Csa1G600080 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G600080
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNucleolar and coiled-body phosphoprotein 1
LocationChr1 : 23088845 .. 23091565 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGATCCTTCTTCTTCTGCTAAAAACTTCGAGAAATTTGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCATGTTCTCGTCGTTCACCTCTCAGGTTTCATCATATTCCCCCTAAGTTCATTTCAGTTTTAATTTTAACGTACATAGGGATTGGGAAATGGAAATTTAACTTTTAATTACACTCTCAATTATAAAGTTCGAAAGTCTAATTTTAATAATAACTAAGTTTTAAAGGTATAATTAGGGTATTAGAAAAAATTAAACACTACATTTTAAATGAGTGTTACATTTTAGGCAAAATTTTAAAATAATTACCATTTTAATTTTTGGTAGATTTTCACTTCCCATTTCTTGTGCCTTTAAAAGGCAACAAAAATCACTCAAACAAAAATTAACTCCAACACAAATATATTTGTGATAGTTGCAAATTTAGCGATTAAATTTAAAATAATTAAATATACAACAACATTTTTAAAAAATTGCAAATATAGTAAAATTTGTCAAATTTTATCAATGATAGAGTCTATCACGGATAGACGACCATGTTATAAAAATTAACATTCTATCACACGAGTCTATGAGTGATACAAGCCTAAATTTTTATGAGAAAACGGATGAAAATATTTATAAAATAGGATTTTCTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCAACTGTTCGACCAAATGCCCGAAAGAGACTAGACGAAACAGTCGACACTGCATTCTATCCTGGCACAAAAACCTATCTCAAAATCGTCCCAAAGAGCGAAGACGGAATAGCCAAGCAATCAATCAATCCCAAAAAATACCATGCCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAATGAGAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGGGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGGCGAGACATCCTCCATAGGCAGTGGACAGCCAGTTGAAGATTTAGCTAAGAAGGAAAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAGAAGACAAGAGAAGACGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGCAGAGAAGGAGAAAGAAGAAGTTGGAATAGCCAAGCCATCAATCGATGCCAAAAAGTTCCATGTCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAACGACAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGAAGCAACCGGAGCACCCGCGAGTATCCCAAAACCCGGCGAGACATCCTCCATGGGCAGTGGACAGCCAATTGAAGATTTAGCTAAGGAGGACAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAAAAGACAAGTGAAGAAGGTGGGTCAAAAATGGCGGAGAAGGAGAAAGAAGAAGTTGAAAAAGAGAAGAGGAGGAGGATGAAGAGAATGATTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAAGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTAAGGACAAATATGGTGACTTTGGCTTTGGGGGTTGCTGTCTTTGGGATTTTGTATCTGAATCTTTCAAAGAAGGGTCATGTGGAGGAAGAGTTGTGAAGAAGGTATGAATGAATGGAATTCTAGTTTGGGTGAACAAAAATATGTGAAAGAGCTTGTTCCAAGAG

mRNA sequence

ATGGCCATGGATCCTTCTTCTTCTGCTAAAAACTTCGAGAAATTTGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCATGTTCTCGTCGTTCACCTCTCAGTCGACACTGCATTCTATCCTGGCACAAAAACCTATCTCAAAATCGTCCCAAAGAGCGAAGACGGAATAGCCAAGCAATCAATCAATCCCAAAAAATACCATGCCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAATGAGAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGGGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGGCGAGACATCCTCCATAGGCAGTGGACAGCCAGTTGAAGATTTAGCTAAGAAGGAAAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAGAAGACAAGAGAAGACGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGCAGAGAAGGAGAAAGAAGAAGTTGGAATAGCCAAGCCATCAATCGATGCCAAAAAGTTCCATGTCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAACGACAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGAAGCAACCGGAGCACCCGCGAGTATCCCAAAACCCGGCGAGACATCCTCCATGGGCAGTGGACAGCCAATTGAAGATTTAGCTAAGGAGGACAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAAAAGACAAGTGAAGAAGGTGGGTCAAAAATGGCGGAGAAGGAGAAAGAAGAAGTTGAAAAAGAGAAGAGGAGGAGGATGAAGAGAATGATTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAAGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTAAGGACAAATATGGTGACTTTGGCTTTGGGGGTTGCTGTCTTTGGGATTTTGTATCTGAATCTTTCAAAGAAGGGTCATGTGGAGGAAGAGTTGTGA

