Csa1G600140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G600140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPheophorbide a oxygenase; contains IPR017941 (Rieske [2Fe-2S] iron-sulphur domain)
LocationChr1 : 23113104 .. 23115683 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTTCTCAAACTCTCTTCTTCTCCACTTCATTTCACTTCCAAATTCAACAAACCCCAATTTCCTAATCAATGTTTGCAGATTCCTCTCTTCCCCTCATCATCTTCTTCCTCCATCAACAGACGCAATCCAATATTCAATCTCTGTGCCATCACATCATCCACCATTTCAACCCAAGAATCCGCCAACCCGTTTCAGGTGGACGCCGAGAGTGAACCGGGAGAGGAGAGATTTGATTGGTATGCACAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTGGTTGTGTGGTGGGATAAGAATGAGAGTGCATGGAAGGTGTTTGATGATTTGTGTCCACATAGATTAGCTCCGTTGTCCGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCTCCCGACGGTCCTCCGGTAATGAACCGATTCTAACCGTTTTTCTCGTGTGAAATGACGTTTATTTTATGTCTTTGTTGTTTAATGTTTTGGTTAAATTAGAGATTGAACTTTATGGTTGTTTCATCCTATCAGTGAAATTATTCATATGTTTCTCATAAAAAAAAAAAAGCTTTGTGTTTGTTTCTGTATAATGTTGAACTTTTATAGAGTTGTAATTAATCTTTGAATTTGGATTTCGTCTCTGATGATGACCTGACATGACAAATGGTCCATTGGACTAACATTAGTTGACATAATTGATTGATACATGCAAAAGAGATGTCATATGCTGTTTGCTGCCACTTAATTTTGTTCAGTTTAGATTTAGTTAACAACGTTAGTGTTAATGGTAGAGATTTCATGAGTTTTGACACTTCAAAGTTTGGAAAGTTTCTACAGTATGATATAACACTTTAAAACAACATTACTGAATCTTCTCATCTCATCGTATTTTATATCTTTATAACATAGTTCCACAATGCTTCGGAGAGCTGTGCTTACTAAGAATCATCACTTTTCATTTCTTTAAATGACAATTCAGAAGAATATAATTTTTCTCAATGGATCTATTTTATATTGATATTACTGTAATCAAACTTTTTTTGTTTACTTTTTTTAATGTTGCAAGTTGTACGCCTAATGACCCCTAGACTATCTATGTGTTCGTAAGGACTAAATTAATAAGCTTAACTTGGAAATGTCATCATATGTCTCAAGATTGTTAATAATTTTCATTTCTACTCTATGATGAACTTGTCGGGAAAACTTTTGAAAAACATACTAATGATTAGATTTCAGAATTGAATTTTACTATTTGTTTCTTTCAGTGGATATTATTCTACTGGTGAATATTGTTTCTGAATCTGATGGCACATTACGATTGGAAGTGCCGTTGTATTCTTAAGTTACCTAGATAGTCAAATTTTAAGATTGTTAAGGTTTCGTTTGGTAACCATTTTGTGTTTGAAAGTTAAGCCTATTTCATCCCTATTTTGCTCGATGATTTGCACCCTTCTCAACTGCAATGGTTGAATTCTTTTCCAAATTCCAAATTCCAAAAACAAACATTTGAAAGCTATTTTTTTAGTTTTCAAACTTTGGCCTAGTTTTTTAAACTATTGGTAAAAAGTAGATAGCAAAGGAAGAAAGTTTAAGGTGGAAGCAGTGTTTATAGACTTTCATTTTCAGAAACATAAACAAAAAACAAGATGGTGACTAAATGGTGCCTAAAAGATTTGGTATTATCGTTATATTGGCCTATTTTTAATATTTGACATTTGGACAAGGTTTGCAGTTTTTCTTTTGGTGATATGTTGCAGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTTTCCTAGTATCGTGCAGAATGATGTGTTATGGTTTTGGCCAAATAGTGATCCTCAGTACAAAGATATTATGGAGAAGAAAAAACCCCCATACATCCCTGAACTGGATGATCCATCATTTACCAAGTTAATCAGTAACAGAGATCTTCCGTATGGGTATGGAGTGATAAATTGTCACTATGTAGTTTTCTGCATTCTATTTAATCTTAGTTAGTCTAGTCGTAGAGGAATATGAAGGAAGTTCTGTTATATGTGGATGAATTTGGTGTGGAAATGTGTGGATCCAACTGGCGTAGGAAAAATGTGCTCTTTATTTCTTTTCTTTTCTATTTCCACCAAAAGAAAATTGATGGTAAGCTGAAGATATTTATCAGAAAGATCACGATCTTATTCTTCCAAGAAGGGTCTAAAATGGTCAGCTACATAACTAATCTTCTCAGTTAAATATTGTTTCTGTTCGGTGGATCTCATTGTAAAAGACAAACCAAAGAAGTTAAACTGTATTAGTTAACAATAAGATTGATGTATTGACAGGAGATCTATTGCATAGAGACGACCTCTCTATTTACTCAACTACTCAGTCTTTTTGCACTTTCAGGTATGAGATTTTGACTGAGAACCTTATGGACCCAGCACATGTCCCATACGCTCATTATGGGATAATGGGAAGACTACCCAAAAACAGATGA

