CU104488 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU104488
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 23086925 .. 23340284 (-)
Sequence length	731

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAAAAACCAAGAAGAAAACTCTGAAACAAAATTCTATGATTTTAAAAAGAAGTTGCAACCTAACTTTCGGGGCATGCTCTTGATAATATCCGATCACCGGGATCGATAATGCTGAGGCAGCATACTCTGTAGTATTCGCCACATGCGGTTCCAAGGTCAACATTGCTTCCGTTGTAATGGTGAACTCCAACCTTGGCCAACATTGCATAGTACTCAATCTCGGACTTTCGGAGAGGTAAACCTTCTCGCAGTGCTGCTTCATCAATCTGGATGACTGTAATACCAGCTTTCTCAAGATCCTCAACCTCGTCCTTGATTGCCAAGGCAATTTGGTAGCATGTTTCAAACCTTGGTTGGTCATTTCGAACAAAAGACCAGTTCAAAATTGTAACTGGACCAGTAAGCATTCCCTTCATAGGCCGCTTCGTCATGCTCTGAGCCATTGTCGACCAAAAGACGGTCATGGGTTTTGGACGACTGACATCACCATAGATGATAGGCGGCTTGACACAACGGGACCCATAGGATTGGACCCAACCATTGACAGTGAAGGCAAAGCCAGACAGTTGCTCTCCAAAGTACTCAACCATATCATTTCTCTCAGGACTCTCCATGCACCAAAACATCGATGTCAAGCTCTTCCTAGGAGCTGAACAACTTTGTTGATTTCCTCCTTGATGGAGCTGACATAGTCTTCCTCAGAGTATTTTTTCTTGCTTTGAATTCACGTC

Library


Library category	ESTs
fruit (8DPP) library	4
gynoecious flower library	2
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU104488 vs. Swiss-Prot
Match: METE_PLESU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Plectranthus scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-70
Identity = 133/162 (82.10%), Postives = 138/162 (85.19%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWST AQSMT
Sbjct: 490 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMT 549

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           +RPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 550 QRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 609

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE  +Y   A   VH +  +NV +      +  +C
Sbjct: 610 EGLPLRKSEHAFYLDWA---VHSFRITNVGVQDTTQIHTHMC 648

Query: 300  359
           
Sbjct: 670  648

Query: 360  419
           
Sbjct: 730  648

Query: 420  479
           
Sbjct: 790  648

Query: 480  539
           
Sbjct: 850  648

Query: 540  599
           
Sbjct: 910  648

Query: 600  606
           
Sbjct: 970  648

HSP 2 Score: 33.9 bits (76), Expect = 3.0e+00
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -2


Query: 647 KYSEEDYVSSIKEEINKVVQL 706
           + SEE+YV +IKEEINKVV+L
Sbjct: 456 RISEEEYVKAIKEEINKVVKL 476

Query: 707  710
           
Sbjct: 516  476

HSP 3 Score: 30.4 bits (67), Expect = 3.3e+01
Identity = 18/41 (43.90%), Postives = 23/41 (56.10%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           REFK  + +  + + A  + +  K+    EELDIDVLVHGE
Sbjct: 450 REFKPTRISEEEYVKA-IKEEINKVVKLQEELDIDVLVHGE 489

Query: 667  726
           
Sbjct: 510  489

Query: 727  730
           
Sbjct: 570  489

[Close]

BLAST of CU104488 vs. Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.0e-68
Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRP PMTVFWS  AQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSQTAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGI VIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRK+E  +Y   A   VH +  +N+ L      +  +C
Sbjct: 611 EGLPLRKAEHAFYLDWA---VHSFRITNLPLQDTTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

HSP 2 Score: 35.4 bits (80), Expect = 1.0e+00
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SE+DYV +IKEEI+KVV+L
Sbjct: 456 KKISEDDYVKAIKEEISKVVKL 477

Query: 707  713
           
Sbjct: 516  477

HSP 3 Score: 32.3 bits (72), Expect = 8.8e+00
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           RE+KA+K +    + A  + + +K+    EELDIDVLVHGE
Sbjct: 451 REYKAKKISEDDYVKA-IKEEISKVVKLQEELDIDVLVHGE 490

Query: 667  726
           
Sbjct: 511  490

Query: 727  730
           
Sbjct: 571  490

[Close]