Coding sequence (CDS)

ATGGCCATGGATCCTTCTTCTTCTGCTAAAAACTTCGAGAAATTTGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCATGTTCTCGTCGTTCACCTCTCAGTCGACACTGCATTCTATCCTGGCACAAAAACCTATCTCAAAATCGTCCCAAAGAGCGAAGACGGAATAGCCAAGCAATCAATCAATCCCAAAAAATACCATGCCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAATGAGAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGGGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGGCGAGACATCCTCCATAGGCAGTGGACAGCCAGTTGAAGATTTAGCTAAGAAGGAAAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAGAAGACAAGAGAAGACGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGCAGAGAAGGAGAAAGAAGAAGTTGGAATAGCCAAGCCATCAATCGATGCCAAAAAGTTCCATGTCCCACGAAGTGTTGGAGCAAATCCCCCAAAGAGCCAAAACGACAGGCCTCAATCACAAGCAAGTGGGAAACAAATCCCCACTCCTCCAAAGCCACAGGAAGCAACCGGAGCACCCGCGAGTATCCCAAAACCCGGCGAGACATCCTCCATGGGCAGTGGACAGCCAATTGAAGATTTAGCTAAGGAGGACAAAACAGAGGAGAAGGGGAAAGCACATACAAAACTACAGGATGCTTTGGAAAAGACAAGTGAAGAAGGTGGGTCAAAAATGGCGGAGAAGGAGAAAGAAGAAGTTGAAAAAGAGAAGAGGAGGAGGATGAAGAGAATGATTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAAGGTACAAACAGGTTATTGATGGGGTGGTGAAGGAATTAAGGACAAATATGGTGACTTTGGCTTTGGGGGTTGCTGTCTTTGGGATTTTGTATCTGAATCTTTCAAAGAAGGGTCATGTGGAGGAAGAGTTGTGA

Protein sequence

MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAKQSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL*
Homology
[Close]
BLAST of Csa1G600080 vs. TrEMBL
Match: A0A0A0LX62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600080 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 2.0e-201
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 1 

Query: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK 60
           MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK
Sbjct: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK 60

Query: 61  QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI 120
           QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI
Sbjct: 61  QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI 120

Query: 121 GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI 180
           GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI
Sbjct: 121 GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI 180

Query: 181 DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG 240
           DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG
Sbjct: 181 DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG 240

Query: 241 QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM 300
           QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM
Sbjct: 241 QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM 300

Query: 301 GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL 356
           GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL
Sbjct: 301 GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL 355

[Close]
BLAST of Csa1G600080 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-72
Identity = 179/369 (48.51%), Postives = 224/369 (60.70%), Query Frame = 1 

Query: 3   MDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLS---VDTAFYPGTKT-YLKIVPKSEDGI 62
           MDPSSSAK FE+FEPRFDWVDHPD+ VLVVHLS    +      T T  L++  + +   
Sbjct: 1   MDPSSSAKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLSS 60

Query: 63  AKQSINPKKYHAPRSVGANPPKS----------QNERPQSQASGKQIPTPPKPQGATGAP 122
            K     K+   P     +   +          Q ++P + +S       PKP+  +  P
Sbjct: 61  GKWLRFQKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATSSNIPPVQQPKPKAQSQPP 120

Query: 123 ARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEK 182
               KP  T+   + +P    ++ E+ E    A T+   A      +  E       ++ 
Sbjct: 121 PSATKP--TADPPTVRPNTPKSQNERPEPPKPAATETTVAPPTVGPNAPE-------SQN 180