mRNA sequence

ATGGACGTTCTCAAACTCTCTTCTTCTCCACTTCATTTCACTTCCAAATTCAACAAACCCCAATTTCCTAATCAATGTTTGCAGATTCCTCTCTTCCCCTCATCATCTTCTTCCTCCATCAACAGACGCAATCCAATATTCAATCTCTGTGCCATCACATCATCCACCATTTCAACCCAAGAATCCGCCAACCCGTTTCAGGTGGACGCCGAGAGTGAACCGGGAGAGGAGAGATTTGATTGGTATGCACAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTGGTTGTGTGGTGGGATAAGAATGAGAGTGCATGGAAGGTGTTTGATGATTTGTGTCCACATAGATTAGCTCCGTTGTCCGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCTCCCGACGGTCCTCCGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTTTCCTAGTATCGTGCAGAATGATGTGTTATGGTTTTGGCCAAATAGTGATCCTCAGTACAAAGATATTATGGAGAAGAAAAAACCCCCATACATCCCTGAACTGGATGATCCATCATTTACCAAGTTAATCAGTAACAGAGATCTTCCGTATGGGTATGAGATTTTGACTGAGAACCTTATGGACCCAGCACATGTCCCATACGCTCATTATGGGATAATGGGAAGACTACCCAAAAACAGATGA

Coding sequence (CDS)

ATGGACGTTCTCAAACTCTCTTCTTCTCCACTTCATTTCACTTCCAAATTCAACAAACCCCAATTTCCTAATCAATGTTTGCAGATTCCTCTCTTCCCCTCATCATCTTCTTCCTCCATCAACAGACGCAATCCAATATTCAATCTCTGTGCCATCACATCATCCACCATTTCAACCCAAGAATCCGCCAACCCGTTTCAGGTGGACGCCGAGAGTGAACCGGGAGAGGAGAGATTTGATTGGTATGCACAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTGGTTGTGTGGTGGGATAAGAATGAGAGTGCATGGAAGGTGTTTGATGATTTGTGTCCACATAGATTAGCTCCGTTGTCCGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCTCCCGACGGTCCTCCGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTTTCCTAGTATCGTGCAGAATGATGTGTTATGGTTTTGGCCAAATAGTGATCCTCAGTACAAAGATATTATGGAGAAGAAAAAACCCCCATACATCCCTGAACTGGATGATCCATCATTTACCAAGTTAATCAGTAACAGAGATCTTCCGTATGGGTATGAGATTTTGACTGAGAACCTTATGGACCCAGCACATGTCCCATACGCTCATTATGGGATAATGGGAAGACTACCCAAAAACAGATGA

Protein sequence

MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIMGRLPKNR*
Homology
[Close]
BLAST of Csa1G600140 vs. Swiss-Prot
Match: PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.6e-103
Identity = 168/246 (68.29%), Postives = 197/246 (80.08%), Query Frame = 1 

Query: 19  KPQFPNQC-LQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQESAN-PFQVDAESEPGE 78
           KP+F  +C    P  P S +S I R++  F     +  + S   S N P + +A  EPG 
Sbjct: 19  KPRF--RCSFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGS 78

