPSATKPTADPPTVRPNTPKSQNERPEPPKPAATETTVAPPTVGPNAPESQNERAQIP 186

Query: 183 ------------------SQSSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQNEEP 242
                             SQ+S K+ PT P+           +  T  P  +P+   E+ 
Sbjct: 187 YIKTNVKNYAPSQNDRPQSQASGKQIPTPPK----------PEKATGAPARIPKP--EKT 246

Query: 243 QEQAHGERSPPPQKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKEEEGS 302
                G+      K++  EEK KAHT L++A ++TR+E  GKEE      EG+ K EE  
Sbjct: 247 SSMGSGQPVEDLGKKEKTEEKGKAHTKLRDALEKTREE--GKEE------EGESKMEEKD 306

Query: 303 HGREEKEGEVAEERRRRRRSEGTVEESF-LWRREGYKQVIDGVVKELRTTMVTLVLGIAV 347
              +E+ GE    RRR+RRSE   EES  L RREGYKQVID VVKELRT MVTL LGIA 
Sbjct: 307 EKGKEEVGEEKRRRRRKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAA 348

BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 7.9e-50
Identity = 170/380 (44.74%), Postives = 211/380 (55.53%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +KN+++F PR DW    DS VL V L  FRS+QLKVQVTSTGKLRVSGER     KWLRF
Sbjct: 7   AKNFEEFEPRFDWVHHPDSHVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLGNGKWLRF 66

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATFPKADPRPPAEPPKPAAGKPKVDP 122
            KE+D+P D DTD ISAK ++G+L+VK PKKL   +       PP + PKP     K   
Sbjct: 67  EKEIDIPADADTDKISAKLEEGILYVKQPKKLPTTS----SNIPPVQQPKP-----KAQS 126

Query: 123 QPPAEPPKPGAGKPKADPRPP------AEPPKPAAAKSSIDPPTDPQNAPKSRNEERQSQ 182
           QPP    KP A  P   P  P      AEPPKPAA + ++ PPT    AP+S+NE     
Sbjct: 127 QPPPAATKPTADPPTVRPSVPKSRNERAEPPKPAATEPTVAPPTVGPKAPESQNERADVP 186

Query: 183 SSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQNEEPQEQAHGERSPPP-------- 242
           S+             D +  + +N  P        QN+ PQ QA G++ P P        
Sbjct: 187 ST-------------DAKKTNVKNYAPS-------QNDRPQSQASGKQIPTPPKPEEATG 246

Query: 243 --------------QKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKEEE 302
                         +K+KT EEK KAHT L++A ++TR+E  GKE            EE 
Sbjct: 247 APSMGSGQPVEDLAKKDKT-EEKGKAHTKLQDALEKTREE--GKE------------EEG 306

Query: 303 GSHGREEKEGEVAEERRRRRRSEGTVEE-----SFLWRREGYKQVIDGVVKELRTTMVTL 350
           GS   EE++ EV EE+RRRRR +   EE       L RREGYKQVIDGVVKE+RT MVTL
Sbjct: 307 GSKKAEEQKEEVGEEKRRRRRMKRRNEEMGEESGRLRRREGYKQVIDGVVKEIRTNMVTL 342

BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 2.5e-43
Identity = 164/375 (43.73%), Postives = 212/375 (56.53%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +KN+++F PR DW    DS VL V L DF+S+QL+VQVTSTGKLRVSG+RM     WLRF
Sbjct: 9   AKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEVQVTSTGKLRVSGDRMLSNGTWLRF 68

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAAT-----FPKADPRPPAEPPKPAAGK 122
            KE+D+P D DTD ISAK + G+L+VK PKK SA +       ++ P+  ++ P PAA K
Sbjct: 69  EKEIDIPADADTDKISAKLEQGILYVKQPKKPSATSSNIPPVQQSKPKVQSQHP-PAATK 128

Query: 123 PKVDPQP--PAEPPKPGAGKPKAD--------PRPPAEPPKPAAAKSSID--------PP 182
           P  DP    P  P +   G P A            P    +      SID        P 
Sbjct: 129 PTADPPTVRPKAPNRRNEGLPTAFYPAIKTNLKNFPKSGDETGTPYPSIDAKKMHFHFPQ 188

Query: 183 TDPQNAPKSRNEERQSQSSSKRAPTSPRIQGIDKELEDQQNLTPGPQTVPQRQNEEPQEQ 242
           T   NAPKS+N+  QSQ+S K+ PT  ++Q        +    P         +  P E 
Sbjct: 189 TVKPNAPKSQNDRPQSQASGKQIPTPLKLQ--------EATGAPALGETSSTGSGHPVED 248