Query: 183 EKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASI 242
           E+ ++   K ++             N   SQNDRPQSQASGKQIPTPPKP++ATGAPA I
Sbjct: 181 ERAQIPYIKTNV------------KNYAPSQNDRPQSQASGKQIPTPPKPEKATGAPARI 240

Query: 243 PKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKT-----SEEGGSKMAEKE-- 302
           PKP +TSSMGSGQP+EDL K++KTEEKGKAHTKL+DALEKT      EEG SKM EK+  
Sbjct: 241 PKPEKTSSMGSGQPVEDLGKKEKTEEKGKAHTKLRDALEKTREEGKEEEGESKMEEKDEK 300

Query: 303 -KEEV-EKEKRRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFG 349
            KEEV E+++RRR KR  EEMGEESGRLRRRE YKQVID VVKELRTNMVTLALG+A F 
Sbjct: 301 GKEEVGEEKRRRRRKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAFV 348

[Close]
BLAST of Csa1G600080 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.0e-69
Identity = 149/197 (75.63%), Postives = 160/197 (81.22%), Query Frame = 1 

Query: 168 KEKEEVGIAKPSIDAKK--FHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAP 227
           K  +E G   PSIDAKK  FH P++V  N PKSQNDRPQSQASGKQIPTP K QEATGAP
Sbjct: 164 KSGDETGTPYPSIDAKKMHFHFPQTVKPNAPKSQNDRPQSQASGKQIPTPLKLQEATGAP 223

Query: 228 ASIPKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEG-----GSKMAEK 287
           A     GETSS GSG P+EDLAK+DKTEEKGK+HTKL+DA EKT EEG     GSKMAEK
Sbjct: 224 AL----GETSSTGSGHPVEDLAKKDKTEEKGKSHTKLRDAQEKTREEGKEEEVGSKMAEK 283

Query: 288 EKEEVEKEK--RRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVF 347
           EKEEVE+EK  RRRMKR  EEMGEESGRLRRRE YKQVID VVKELRTNMVTLALG+A F
Sbjct: 284 EKEEVEEEKMRRRRMKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAF 343

Query: 348 GILYLNLSKKGHVEEEL 356
            +LYLNLSK GH+EEEL
Sbjct: 344 VVLYLNLSKNGHMEEEL 356

[Close]
BLAST of Csa1G600080 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 100/140 (71.43%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 38  TAFYPGTKTYLKIVPKSED--GIAKQSINPKK--YHAPRSVGANPPKSQNERPQSQASGK 97
           TAFYP  KT LK  PKS D  G    SI+ KK  +H P++V  N PKSQN+RPQSQASGK
Sbjct: 149 TAFYPAIKTNLKNFPKSGDETGTPYPSIDAKKMHFHFPQTVKPNAPKSQNDRPQSQASGK 208

Query: 98  QIPTPPKPQGATGAPARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTR 157
           QIPTP K Q ATGAPA     GETSS GSG PVEDLAKK+KTEEKGK+HTKL+DA EKTR
Sbjct: 209 QIPTPLKLQEATGAPAL----GETSSTGSGHPVEDLAKKDKTEEKGKSHTKLRDAQEKTR 268

Query: 158 EDGKEEEGGSKMAEKEKEEV 174
           E+GKEEE GSKMAEKEKEEV
Sbjct: 269 EEGKEEEVGSKMAEKEKEEV 284


HSP 2 Score: 152.9 bits (385), Expect = 7.3e-34
Identity = 132/400 (33.00%), Postives = 172/400 (43.00%), Query Frame = 1 

Query: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHL--------------------SVDTAF 60
           MAM+PSSSAKNFE+FEPRFDWV HPDSHVLVVHL                    S D   
Sbjct: 1   MAMNPSSSAKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEVQVTSTGKLRVSGDRML 60

Query: 61  YPGTKTYL-------------KIVPKSEDGIAKQSINPKKYHAPRSVGANPPKSQNERPQ 120
             GT                 KI  K E GI      PKK   P +  +N P  Q  +P+
Sbjct: 61  SNGTWLRFEKEIDIPADADTDKISAKLEQGILYVK-QPKK---PSATSSNIPPVQQSKPK 120