Query: 79  ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSE 138
           ++FDWYA WYP+MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV DD CPHRLAPLS+
Sbjct: 79  DKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSD 138

Query: 139 GRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFW 198
           GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAV+PS VQ++++WFW
Sbjct: 139 GRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFW 198

Query: 199 PNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGI 258
           PNSDP+YK+I+E  KPPYIPEL+DPSFTKL+ NRD+PYGY++L ENLMDPAHVPYAHYG+
Sbjct: 199 PNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGL 258

Query: 259 MGRLPK 263
           M R PK
Sbjct: 259 M-RFPK 261

[Close]
BLAST of Csa1G600140 vs. Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.5e-48
Identity = 109/270 (40.37%), Postives = 148/270 (54.81%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFT-SKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFN--LCAITSSTI 60
           M V+ LSS+    T S+  K  F +   + PL  S S S    R+ +F+  L      ++
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS----RSKLFHNPLRVAAPPSV 60

Query: 61  STQESANPFQVDAE-----SEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
            T +S    +++ E      E G E F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  PTSDSTEEKRIEEEYGGDKEEEGSE-FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  FDDLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIP-ELDDPSFTKLISN 240
                S RAC   FP++V   +L+ WP  D    D     +PP +P + D P F+ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYEILTENLMDPAHVPYAHYGIMGR 260
           RDL YGY+ L EN+ DP+H+ +AH+ + GR
Sbjct: 241 RDLFYGYDTLMENVSDPSHIDFAHHKVTGR 263

[Close]
BLAST of Csa1G600140 vs. Swiss-Prot
Match: TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.4e-29
Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 1 

Query: 8   SSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ-ESANPF 67
           +SP+ FT     P   N      + P+     + RR+      A+  + +S Q E     
Sbjct: 15  TSPILFTKVTPTPIIHNHRSTCTI-PTKPRLRLLRRS------AVAGTAVSDQTEGGGDV 74

Query: 68  QVDAESEPGEE--RFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFD 127
            ++ E E   E   +DW  +WYP+    ++ +  P G TV    +V++ D  E   + ++
Sbjct: 75  LLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYE 134

Query: 128 DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVF 187
           D CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K ACV  +
Sbjct: 135 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPASAK---IPKAACVKTY 194

Query: 188 PSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLM 247
                  V+W W ++    K     +K P+      P F  + +  +LPY + IL ENLM
Sbjct: 195 EVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLM 247

Query: 248 DPAHVPYAH 254
           DPAHVP +H
Sbjct: 255 DPAHVPISH 247

[Close]
BLAST of Csa1G600140 vs. Swiss-Prot
Match: TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-29
Identity = 73/185 (39.46%), Postives = 97/185 (52.43%), Query Frame = 1 

Query: 79  FDWYAQWYPIMPICDLDKRVPH----GKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPL 138
           +DW  +WYP+     L K VPH    G  V   ++V++ D N+  ++ ++D CPHRLA L
Sbjct: 97  YDWTEEWYPLY----LTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-FQCYEDRCPHRLAKL 156

Query: 139 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLW 198
           SEG++   GRL+C+YHGW F G G C  IPQ P D       K ACV  +       VLW
Sbjct: 157 SEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAK---IPKSACVKTYEVRDSQGVLW 216

Query: 199 FWPNSDPQYKDIMEKKKPPYIPELD------DPSFTKLISNRDLPYGYEILTENLMDPAH 254
            W          M +K PP + ++        P F  + +  +LPY + IL ENLMDPAH
Sbjct: 217 VW----------MSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAH 262

[Close]
BLAST of Csa1G600140 vs. Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-14
Identity = 57/181 (31.49%), Postives = 79/181 (43.65%), Query Frame = 1 

Query: 85  WYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGR 144
           WYP      L+  +     + G+  V++ D++ SA     D C HR  PLS G++   G 
Sbjct: 134 WYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEH-SAPTCIKDSCAHRACPLSLGKVIN-GH 193

Query: 145 LQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC----VAVFPSIVQNDVLWFWPNSD 204
           +QC YHGW F+GSG C  +P           S R C    VA  P + ++  +W WP   
Sbjct: 194 VQCPYHGWEFDGSGACTKMP-----------STRMCHGVGVAALPCVEKDGFVWVWPGDG 253