BLAST of CU104488 vs. Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.5e-68
Identity = 128/162 (79.01%), Postives = 136/162 (83.95%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAF+ NGWVQSYGSRCVKPPIIYGDVSRP PMTVFWS+MAQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFSANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSSMAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
            RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIK+EVEDLEKAGI VIQIDEAALR
Sbjct: 551 ARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE ++Y    K  VH +  +NV +      +  +C
Sbjct: 611 EGLPLRKSEHDFY---LKWAVHSFRITNVGVQDTTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

HSP 2 Score: 35.0 bits (79), Expect = 1.4e+00
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SEE+YV +IKEEI+KVV+L
Sbjct: 456 KKISEEEYVKAIKEEISKVVKL 477

Query: 707  713
           
Sbjct: 516  477

HSP 3 Score: 33.9 bits (76), Expect = 3.0e+00
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           RE+KA+K +  + + A  + + +K+    EELDIDVLVHGE
Sbjct: 451 REYKAKKISEEEYVKA-IKEEISKVVKLQEELDIDVLVHGE 490

Query: 667  726
           
Sbjct: 511  490

Query: 727  730
           
Sbjct: 571  490

[Close]

BLAST of CU104488 vs. Swiss-Prot
Match: METE2_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 OS=Arabidopsis thaliana GN=MS2 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.9e-67
Identity = 127/162 (78.40%), Postives = 135/162 (83.33%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPP+IYGDVSRPKPMTVFWS+ AQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRK+E  +Y   A   VH +  +N  +  +   +  +C
Sbjct: 611 EGLPLRKAEHSFYLDWA---VHSFRITNCGVQDSTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

HSP 2 Score: 35.0 bits (79), Expect = 1.4e+00
Identity = 16/22 (72.73%), Postives = 16/22 (72.73%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SEEDYV +IKEEI KVV +
Sbjct: 456 KKISEEDYVKAIKEEIKKVVDI 477

Query: 707  713
           
Sbjct: 516  477

HSP 3 Score: 31.2 bits (69), Expect = 2.0e+01
Identity = 18/41 (43.90%), Postives = 24/41 (58.54%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           RE+KA+K +    + A  + +  K+    E+LDIDVLVHGE
Sbjct: 451 REYKAKKISEEDYVKA-IKEEIKKVVDIQEDLDIDVLVHGE 490

Query: 667  726
           
Sbjct: 511  490

Query: 727  730
           
Sbjct: 571  490

[Close]

BLAST of CU104488 vs. Swiss-Prot
Match: METE1_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 OS=Arabidopsis thaliana GN=MS1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-66
Identity = 127/162 (78.40%), Postives = 133/162 (82.10%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPP+IYGDVSRPK MTVFWS MAQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
            RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALR
Sbjct: 551 SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE  +Y   A   VH +  +N  +  +   +  +C
Sbjct: 611 EGLPLRKSEHAFYLDWA---VHSFRITNCGVQDSTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

HSP 2 Score: 35.8 bits (81), Expect = 8.0e-01
Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SEEDYV +IKEEI KVV L
Sbjct: 456 KKVSEEDYVKAIKEEIKKVVDL 477

Query: 707  713
           
Sbjct: 516  477

HSP 3 Score: 32.3 bits (72), Expect = 8.8e+00
Identity = 19/41 (46.34%), Postives = 24/41 (58.54%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           RE+KA+K +    + A  + +  K+    EELDIDVLVHGE
Sbjct: 451 REYKAKKVSEEDYVKA-IKEEIKKVVDLQEELDIDVLVHGE 490

Query: 667  726
           
Sbjct: 511  490

Query: 727  730
           
Sbjct: 571  490

[Close]

BLAST of CU104488 vs. TrEMBL
Match: A0A0A0LZR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599580 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.1e-69
Identity = 134/148 (90.54%), Postives = 137/148 (92.57%), Query Frame = -1


Query: 162 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 221
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT
Sbjct: 553 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 612

Query: 222 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 281
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 613 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 672

Query: 282 EGLPLRKSEIEYYAMLAKVGVHHYNGSN 341
           EGLPLRKSE  +Y   A   VH +  +N
Sbjct: 673 EGLPLRKSEENFYLNWA---VHSFRITN 697

Query: 342  401
           
Sbjct: 733  697

Query: 402  461
           
Sbjct: 793  697

Query: 462  521
           
Sbjct: 853  697

Query: 522  581
           
Sbjct: 913  697

Query: 582  606
           
Sbjct: 973  697

[Close]

BLAST of CU104488 vs. TrEMBL
Match: A0A0A0LZR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599580 PE=3 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 7.2e-01
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SEEDYVSSIKEEINKVVQL
Sbjct: 518 KKISEEDYVSSIKEEINKVVQL 539