Query: 121 SQASGKQIPTPPKPQGAT-----------GAPARIPKPGETSSIGSGQPVEDLAKKEKTE 180
            Q+      T P     T           G P       +T+     +  ++      + 
Sbjct: 121 VQSQHPPAATKPTADPPTVRPKAPNRRNEGLPTAFYPAIKTNLKNFPKSGDETGTPYPSI 180

Query: 181 EKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSIDAKKFHVPRSVGA-NP 240
           +  K H      ++      + +   S+ + K+       + +  A       S G+ +P
Sbjct: 181 DAKKMHFHFPQTVKPNAPKSQNDRPQSQASGKQIPTPLKLQEATGAPALGETSSTGSGHP 240

Query: 241 PKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSGQPIEDLAKEDKTEEK 300
            +    + +++  GK        QE T       + G+   +GS   + +  KE+  EEK
Sbjct: 241 VEDLAKKDKTEEKGKSHTKLRDAQEKT------REEGKEEEVGS--KMAEKEKEEVEEEK 300

Query: 301 GKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEMGEESGRLRRRERYKQ 356
            +                                 RRMKR  EEMGEESGRLRRRE YKQ
Sbjct: 301 MRR--------------------------------RRMKRRSEEMGEESGRLRRREGYKQ 356


HSP 3 Score: 226.5 bits (576), Expect = 5.2e-56
Identity = 124/185 (67.03%), Postives = 140/185 (75.68%), Query Frame = 1 

Query: 171 EEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPK 230
           E     KP+   K    P +V  N PKSQNDRP+SQASGKQIPTPPKP+EATGAPA IPK
Sbjct: 139 ERADTPKPAA-TKSTVYPPTVRPNAPKSQNDRPKSQASGKQIPTPPKPEEATGAPARIPK 198

Query: 231 PGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKR 290
            GETSSMG GQP+EDLAK++KTE+KGK HTKL+DALEKT          + +  + + K+
Sbjct: 199 SGETSSMGCGQPVEDLAKKEKTEDKGKIHTKLRDALEKT----------RRRRRLRRGKK 258

Query: 291 RRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGH 350
           +  KR  EEMGEESGRLRRRE YKQV+DGVVKELRTNMVTLALGV    ILYLNLSKKGH
Sbjct: 259 KLEKRS-EEMGEESGRLRRREGYKQVVDGVVKELRTNMVTLALGV----ILYLNLSKKGH 307

Query: 351 VEEEL 356
            EEEL
Sbjct: 319 TEEEL 307

[Close]
BLAST of Csa1G600080 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 75/104 (72.12%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 71  PRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSIGSGQPVEDLA 130
           P +V  N PKSQN+RP+SQASGKQIPTPPKP+ ATGAPARIPK GETSS+G GQPVEDLA
Sbjct: 155 PPTVRPNAPKSQNDRPKSQASGKQIPTPPKPEEATGAPARIPKSGETSSMGCGQPVEDLA 214

Query: 131 KKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVG 175
           KKEKTE+KGK HTKL+DALEKTR   +   G  K+ EK  EE+G
Sbjct: 215 KKEKTEDKGKIHTKLRDALEKTRRRRRLRRGKKKL-EKRSEEMG 257


HSP 2 Score: 71.2 bits (173), Expect = 2.8e-09
Identity = 80/289 (27.68%), Postives = 116/289 (40.14%), Query Frame = 1 

Query: 57   GIAKQSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGE 116
            G   +++  KK   PR     PP  +   P  +      P      GA+GA A  P  GE
Sbjct: 1175 GATLETVAAKKKAPPRKSLPGPPGGKKGVPGVK------PDEGGAGGASGAKAGAPSKGE 1234

Query: 117  TSSIG---------SGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAE 176
                          + +P E+ AK+EK E K +  T  ++  E + E   E++ GS+ A+
Sbjct: 1235 DEKAPLTPMDEDKKAEKPEEETAKEEKAE-KAQEETAKEEKRESSDEATGEKKEGSEEAK 1294