Query: 205 PQYKDIMEKKKPPYIPELDDPSFTKLISNR--------DLPYGYEILTENLMDPAHVPYA 254
           P          PP +P    P FT   +          D+P  + +L ENL+D AH P+ 
Sbjct: 254 P----------PPDLP----PDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFT 287

[Close]
BLAST of Csa1G600140 vs. TrEMBL
Match: M5W8K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004005mg PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-108
Identity = 181/261 (69.35%), Postives = 213/261 (81.61%), Query Frame = 1 

Query: 1   MDVLKLSSSP-LHFTSKFNKPQ---FPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSST 60
           M+ LK+SS P L   SKF+K Q     + C      PSSS S + R    F +   TSS+
Sbjct: 1   MEALKISSIPSLQIPSKFDKAQSKKLTSFCFNS--IPSSSFSLVQRNISTFKIFTTTSSS 60

Query: 61  ISTQESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           +ST E ANP +++ E+   +E+FDWYAQWYP+MP+CDLDKRVPH K V+GIDVVVWWD+N
Sbjct: 61  VST-EPANPPELEVENRTQQEKFDWYAQWYPLMPVCDLDKRVPHAKKVLGIDVVVWWDRN 120

Query: 121 ESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180
           ESAWKVFDD CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPP+HTS
Sbjct: 121 ESAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPIHTS 180

Query: 181 KRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGY 240
           K+ACVA +PS VQN ++WFWPNSDPQYKD++ +KKPPYIPELDDPS++ L+ NR++PYGY
Sbjct: 181 KKACVAAYPSTVQNGIVWFWPNSDPQYKDVLAEKKPPYIPELDDPSYSGLMGNREIPYGY 240

Query: 241 EILTENLMDPAHVPYAHYGIM 258
           E+L ENLMDPAHVPYAHYGIM
Sbjct: 241 EVLIENLMDPAHVPYAHYGIM 258

[Close]
BLAST of Csa1G600140 vs. TrEMBL
Match: A0A0D2P555_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G016400 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.3e-106
Identity = 178/266 (66.92%), Postives = 212/266 (79.70%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFT---------SKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCA 60
           MDVLK S + ++           ++F+KP F N  LQ+P F  + S S      +F    
Sbjct: 1   MDVLKASPTIVYSPYIPTTTRNKTQFSKPIFHNLNLQLPCFTRNGSKS-----RLFT--T 60

Query: 61  ITSSTISTQESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVV 120
           ++SS IST ES  P   + E+E G+ERFDWY+QWYP+MP+CDLDKRVPHGK V+G+D+VV
Sbjct: 61  LSSSPISTTESIEPPMPEVEAEVGKERFDWYSQWYPVMPVCDLDKRVPHGKKVLGLDLVV 120

Query: 121 WWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGP 180
           WWDKNE+ WKVFDD CPHRLAPLSEGRIDQWGRLQCVYHGWCF G+GDCK IPQAP DGP
Sbjct: 121 WWDKNENEWKVFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFGGNGDCKIIPQAPLDGP 180

Query: 181 PVHTSKRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRD 240
           PVHT K+ACVAV+PS+VQ+D++W WPN+DPQYKDI+ KKKPPYIP LDDPSF+KL+ NRD
Sbjct: 181 PVHTFKKACVAVYPSVVQHDIVWVWPNADPQYKDIITKKKPPYIPVLDDPSFSKLMGNRD 240

Query: 241 LPYGYEILTENLMDPAHVPYAHYGIM 258
           +PYGYE+L ENLMDPAHVPYAHYGIM
Sbjct: 241 IPYGYEVLVENLMDPAHVPYAHYGIM 259

[Close]
BLAST of Csa1G600140 vs. TrEMBL
Match: A0A0B0NPL7_GOSAR (Protochlorophyllide-dependent translocon component 52, chloroplastic-like protein OS=Gossypium arboreum GN=F383_23014 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-105
Identity = 176/266 (66.17%), Postives = 211/266 (79.32%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFT---------SKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCA 60
           MDVLK S + +H           ++F KP F N  LQ+P +  + S S      +F    
Sbjct: 1   MDVLKASPTIVHSPYIPTTTRNKTQFAKPIFHNLNLQLPCYTRNGSKS-----RLFT--T 60