Query: 707  713
           
Sbjct: 578  539

HSP 2 Score: 34.3 bits (77), Expect = 2.6e+02
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           REFKA+K +    +S+  + +  K+    EELDIDVLVHGE
Sbjct: 513 REFKAKKISEEDYVSS-IKEEINKVVQLQEELDIDVLVHGE 552

Query: 667  726
           
Sbjct: 573  552

Query: 727  730
           
Sbjct: 633  552

HSP 3 Score: 267.7 bits (683), Expect = 1.4e-68
Identity = 133/162 (82.10%), Postives = 141/162 (87.04%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+MAQSMT
Sbjct: 590 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMT 649

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 650 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 709

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE ++Y    K  VH +  +N  +      +  +C
Sbjct: 710 EGLPLRKSEQDFY---LKWAVHSFRITNCGVQDTTQVHTHMC 748

Query: 300  359
           
Sbjct: 770  748

Query: 360  419
           
Sbjct: 830  748

Query: 420  479
           
Sbjct: 890  748

Query: 480  539
           
Sbjct: 950  748

Query: 540  599
           
Sbjct: 1010  748

Query: 600  606
           
Sbjct: 1070  748

[Close]

BLAST of CU104488 vs. TrEMBL
Match: V4W1E0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014233mg PE=3 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 9.8e+02
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = -2


Query: 647 KYSEEDYVSSIKEEINKVVQL 706
           + SE+DYV +IKEEIN VV+L
Sbjct: 556 RISEDDYVKTIKEEINNVVKL 576

Query: 707  710
           
Sbjct: 616  576

HSP 2 Score: 267.7 bits (683), Expect = 1.4e-68
Identity = 133/162 (82.10%), Postives = 141/162 (87.04%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+MAQSMT
Sbjct: 519 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMT 578

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 579 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 638

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE ++Y    K  VH +  +N  +      +  +C
Sbjct: 639 EGLPLRKSEQDFY---LKWAVHSFRITNCGVQDTTQVHTHMC 677

Query: 300  359
           
Sbjct: 699  677

Query: 360  419
           
Sbjct: 759  677

Query: 420  479
           
Sbjct: 819  677

Query: 480  539
           
Sbjct: 879  677

Query: 540  599
           
Sbjct: 939  677

Query: 600  606
           
Sbjct: 999  677

[Close]

BLAST of CU104488 vs. TrEMBL
Match: A0A067FJL8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003819mg PE=3 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 9.8e+02
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = -2


Query: 647 KYSEEDYVSSIKEEINKVVQL 706
           + SE+DYV +IKEEIN VV+L
Sbjct: 485 RISEDDYVKTIKEEINNVVKL 505

Query: 707  710
           
Sbjct: 545  505

HSP 2 Score: 267.7 bits (683), Expect = 1.4e-68
Identity = 134/162 (82.72%), Postives = 140/162 (86.42%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWST AQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE  +Y   A   VH +  +NV +      +  +C
Sbjct: 611 EGLPLRKSEHAFYLDWA---VHSFRITNVGVEDTTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

[Close]

BLAST of CU104488 vs. TrEMBL
Match: B2VQE0_PHERA (Methionine synthase OS=Phelipanche ramosa GN=met1 PE=2 SV=1)

HSP 1 Score: 36.6 bits (83), Expect = 5.2e+01
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = -2


Query: 647 KKYSEEDYVSSIKEEINKVVQL 706
           KK SEE+Y+ +IKEEINKVV+L
Sbjct: 456 KKISEEEYIKAIKEEINKVVKL 477

Query: 707  713
           
Sbjct: 516  477

HSP 2 Score: 33.5 bits (75), Expect = 4.4e+02
Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = -3


Query: 607 REFKARKNTLRKTMSAPSRRKSTKLFSS*EELDIDVLVHGE 666
           RE+KA+K +  + + A  + +  K+    EELDIDVLVHGE
Sbjct: 451 REYKAKKISEEEYIKA-IKEEINKVVKLQEELDIDVLVHGE 490

Query: 667  726
           
Sbjct: 511  490

Query: 727  730
           
Sbjct: 571  490

HSP 3 Score: 267.7 bits (683), Expect = 1.4e-68
Identity = 133/162 (82.10%), Postives = 141/162 (87.04%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+MAQSMT
Sbjct: 562 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMT 621

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 622 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 681

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE ++Y    K  VH +  +N  +      +  +C
Sbjct: 682 EGLPLRKSEQDFY---LKWAVHSFRITNCGVQDTTQVHTHMC 720