Query: 177  KEKEEV----------GIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPK 236
            +EK+E           G    ++ AKK   PR     PP            GK+     K
Sbjct: 1295 EEKKETLPGEAEGKAGGATLETVAAKKKAPPRKSLPGPP-----------GGKKGVPGVK 1354

Query: 237  PQE-----ATGAPASIPKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKTSEE 296
            P E     A+GA A  P  GE        P+     EDK  EK +  T  ++ +EK  EE
Sbjct: 1355 PDEGGAGGASGAKAGAPSKGEDEKA----PLTP-KDEDKKAEKPEEETAKEEKVEKAQEE 1414

Query: 297  GGSKMAEKEKEEVEKEKRRRMKRMIEEMGEE--SGRLRRRERYKQVIDG 320
                 A++EK E   E     K  +EE  EE   G    +E  K+++ G
Sbjct: 1415 ----TAKEEKRESSDEATGEKKEGLEEAKEEKKEGLEEAKEEKKEILPG 1436

[Close]
BLAST of Csa1G600080 vs. TAIR10
Match: AT1G76720.1 (AT1G76720.1 eukaryotic translation initiation factor 2 (eIF-2) family protein)

HSP 1 Score: 49.3 bits (116), Expect = 5.7e-06
Identity = 38/137 (27.74%), Postives = 55/137 (40.15%), Query Frame = 1 

Query: 159 EEGGSKMAEKEKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKP 218
           E  G K  EKE  E   AK     K+    +   A    S   + + Q      P  PK 
Sbjct: 281 ENAGEKEGEKETVETAAAKKKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEPLQPKK 340

Query: 219 QEATGAPASIPKPGETSSMGSG----QPIEDLAKEDKTEE--KGKAHTKLQDALEKTSEE 278
           ++A G  A    P     M       Q  E+  K+++ E+  K +   + Q+ LE  +EE
Sbjct: 341 KDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERRRQEELEAQAEE 400

Query: 279 GGSKMAEKEKEEVEKEK 290
              K  EKEKE++ ++K
Sbjct: 401 AKRKRKEKEKEKLLRKK 417

[Close]
BLAST of Csa1G600080 vs. NCBI nr
Match: gi|700211272|gb|KGN66368.1| (hypothetical protein Csa_1G600080 [Cucumis sativus])

HSP 1 Score: 709.5 bits (1830), Expect = 2.9e-201
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 1 

Query: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK 60
           MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK
Sbjct: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLSVDTAFYPGTKTYLKIVPKSEDGIAK 60

Query: 61  QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI 120
           QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI
Sbjct: 61  QSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAPARIPKPGETSSI 120

Query: 121 GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI 180
           GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI
Sbjct: 121 GSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSI 180

Query: 181 DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG 240
           DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG
Sbjct: 181 DAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSG 240

Query: 241 QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM 300
           QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM
Sbjct: 241 QPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEM 300

Query: 301 GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL 356
           GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL
Sbjct: 301 GEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGILYLNLSKKGHVEEEL 355

[Close]
BLAST of Csa1G600080 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 190/370 (51.35%), Postives = 228/370 (61.62%), Query Frame = 1 

Query: 3   MDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLS---VDTAFYPGTKT-YLKIVPKSEDGI 62
           MDPSSSAKNFE+FEPRFDWV HPDSHVLVVHLS    +      T T  L++  + + G 
Sbjct: 1   MDPSSSAKNFEEFEPRFDWVHHPDSHVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLGN 60

Query: 63  AKQSINPKKYHAPRSVGANPPKSQNERPQSQA-SGKQIPT---------PPKPQGATGAP 122
            K     K+   P     +   ++ E         K++PT          PKP+  +  P
Sbjct: 61  GKWLRFEKEIDIPADADTDKISAKLEEGILYVKQPKKLPTTSSNIPPVQQPKPKAQSQPP 120