Query: 61  ITSSTISTQESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVV 120
           ++SS IST ES  P   + E+E G+ERFDWY+QWYP+MP+CDLDKRVPHGK V+G+D+VV
Sbjct: 61  LSSSPISTTESIEPPMPEVEAEVGKERFDWYSQWYPVMPVCDLDKRVPHGKKVLGLDLVV 120

Query: 121 WWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGP 180
           WWDKNE+ WKVFDD CPHRLAPLSEGRIDQWGRLQCVYHGWCF G+GDCK IPQAP DGP
Sbjct: 121 WWDKNENEWKVFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFGGNGDCKIIPQAPVDGP 180

Query: 181 PVHTSKRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRD 240
           PVHT K+ACVAV+PS+VQ+D++W WPN+DPQY+DI+ KKKPPYIP LDDPSF+KL+ NRD
Sbjct: 181 PVHTFKKACVAVYPSVVQHDIVWVWPNADPQYRDIITKKKPPYIPVLDDPSFSKLMGNRD 240

Query: 241 LPYGYEILTENLMDPAHVPYAHYGIM 258
           +PYGYE+L ENLMDPAHVPYAHYG+M
Sbjct: 241 IPYGYEVLVENLMDPAHVPYAHYGLM 259

[Close]
BLAST of Csa1G600140 vs. TrEMBL
Match: A0A067L4E1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01891 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-104
Identity = 173/253 (68.38%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 15  SKFNKPQFPNQCLQIPLFPSSSSSSIN---RRNPIFNLCAITSSTISTQESANPFQVDAE 74
           +KF KP+F N   Q    P+SS S I+    ++ +F    ++S +  + ES  P + + E
Sbjct: 21  TKFAKPKFLN--FQFNTLPASSFSRIHYNPSKSKLFT--TVSSPSFVSTESIEPPEPELE 80

Query: 75  SEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRL 134
           ++  E++FDWY+QWYPIMP+CDLDKRVPH K V+GIDVVVWWD+NE+AWKVFDD CPHRL
Sbjct: 81  TDTHEDKFDWYSQWYPIMPVCDLDKRVPHAKKVLGIDVVVWWDRNENAWKVFDDSCPHRL 140

Query: 135 APLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQND 194
           APLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH SKRACVAV+PS + +D
Sbjct: 141 APLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHASKRACVAVYPSTLHHD 200

Query: 195 VLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPY 254
           ++WFWPN+DPQYKD++ KKKPP IPEL+DPSFTKL+ NRD+PYGY++L ENLMDPAHVPY
Sbjct: 201 IVWFWPNTDPQYKDVIMKKKPPSIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPY 260

Query: 255 AHYGIMGRLPKNR 265
           AHYGIM R+ KN+
Sbjct: 261 AHYGIM-RMRKNK 268

[Close]
BLAST of Csa1G600140 vs. TrEMBL
Match: W9SBE7_9ROSA (Protochlorophyllide-dependent translocon component 52 OS=Morus notabilis GN=L484_019086 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-102
Identity = 180/267 (67.42%), Postives = 210/267 (78.65%), Query Frame = 1 

Query: 6   LSSSPLH---FTSKF-NKPQFPNQCLQI--PLFPSSSSSSINR-RNPI-FNLCAITSSTI 65
           L +SP+H     S+  NK QF         P  P+SS  S +R RNP  F L    SS++
Sbjct: 4   LRTSPVHSLGLPSRLDNKTQFRKLISSNVNPFLPTSSFCSDHRQRNPSRFELFTTISSSV 63

Query: 66  STQESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 125
           ST  S +P Q +  +E    +FDWY+QWYP+MP+CDLDKRVPHGK V+G+DVVVWWD+NE
Sbjct: 64  STDLS-DPPQPEVRTETPGGKFDWYSQWYPVMPVCDLDKRVPHGKKVIGLDVVVWWDRNE 123

Query: 126 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 185
           S WKVFDD CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDC FIPQAPPDGPPVHT K
Sbjct: 124 SDWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCNFIPQAPPDGPPVHTFK 183

Query: 186 RACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYE 245
           +AC A++PS VQN ++WFWPN+DPQYKDI+ KKKPPYI E+DDPSFTKL+ NRD+PYGYE
Sbjct: 184 KACAAIYPSTVQNGIVWFWPNTDPQYKDILMKKKPPYISEIDDPSFTKLMGNRDIPYGYE 243

Query: 246 ILTENLMDPAHVPYAHYGIMGRLPKNR 265
           +L ENLMDPAHVPYAHYGIM R P+ +
Sbjct: 244 VLIENLMDPAHVPYAHYGIM-RTPQRK 268

[Close]
BLAST of Csa1G600140 vs. TAIR10
Match: AT4G25650.2 (AT4G25650.2 ACD1-like)

HSP 1 Score: 377.1 bits (967), Expect = 8.9e-105
Identity = 168/246 (68.29%), Postives = 197/246 (80.08%), Query Frame = 1 

Query: 19  KPQFPNQC-LQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQESAN-PFQVDAESEPGE 78
           KP+F  +C    P  P S +S I R++  F     +  + S   S N P + +A  EPG 
Sbjct: 19  KPRF--RCSFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGS 78

Query: 79  ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSE 138
           ++FDWYA WYP+MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV DD CPHRLAPLS+
Sbjct: 79  DKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSD 138

Query: 139 GRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFW 198
           GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAV+PS VQ++++WFW
Sbjct: 139 GRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFW 198

Query: 199 PNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGI 258
           PNSDP+YK+I+E  KPPYIPEL+DPSFTKL+ NRD+PYGY++L ENLMDPAHVPYAHYG+
Sbjct: 199 PNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGL 258

Query: 259 MGRLPK 263
           M R PK
Sbjct: 259 M-RFPK 261

[Close]
BLAST of Csa1G600140 vs. TAIR10
Match: AT3G44880.1 (AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 192.6 bits (488), Expect = 3.1e-49
Identity = 109/270 (40.37%), Postives = 148/270 (54.81%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFT-SKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFN--LCAITSSTI 60
           M V+ LSS+    T S+  K  F +   + PL  S S S    R+ +F+  L      ++
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS----RSKLFHNPLRVAAPPSV 60

Query: 61  STQESANPFQVDAE-----SEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
            T +S    +++ E      E G E F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  PTSDSTEEKRIEEEYGGDKEEEGSE-FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  FDDLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIP-ELDDPSFTKLISN 240
                S RAC   FP++V   +L+ WP  D    D     +PP +P + D P F+ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYEILTENLMDPAHVPYAHYGIMGR 260
           RDL YGY+ L EN+ DP+H+ +AH+ + GR
Sbjct: 241 RDLFYGYDTLMENVSDPSHIDFAHHKVTGR 263

[Close]
BLAST of Csa1G600140 vs. TAIR10
Match: AT2G24820.1 (AT2G24820.1 translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30
Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 1 

Query: 8   SSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ-ESANPF 67
           +SP+ FT     P   N      + P+     + RR+      A+  + +S Q E     
Sbjct: 15  TSPILFTKVTPTPIIHNHRSTCTI-PTKPRLRLLRRS------AVAGTAVSDQTEGGGDV 74

Query: 68  QVDAESEPGEE--RFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFD 127
            ++ E E   E   +DW  +WYP+    ++ +  P G TV    +V++ D  E   + ++
Sbjct: 75  LLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYE 134

Query: 128 DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVF 187
           D CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K ACV  +
Sbjct: 135 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPASAK---IPKAACVKTY 194

Query: 188 PSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLM 247
                  V+W W ++    K     +K P+      P F  + +  +LPY + IL ENLM
Sbjct: 195 EVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLM 247

Query: 248 DPAHVPYAH 254
           DPAHVP +H
Sbjct: 255 DPAHVPISH 247

[Close]
BLAST of Csa1G600140 vs. NCBI nr
Match: gi|778663338|ref|XP_004144087.2| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 573.5 bits (1477), Expect = 1.8e-160
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60
           MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120
           ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW
Sbjct: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180
           KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180

Query: 181 VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240
           VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT
Sbjct: 181 VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240