Query: 243 AHGERSPPPQKEKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGKGKEEEGSHGR 302
                    +K+KTEE K K+HT L++A ++TR+E + +EE+GSKM E +         +
Sbjct: 249 L-------AKKDKTEE-KGKSHTKLRDAQEKTREEGK-EEEVGSKMAEKE---------K 308

Query: 303 EEKEGEVAEERRRRRRSEGTVEESF-LWRREGYKQVIDGVVKELRTTMVTLVLGIAVLVI 354
           EE E E    RR +RRSE   EES  L RREGYKQVID VVKELRT MVTL LGIA  V+
Sbjct: 309 EEVEEEKMRRRRMKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAFVV 356

BLAST of CmoCh11G007950 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 4.2e-35
Identity = 138/316 (43.67%), Postives = 169/316 (53.48%), Query Frame = 1

Query: 3   SKNYQDFSPRCDWREDHDSRVLTVPLKDFRSSQLKVQVTSTGKLRVSGERMTEGNKWLRF 62
           +KN+Q+F PR DW    DS VL V L  FRS+QLKVQVTSTGKLRVSGER     KWLRF
Sbjct: 7   AKNFQEFEPRYDWVHHPDSHVLVVRLSGFRSNQLKVQVTSTGKLRVSGERKLGNGKWLRF 66

Query: 63  YKELDVPTDTDTDNISAKFKDGVLFVKHPKKLSAATF---PKADPRP-PAEPPKPAAGKP 122
            KE+D+P D DTD ISAK ++G+L+VK PKKLSA +    P   P+P P   P PAA KP
Sbjct: 67  EKEIDIPADADTDKISAKLEEGILYVKQPKKLSATSSNIPPVQQPKPKPQSQPPPAATKP 126

Query: 123 KVDPQPPAEPPKPGAGKPKADPRPPAEPPKPAAAKSSIDPPTDPQNAPKSRNEERQSQSS 182
             DP P   P  P +   +      +EPPKPAA + ++ PPT    AP+S+NE       
Sbjct: 127 TADP-PTVRPSAPKSQNER------SEPPKPAATEPTVAPPTVGPKAPESQNERAD---- 186

Query: 183 SKRAPTSPRIQGIDKELEDQQNLTPGP---QTVPQRQNEEPQEQAHGERSPPPQK----- 242
                    I  ID    +  N  P P      P+ QN+ PQ QA G++ P P K     
Sbjct: 187 ---------IPSIDARKTNYINYAPRPTVGPNAPKSQNDRPQSQASGKQIPTPPKPEEAT 246

Query: 243 ---------------------EKTEEEKAKAHTNLKEASKETRDEERGKEEIGSKMGEGK 286
                                EKT EEK KAHT L++A ++TR+E  GKEE G     G 
Sbjct: 247 GAPAETSSMGSGQPVEDLAKNEKT-EEKGKAHTKLQDAVEKTREE--GKEEEGGSKNGGG 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HS232_ORYSJ1.4e-0634.3823.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2[more]
HSP22_ARATH3.1e-0629.3522.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1[more]
HSP41_PEA4.1e-0632.5622.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1[more]
HSP41_SOYBN7.0e-0632.5622.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M2E7_CUCSA5.5e-5046.09Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1[more]
A0A0A0LWW1_CUCSA1.7e-4343.73Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1[more]
A0A0A0LZR6_CUCSA1.4e-2439.25Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1[more]
A0A087G8W1_ARAAL2.8e-1746.23Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G231400 PE=3 SV=1[more]
F4K6X6_ARATH1.5e-1541.91Heat shock family protein OS=Arabidopsis thaliana GN=At5g20970 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G20970.17.7e-1941.91 HSP20-like chaperones superfamily protein[more]
AT2G27140.14.5e-1132.40 HSP20-like chaperones superfamily protein[more]
AT1G54400.11.9e-0934.41 HSP20-like chaperones superfamily protein[more]
AT4G10250.11.8e-0729.35 HSP20-like chaperones superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659100301|ref|XP_008451025.1|4.2e-5144.91PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X... [more]
gi|778665351|ref|XP_004144143.2|7.9e-5046.09PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus][more]
gi|659100303|ref|XP_008451026.1|7.9e-5044.74PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis m... [more]
gi|700211274|gb|KGN66370.1|2.5e-4343.73hypothetical protein Csa_1G600100 [Cucumis sativus][more]
gi|659100306|ref|XP_008451028.1|4.2e-3543.67PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G007950.1CmoCh11G007950.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 14..96
score: 3.
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 14..92
score: 11
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 5..95
score: 1.4
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 5..93
score: 6.28
NoneNo IPR availableunknownCoilCoilcoord: 230..250
scor
NoneNo IPR availablePANTHERPTHR11527:SF156HEAT SHOCK FAMILY PROTEINcoord: 6..115
score: 4.0