Query: 123 ARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEK 182
               KP  T+   + +P    ++ E+ E    A T  +  +       K  E  ++ A+ 
Sbjct: 121 PAATKP--TADPPTVRPSVPKSRNERAEPPKPAAT--EPTVAPPTVGPKAPESQNERADV 180

Query: 183 EKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASI 242
              +        + K +    +VG N PKSQNDRPQSQASGKQIPTPPKP+EATGAP   
Sbjct: 181 PSTDA----KKTNVKNYAPRPTVGPNAPKSQNDRPQSQASGKQIPTPPKPEEATGAP--- 240

Query: 243 PKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKT-----SEEGGSKMAEKEKE 302
                  SMGSGQP+EDLAK+DKTEEKGKAHTKLQDALEKT      EEGGSK AE++KE
Sbjct: 241 -------SMGSGQPVEDLAKKDKTEEKGKAHTKLQDALEKTREEGKEEEGGSKKAEEQKE 300

Query: 303 EV--EKEKRRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGIL 352
           EV  EK +RRRMKR  EEMGEESGRLRRRE YKQVIDGVVKE+RTNMVTLALGVAVF IL
Sbjct: 301 EVGEEKRRRRRMKRRNEEMGEESGRLRRREGYKQVIDGVVKEIRTNMVTLALGVAVFAIL 352

[Close]
BLAST of Csa1G600080 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 179/369 (48.51%), Postives = 224/369 (60.70%), Query Frame = 1 

Query: 3   MDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHLS---VDTAFYPGTKT-YLKIVPKSEDGI 62
           MDPSSSAK FE+FEPRFDWVDHPD+ VLVVHLS    +      T T  L++  + +   
Sbjct: 1   MDPSSSAKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKVQVTSTGKLRVSGERKLSS 60

Query: 63  AKQSINPKKYHAPRSVGANPPKS----------QNERPQSQASGKQIPTPPKPQGATGAP 122
            K     K+   P     +   +          Q ++P + +S       PKP+  +  P
Sbjct: 61  GKWLRFQKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATSSNIPPVQQPKPKAQSQPP 120

Query: 123 ARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEK 182
               KP  T+   + +P    ++ E+ E    A T+   A      +  E       ++ 
Sbjct: 121 PSATKP--TADPPTVRPNTPKSQNERPEPPKPAATETTVAPPTVGPNAPE-------SQN 180

Query: 183 EKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASI 242
           E+ ++   K ++             N   SQNDRPQSQASGKQIPTPPKP++ATGAPA I
Sbjct: 181 ERAQIPYIKTNV------------KNYAPSQNDRPQSQASGKQIPTPPKPEKATGAPARI 240

Query: 243 PKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKT-----SEEGGSKMAEKE-- 302
           PKP +TSSMGSGQP+EDL K++KTEEKGKAHTKL+DALEKT      EEG SKM EK+  
Sbjct: 241 PKPEKTSSMGSGQPVEDLGKKEKTEEKGKAHTKLRDALEKTREEGKEEEGESKMEEKDEK 300

Query: 303 -KEEV-EKEKRRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFG 349
            KEEV E+++RRR KR  EEMGEESGRLRRRE YKQVID VVKELRTNMVTLALG+A F 
Sbjct: 301 GKEEVGEEKRRRRRKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAFV 348

[Close]
BLAST of Csa1G600080 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 149/197 (75.63%), Postives = 160/197 (81.22%), Query Frame = 1 

Query: 168 KEKEEVGIAKPSIDAKK--FHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAP 227
           K  +E G   PSIDAKK  FH P++V  N PKSQNDRPQSQASGKQIPTP K QEATGAP
Sbjct: 164 KSGDETGTPYPSIDAKKMHFHFPQTVKPNAPKSQNDRPQSQASGKQIPTPLKLQEATGAP 223

Query: 228 ASIPKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKTSEEG-----GSKMAEK 287
           A     GETSS GSG P+EDLAK+DKTEEKGK+HTKL+DA EKT EEG     GSKMAEK
Sbjct: 224 AL----GETSSTGSGHPVEDLAKKDKTEEKGKSHTKLRDAQEKTREEGKEEEVGSKMAEK 283