Query: 241 ENLMDPAHVPYAHYGIMGRLPKNR 265
           ENLMDPAHVPYAHYGIMGRLPKNR
Sbjct: 241 ENLMDPAHVPYAHYGIMGRLPKNR 264

[Close]
BLAST of Csa1G600140 vs. NCBI nr
Match: gi|700211278|gb|KGN66374.1| (hypothetical protein Csa_1G600140 [Cucumis sativus])

HSP 1 Score: 573.5 bits (1477), Expect = 1.8e-160
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60
           MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120
           ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW
Sbjct: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180
           KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180

Query: 181 VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240
           VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT
Sbjct: 181 VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240

Query: 241 ENLMDPAHVPYAHYGIMGRLPKNR 265
           ENLMDPAHVPYAHYGIMGRLPKNR
Sbjct: 241 ENLMDPAHVPYAHYGIMGRLPKNR 264

[Close]
BLAST of Csa1G600140 vs. NCBI nr
Match: gi|659100308|ref|XP_008451029.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 544.7 bits (1402), Expect = 9.2e-152
Identity = 252/265 (95.09%), Postives = 257/265 (96.98%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60
           MD+LKLSSSPLHFT KF+KPQFPNQCL+IPLFPSSSSSSINRRNP F LCAITSS ISTQ
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120
           ESANPFQV+AESE GEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW
Sbjct: 61  ESANPFQVEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180
           KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC 180

Query: 181 VAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240
           VAV+PSIVQNDVLWFWPNSDPQYKDIM KKKPPYIPELDDPSFTKLISNRDLPYGYEILT
Sbjct: 181 VAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEILT 240

Query: 241 ENLMDPAHVPYAHYGIMGR-LPKNR 265
           ENLMDPAHVPYAHYGIMGR  PKNR
Sbjct: 241 ENLMDPAHVPYAHYGIMGRQQPKNR 265

[Close]
BLAST of Csa1G600140 vs. NCBI nr
Match: gi|659100312|ref|XP_008451031.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 5.8e-130
Identity = 216/261 (82.76%), Postives = 236/261 (90.42%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60
           MDVLKLSSSPLHFT+K +K QFP QC+QIPLFPSSS SSINR N  F LCA   +T ST+
Sbjct: 3   MDVLKLSSSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRSFKLCA---TTFSTE 62

Query: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120
           E+ NPF+V+A+SE    RFDWYAQWYPIMPICDLDKRVP GKTVMGIDVVVWWDKNES W
Sbjct: 63  ETGNPFEVEAQSE---RRFDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNESGW 122

Query: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPVHTSKR 180
           KVFDDLCPHRLAPLSEGRID+WGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPPVHTSKR
Sbjct: 123 KVFDDLCPHRLAPLSEGRIDEWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPPVHTSKR 182

Query: 181 ACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEI 240
           ACV+V+PS+VQND+LWFWPNSDPQYKDIM KK PP+IPELDDPS+TKLI +RDLPYGYE+
Sbjct: 183 ACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYGYEV 242

Query: 241 LTENLMDPAHVPYAHYGIMGR 260
           LTENLMDPAHVPYAHYGI+ R
Sbjct: 243 LTENLMDPAHVPYAHYGIVSR 257

[Close]
BLAST of Csa1G600140 vs. NCBI nr
Match: gi|659100310|ref|XP_008451030.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 5.8e-130
Identity = 216/261 (82.76%), Postives = 236/261 (90.42%), Query Frame = 1 

Query: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60
           MDVLKLSSSPLHFT+K +K QFP QC+QIPLFPSSS SSINR N  F LCA   +T ST+
Sbjct: 3   MDVLKLSSSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRSFKLCA---TTFSTE 62

Query: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120
           E+ NPF+V+A+SE    RFDWYAQWYPIMPICDLDKRVP GKTVMGIDVVVWWDKNES W
Sbjct: 63  ETGNPFEVEAQSE---RRFDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNESGW 122

Query: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPVHTSKR 180
           KVFDDLCPHRLAPLSEGRID+WGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPPVHTSKR
Sbjct: 123 KVFDDLCPHRLAPLSEGRIDEWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPPVHTSKR 182