Query: 300  359
           
Sbjct: 742  720

Query: 360  419
           
Sbjct: 802  720

Query: 420  479
           
Sbjct: 862  720

Query: 480  539
           
Sbjct: 922  720

Query: 540  599
           
Sbjct: 982  720

Query: 600  606
           
Sbjct: 1042  720

[Close]

BLAST of CU104488 vs. NCBI nr
Match: gi|449452654|ref|XP_004144074.1| (PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 4.7e-70
Identity = 134/148 (90.54%), Postives = 137/148 (92.57%), Query Frame = -1


Query: 162 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 221
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT
Sbjct: 553 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 612

Query: 222 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 281
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 613 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 672

Query: 282 EGLPLRKSEIEYYAMLAKVGVHHYNGSN 341
           EGLPLRKSE  +Y   A   VH +  +N
Sbjct: 673 EGLPLRKSEENFYLNWA---VHSFRITN 697

Query: 342  401
           
Sbjct: 733  697

Query: 402  461
           
Sbjct: 793  697

Query: 462  521
           
Sbjct: 853  697

Query: 522  581
           
Sbjct: 913  697

Query: 582  606
           
Sbjct: 973  697

[Close]

BLAST of CU104488 vs. NCBI nr
Match: gi|659100299|ref|XP_008451024.1| (PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 4.7e-70
Identity = 134/148 (90.54%), Postives = 137/148 (92.57%), Query Frame = -1


Query: 162 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 221
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT
Sbjct: 555 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 614

Query: 222 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 281
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 615 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 674

Query: 282 EGLPLRKSEIEYYAMLAKVGVHHYNGSN 341
           EGLPLRKSE  +Y   A   VH +  +N
Sbjct: 675 EGLPLRKSEENFYLNWA---VHSFRITN 699

Query: 342  401
           
Sbjct: 735  699

Query: 402  461
           
Sbjct: 795  699

Query: 462  521
           
Sbjct: 855  699

Query: 522  581
           
Sbjct: 915  699

Query: 582  606
           
Sbjct: 975  699

[Close]

BLAST of CU104488 vs. NCBI nr
Match: gi|697123273|ref|XP_009615630.1| (PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Nicotiana tomentosiformis])

HSP 1 Score: 272.3 bits (695), Expect = 8.1e-70
Identity = 133/162 (82.10%), Postives = 142/162 (87.65%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWS++AQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSIAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRK+E  +Y   A   VH +  +NVD+      +  +C
Sbjct: 611 EGLPLRKAEHAFYLNWA---VHSFRITNVDIQDTTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

[Close]

BLAST of CU104488 vs. NCBI nr
Match: gi|641847429|gb|KDO66309.1| (hypothetical protein CISIN_1g003819mg [Citrus sinensis])

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 133/162 (82.10%), Postives = 141/162 (87.04%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+MAQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE ++Y    K  VH +  +N  +      +  +C
Sbjct: 611 EGLPLRKSEQDFY---LKWAVHSFRITNCGVQDTTQVHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

[Close]

BLAST of CU104488 vs. NCBI nr
Match: gi|113473614|gb|ABI35986.1| (methionine synthase [Phelipanche ramosa])

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 134/162 (82.72%), Postives = 140/162 (86.42%), Query Frame = -1


Query: 120 PERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTMAQSMT 179
           PERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWST AQSMT
Sbjct: 491 PERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMT 550

Query: 180 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 239
           KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR
Sbjct: 551 KRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALR 610

Query: 240 EGLPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGEYYRVC 299
           EGLPLRKSE  +Y   A   VH +  +NV +      +  +C
Sbjct: 611 EGLPLRKSEHAFYLDWA---VHSFRITNVGVEDTTQIHTHMC 649

Query: 300  359
           
Sbjct: 671  649

Query: 360  419
           
Sbjct: 731  649

Query: 420  479
           
Sbjct: 791  649

Query: 480  539
           
Sbjct: 851  649

Query: 540  599
           
Sbjct: 911  649

Query: 600  606
           
Sbjct: 971  649

The following BLAST results are available for this feature:

BLAST of CU104488 vs. Swiss-Prot


Match Name	E-value	Identity	Description
METE_PLESU	3.6e-70	82.10	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Plectra...	[more]
METE_CATRO	2.0e-68	80.25	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cathara...	[more]
METE_MESCR	7.5e-68	79.01	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembr...	[more]
METE2_ARATH	2.9e-67	78.40	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 OS=Arabi...	[more]
METE1_ARATH	1.4e-66	78.40	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 OS=Arabi...	[more]