Query: 288 EKEEVEKEK--RRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVF 347
           EKEEVE+EK  RRRMKR  EEMGEESGRLRRRE YKQVID VVKELRTNMVTLALG+A F
Sbjct: 284 EKEEVEEEKMRRRRMKRRSEEMGEESGRLRRREGYKQVIDVVVKELRTNMVTLALGIAAF 343

Query: 348 GILYLNLSKKGHVEEEL 356
            +LYLNLSK GH+EEEL
Sbjct: 344 VVLYLNLSKNGHMEEEL 356

[Close]
BLAST of Csa1G600080 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 100/140 (71.43%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 38  TAFYPGTKTYLKIVPKSED--GIAKQSINPKK--YHAPRSVGANPPKSQNERPQSQASGK 97
           TAFYP  KT LK  PKS D  G    SI+ KK  +H P++V  N PKSQN+RPQSQASGK
Sbjct: 149 TAFYPAIKTNLKNFPKSGDETGTPYPSIDAKKMHFHFPQTVKPNAPKSQNDRPQSQASGK 208

Query: 98  QIPTPPKPQGATGAPARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTR 157
           QIPTP K Q ATGAPA     GETSS GSG PVEDLAKK+KTEEKGK+HTKL+DA EKTR
Sbjct: 209 QIPTPLKLQEATGAPAL----GETSSTGSGHPVEDLAKKDKTEEKGKSHTKLRDAQEKTR 268

Query: 158 EDGKEEEGGSKMAEKEKEEV 174
           E+GKEEE GSKMAEKEKEEV
Sbjct: 269 EEGKEEEVGSKMAEKEKEEV 284


HSP 2 Score: 152.9 bits (385), Expect = 1.0e-33
Identity = 132/400 (33.00%), Postives = 172/400 (43.00%), Query Frame = 1 

Query: 1   MAMDPSSSAKNFEKFEPRFDWVDHPDSHVLVVHL--------------------SVDTAF 60
           MAM+PSSSAKNFE+FEPRFDWV HPDSHVLVVHL                    S D   
Sbjct: 1   MAMNPSSSAKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEVQVTSTGKLRVSGDRML 60

Query: 61  YPGTKTYL-------------KIVPKSEDGIAKQSINPKKYHAPRSVGANPPKSQNERPQ 120
             GT                 KI  K E GI      PKK   P +  +N P  Q  +P+
Sbjct: 61  SNGTWLRFEKEIDIPADADTDKISAKLEQGILYVK-QPKK---PSATSSNIPPVQQSKPK 120

Query: 121 SQASGKQIPTPPKPQGAT-----------GAPARIPKPGETSSIGSGQPVEDLAKKEKTE 180
            Q+      T P     T           G P       +T+     +  ++      + 
Sbjct: 121 VQSQHPPAATKPTADPPTVRPKAPNRRNEGLPTAFYPAIKTNLKNFPKSGDETGTPYPSI 180

Query: 181 EKGKAHTKLQDALEKTREDGKEEEGGSKMAEKEKEEVGIAKPSIDAKKFHVPRSVGA-NP 240
           +  K H      ++      + +   S+ + K+       + +  A       S G+ +P
Sbjct: 181 DAKKMHFHFPQTVKPNAPKSQNDRPQSQASGKQIPTPLKLQEATGAPALGETSSTGSGHP 240

Query: 241 PKSQNDRPQSQASGKQIPTPPKPQEATGAPASIPKPGETSSMGSGQPIEDLAKEDKTEEK 300
            +    + +++  GK        QE T       + G+   +GS   + +  KE+  EEK
Sbjct: 241 VEDLAKKDKTEEKGKSHTKLRDAQEKT------REEGKEEEVGS--KMAEKEKEEVEEEK 300

Query: 301 GKAHTKLQDALEKTSEEGGSKMAEKEKEEVEKEKRRRMKRMIEEMGEESGRLRRRERYKQ 356
            +                                 RRMKR  EEMGEESGRLRRRE YKQ
Sbjct: 301 MRR--------------------------------RRMKRRSEEMGEESGRLRRREGYKQ 356