Query: 181 ACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEI 240
           ACV+V+PS+VQND+LWFWPNSDPQYKDIM KK PP+IPELDDPS+TKLI +RDLPYGYE+
Sbjct: 183 ACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYGYEV 242

Query: 241 LTENLMDPAHVPYAHYGIMGR 260
           LTENLMDPAHVPYAHYGI+ R
Sbjct: 243 LTENLMDPAHVPYAHYGIVSR 257

The following BLAST results are available for this feature:
BLAST of Csa1G600140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTC52_ARATH1.6e-10368.29Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop... [more]
PAO_ARATH5.5e-4840.37Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1[more]
TIC55_ARATH4.4e-2933.33Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=1 SV=1[more]
TIC55_PEA5.8e-2939.46Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1[more]
CAO_DUNSA5.2e-1431.49Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1[more]
BLAST of Csa1G600140 vs. TrEMBL
Match NameE-valueIdentityDescription
M5W8K1_PRUPE1.9e-10869.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004005mg PE=4 SV=1[more]
A0A0D2P555_GOSRA5.3e-10666.92Uncharacterized protein OS=Gossypium raimondii GN=B456_004G016400 PE=4 SV=1[more]
A0A0B0NPL7_GOSAR1.5e-10566.17Protochlorophyllide-dependent translocon component 52, chloroplastic-like protei... [more]
A0A067L4E1_JATCU1.3e-10468.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01891 PE=4 SV=1[more]
W9SBE7_9ROSA1.2e-10267.42Protochlorophyllide-dependent translocon component 52 OS=Morus notabilis GN=L484... [more]
BLAST of Csa1G600140 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25650.28.9e-10568.29 ACD1-like[more]
AT3G44880.13.1e-4940.37 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
AT2G24820.12.5e-3033.33 translocon at the inner envelope membrane of chloroplasts 55-II[more]
BLAST of Csa1G600140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663338|ref|XP_004144087.2|1.8e-160100.00PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|700211278|gb|KGN66374.1|1.8e-160100.00hypothetical protein Csa_1G600140 [Cucumis sativus][more]
gi|659100308|ref|XP_008451029.1|9.2e-15295.09PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|659100312|ref|XP_008451031.1|5.8e-13082.76PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|659100310|ref|XP_008451030.1|5.8e-13082.76PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU104488cucumber EST collection version 3.0transcribed_cluster
CU126185cucumber EST collection version 3.0transcribed_cluster
CU127579cucumber EST collection version 3.0transcribed_cluster
CU162673cucumber EST collection version 3.0transcribed_cluster
CU169130cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G600140.1Csa1G600140.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU104488CU104488transcribed_cluster
CU127579CU127579transcribed_cluster
CU169130CU169130transcribed_cluster
CU162673CU162673transcribed_cluster
CU126185CU126185transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 84..202
score: 5.5
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 84..168
score: 2.2
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 85..195
score: 27
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 67..201
score: 2.36
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 36..259
score: 4.6E
NoneNo IPR availablePANTHERPTHR21266:SF25PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTICcoord: 36..259
score: 4.6E
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 191..261
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G600140Cucurbita maxima (Rimu)cmacuB057
Csa1G600140Cucurbita maxima (Rimu)cmacuB085
Csa1G600140Cucurbita moschata (Rifu)cmocuB075
Csa1G600140Cucurbita moschata (Rifu)cmocuB047
Csa1G600140Melon (DHL92) v3.5.1cumeB041
Csa1G600140Watermelon (Charleston Gray)cuwcgB045
Csa1G600140Watermelon (Charleston Gray)cuwcgB046
Csa1G600140Watermelon (97103) v1cuwmB020
Csa1G600140Cucurbita pepo (Zucchini)cpecuB349
Csa1G600140Cucurbita pepo (Zucchini)cpecuB652
Csa1G600140Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G600140Cucumber (Gy14) v2cgybcuB002
Csa1G600140Melon (DHL92) v3.6.1cumedB033
Csa1G600140Silver-seed gourdcarcuB0015
Csa1G600140Silver-seed gourdcarcuB0192
Csa1G600140Watermelon (97103) v2cuwmbB042
Csa1G600140Wax gourdcuwgoB094
Csa1G600140Cucumber (Gy14) v1cgycuB205