BLAST of CU104488 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZR2_CUCSA	2.1e-69	90.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599580 PE=3 SV=1	[more]
A0A0A0LZR2_CUCSA	7.2e-01	95.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599580 PE=3 SV=1	[more]
V4W1E0_9ROSI	9.8e+02	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014233mg PE=3 SV=1	[more]
A0A067FJL8_CITSI	9.8e+02	66.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003819mg PE=3 SV=1	[more]
B2VQE0_PHERA	5.2e+01	72.73	Methionine synthase OS=Phelipanche ramosa GN=met1 PE=2 SV=1	[more]

BLAST of CU104488 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452654\|ref\|XP_004144074.1\|	4.7e-70	90.54	PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase...	[more]
gi\|659100299\|ref\|XP_008451024.1\|	4.7e-70	90.54	PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase...	[more]
gi\|697123273\|ref\|XP_009615630.1\|	8.1e-70	82.10	PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase...	[more]
gi\|641847429\|gb\|KDO66309.1\|	2.3e-69	82.10	hypothetical protein CISIN_1g003819mg [Citrus sinensis]	[more]
gi\|113473614\|gb\|ABI35986.1\|	2.3e-69	82.72	methionine synthase [Phelipanche ramosa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002629	Met_Synth_C/arc
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45

Vocabulary: **Molecular Function**
Term	Definition
GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009086	methionine biosynthetic process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009086	methionine biosynthetic process
molecular_function	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G600930	Csa1G600930	gene
Csa1G600850	Csa1G600850	gene
Csa1G600790	Csa1G600790	gene
Csa1G600970	Csa1G600970	gene
Csa1G600230	Csa1G600230	gene
Csa1G600810	Csa1G600810	gene
Csa1G600870	Csa1G600870	gene
Csa1G600210	Csa1G600210	gene
Csa1G600950	Csa1G600950	gene
Csa1G600180	Csa1G600180	gene
Csa1G600760	Csa1G600760	gene
Csa1G600780	Csa1G600780	gene
Csa1G600130	Csa1G600130	gene
Csa1G600770	Csa1G600770	gene
Csa1G600250	Csa1G600250	gene
Csa1G600200	Csa1G600200	gene
Csa1G600160	Csa1G600160	gene
Csa1G600920	Csa1G600920	gene
Csa1G600220	Csa1G600220	gene
Csa1G600820	Csa1G600820	gene
Csa1G600080	Csa1G600080	gene
Csa1G600170	Csa1G600170	gene
Csa1G600140	Csa1G600140	gene
Csa1G600910	Csa1G600910	gene
Csa1G600150	Csa1G600150	gene
Csa1G600830	Csa1G600830	gene
Csa1G600190	Csa1G600190	gene
Csa1G600260	Csa1G600260	gene
Csa1G600840	Csa1G600840	gene
Csa1G600890	Csa1G600890	gene
Csa1G600110	Csa1G600110	gene
Csa1G599580	Csa1G599580	gene
Csa1G600860	Csa1G600860	gene
Csa1G600980	Csa1G600980	gene
Csa1G600240	Csa1G600240	gene
Csa1G600120	Csa1G600120	gene
Csa1G600100	Csa1G600100	gene
Csa1G600880	Csa1G600880	gene
Csa1G600090	Csa1G600090	gene
Csa1G600900	Csa1G600900	gene
Csa1G600940	Csa1G600940	gene
Csa1G600960	Csa1G600960	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02K5H9D	FKNP3UI02K5H9D	EST
FKNP3UI02KGVCO	FKNP3UI02KGVCO	EST
FKNP3UI02KLEW9	FKNP3UI02KLEW9	EST
FKNP3UI02MKPLZ	FKNP3UI02MKPLZ	EST
G0138402	G0138402	EST
G0211899	G0211899	EST
H0011191	H0011191	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002629	Cobalamin-independent methionine synthase MetE, C-terminal/archaeal	PFAM	PF01717	Meth_synt_2	coord: 4..175 score: 8.0
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 167..213 score: 5.
None	No IPR available	GENE3D	G3DSA:3.20.20.210		coord: 5..172 score: 1.4
None	No IPR available	PANTHER	PTHR30519	5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE	coord: 5..179 score: 4.1E
None	No IPR available	PANTHER	PTHR30519:SF0	5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE	coord: 5..179 score: 4.1E
None	No IPR available	unknown	SSF51726	UROD/MetE-like	coord: 6..186 score: 5.1