HSP 3 Score: 252.7 bits (644), Expect = 9.7e-64
Identity = 165/310 (53.23%), Postives = 188/310 (60.65%), Query Frame = 1 

Query: 49  KIVPKSEDGIAKQSINPKKYHAPRSVGANPPKSQNERPQSQASGKQIPTPPKPQGATGAP 108
           KI  K E+GI      PKK     S   N P  Q  +P++Q+      T P     T  P
Sbjct: 80  KISAKLEEGILYVK-QPKKLPTTSS---NIPPVQQPKPKAQSQPPPAATKPTADPPTVRP 139

Query: 109 ARIPKPGETSSIGSGQPVEDLAKKEKTEEKGKAHTKLQDALEKTREDGKEEEGGSKMAEK 168
           + +PK                ++ E+ E    A T+   A             G K  E 
Sbjct: 140 S-VPK----------------SRNERAEPPKPAATEPTVAPPTV---------GPKAPES 199

Query: 169 EKEEVGIAKPSIDAKKFHVPRSVGANPPKSQNDRPQSQASGKQIPTPPKPQEATGAPASI 228
           + E   +  PS DAKK +V      N   SQNDRPQSQASGKQIPTPPKP+EATGAP   
Sbjct: 200 QNERADV--PSTDAKKTNVK-----NYAPSQNDRPQSQASGKQIPTPPKPEEATGAP--- 259

Query: 229 PKPGETSSMGSGQPIEDLAKEDKTEEKGKAHTKLQDALEKT-----SEEGGSKMAEKEKE 288
                  SMGSGQP+EDLAK+DKTEEKGKAHTKLQDALEKT      EEGGSK AE++KE
Sbjct: 260 -------SMGSGQPVEDLAKKDKTEEKGKAHTKLQDALEKTREEGKEEEGGSKKAEEQKE 319

Query: 289 EV--EKEKRRRMKRMIEEMGEESGRLRRRERYKQVIDGVVKELRTNMVTLALGVAVFGIL 348
           EV  EK +RRRMKR  EEMGEESGRLRRRE YKQVIDGVVKE+RTNMVTLALGVAVF IL
Sbjct: 320 EVGEEKRRRRRMKRRNEEMGEESGRLRRREGYKQVIDGVVKEIRTNMVTLALGVAVFAIL 342

Query: 349 YLNLSKKGHV 352
           YLNLS+ GH+
Sbjct: 380 YLNLSENGHI 342

The following BLAST results are available for this feature:
BLAST of Csa1G600080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX62_CUCSA2.0e-201100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600080 PE=4 SV=1[more]
A0A0A0M2E7_CUCSA2.3e-7248.51Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1[more]
A0A0A0LWW1_CUCSA7.0e-6975.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1[more]
A0A0A0LWW1_CUCSA1.2e-4171.43Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1[more]
A0A0A0LZR6_CUCSA1.1e-3272.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1[more]
BLAST of Csa1G600080 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76720.15.7e-0627.74 eukaryotic translation initiation factor 2 (eIF-2) family protein[more]
BLAST of Csa1G600080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211272|gb|KGN66368.1|2.9e-201100.00hypothetical protein Csa_1G600080 [Cucumis sativus][more]
gi|659100301|ref|XP_008451025.1|3.1e-7851.35PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X... [more]
gi|778665351|ref|XP_004144143.2|3.3e-7248.51PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus][more]
gi|700211274|gb|KGN66370.1|1.0e-6875.63hypothetical protein Csa_1G600100 [Cucumis sativus][more]
gi|700211274|gb|KGN66370.1|1.8e-4171.43hypothetical protein Csa_1G600100 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009086 methionine biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093130cucumber EST collection version 3.0transcribed_cluster
CU104488cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G600080.1Csa1G600080.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU104488CU104488transcribed_cluster
CU093130CU093130transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 275..295
scor