Csa1G600910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G600910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipid-transfer protein-like protein; contains IPR016140 (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain)
LocationChr1 : 23290510 .. 23293006 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGTAGCCGGTAGCTGCTCCCATTAATTTCCCTCACCTTCCCATCTCTATTTCATCACTTCAATTCCACCGCCCCTCCTTCAAAACCAACTAAAATTAAACCAAAACACCTTCACATCGCGAGCAATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCGTAAGCTTTCTTTCTTTTTTCATCTTTCCTCTTCAATTTCTTTCCTTTATGATATCAAATATACCAAACTCAGCTAATTAATTTATAAACATAGGGAAGGCTTCTTTAATGATAGATTATAAATATTAATACATACTCTCTCTATCAGATCTATTACAAAATCAAAATTGATACTAAAATTCTCCAATAAATCAATTGATTTTTTTTTTTTTTTGTTATTTTCAAATATAGTGGTTTATTTTGGTACACTATTATAATATTTTATTATATTCATAAATATTTTACCCTTAGAGTTTTTATTTTTAAAATAATTTATTTAAAAATTTTCACATTTATCATATACAAAATTAGGAGTTTGAATGATTAAATATTTTCGTCCTAATTTTGTTATTTGCAATCTCTAGAAAAGCAAAGCAAATTTTGAAATAAAAAAAGGTTTTCACACACTTTTATATCTTTTCTCTAAAATATTAAACTAAGAATTTAATATTTCTTGAAAAACGTGAAAATGTAGTATGAAATTGATAAGAAAACAAAGTATAAATTACAAAAAAATCTAATTTAAGAAAAGAAAATTTTGCTTAAACGAATCTTAGAAATCAAGGACTTGGTAAAGAATCCGAATTATGTGATAATCTCGATTTTGTTTCTTAAAACTGTTATCTGATTATGTGATCCGATCCAAATAGTATAATTCTGAAAATAATTTTTTATGTTTTTATTGTATCCAAAATTTGAATTTTACATTTTAAAGAGCATAATTACATACGTATAAAAAAATTCAATTCATATTTTTAAATATAATATAGATCCTATAATGTATTATAAATCCTATCATAGTGCAAAATAATAATCATTTTAGTTAAATTATATTTATATAATTTGGTCGTGTGATTTTAAAATAGTAGAGTTTAGTCTATAGTTTATAACTAAAATTTAATCCTTTTGTTTAATAAAATCTTCTTATCAAACTATGAGATTTTTTAGTAGAATGTTTCAAACAAACATTATTACATAAACTAATATATTAACTTTGCTATCAAGATGCCCTTTTCCCCCCTAGAAAATTCAAATAGATATCACAAGCATCTTTAATAAATATCATCATAACAGGAGGCTACTTAGCACTAAGTTTGAACGTTAAATTGAAACCAAACCAATGACTTTATAACAAAATCTTGTAAATCAGAACTGGTATGATCAACTAATCTCAATGGTTTGGTTGTAGTCTCACTCCAACTTCAACTCCACCAACAACACCATTTGATATAAAGTTTAATTTAGTTTGTTCTTTGCCAAGTTCAAATTCAAACCGATAAGTGGTTTCAATTGGTTTGAGCGCCTTTCAAATTATCGGTTCTTCCTTGCACCCCTAACCAGCTCAAATCTGTGTTCTTCTAAATGCAGTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTAATAAATCATACACTTTTTTTGTTTTGTGGAAATAATGAAACGCTATACTTTCACAATTTGAGACTATGCTAAACTAAAATTTCATTGTTAAATGTTAAAACATACCTAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAACCTTTGATTATCTATAAAATTGTTTGCCTATTCTTCTGTCTTTCCTTTTCAGTTTAGAAGTCATTGTATTTGTATTTTATTGTATTGTACTGTACTGAGATATTTTCATGATTGTTAGGCCAATAAAATGTTAGCTTCTATTGAACTATTTTGTTGAAAGTGAAACCACCTGCCCTACAACTTCTAAGGGAAATGTTTGTTTCTGTTGTGGTAAAGATTTAAAGGTTTTCATGATGTGATGGCAAAAATCTGTAGATGTAACTTTGCAGCATTAAATGGTAACTAATCGAGATGGTAGCAAAGCAATTGA

mRNA sequence

ATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAA

Coding sequence (CDS)

ATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAA

Protein sequence

MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF*
Homology
[Close]
BLAST of Csa1G600910 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-23
Identity = 66/159 (41.51%), Postives = 85/159 (53.46%), Query Frame = 1 

Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

[Close]
BLAST of Csa1G600910 vs. Swiss-Prot
Match: XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-23
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 1 

Query: 11  VAVLVIMAIEGISGQAP-APGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+P AP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]
BLAST of Csa1G600910 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 1 

Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDT 149
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P    G+    +
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSPTAGAGAPALSS 137

Query: 150 PGN-----SGNRASSIDHLRLAFPLGLALAFIPALF 181
             N     S  R+S    L ++F   + +A I + +
Sbjct: 138 GANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]
BLAST of Csa1G600910 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-17
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 1 

Query: 8   ILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCC 67
           +L+++ + ++        APAP       VDC T +L M+DCL +V++G    KP   CC
Sbjct: 18  LLSLSSVSVLGASHHHATAPAPS------VDCSTLILNMADCLSFVSSGGTVAKPEGTCC 77

Query: 68  SELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSS 127
           S L  +++   +CLCE       +G T+++ +A  LP  C +  PSI+ C   G  V  S
Sbjct: 78  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC---GLSVAPS 137

Query: 128 NSPAPSPGVQ---PPDAGGSSTTDTPGNSGN 156
            +P  +PGV    P  AG  +   + GN G+
Sbjct: 138 TAPGLAPGVAAAGPETAGFLAPNPSSGNDGS 159

[Close]
BLAST of Csa1G600910 vs. Swiss-Prot
Match: NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 1 

Query: 2   AAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSN-DT 61
           AA    +L V +  +  ++G +  +PAP P     VDC    L ++DCL YVT G    +
Sbjct: 7   AAAVACLLVVGLAAVAGVDGATASSPAPAPA----VDCTAEALKLADCLDYVTPGKTAPS 66

Query: 62  KPNKQCCSELAGLVENSPK--CLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCS 121
           +P+K CC E+ G +++S    CLC   +    +   I++ RA+ LP  C     + S C 
Sbjct: 67  RPSKLCCGEVKGALKDSAAVGCLCAAFTS-KTLPLPINITRALHLPAACGADASAFSKCL 126

Query: 122 LLGYPVGSSNSPAPSPGVQPPDAGGS 145
                     +PAPSP V P  + GS
Sbjct: 127 ----------APAPSPSVAPGTSSGS 137

[Close]
BLAST of Csa1G600910 vs. TrEMBL
Match: A0A0A0M2I0_CUCSA (Lipid binding protein OS=Cucumis sativus GN=Csa_1G600910 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1 

Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

[Close]
BLAST of Csa1G600910 vs. TrEMBL
Match: A0A067FT09_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029668mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.3e-33
Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 1 

Query: 10  AVAVLVIMAIEGISGQAPAPGPG-AVG-----EVDCFTTLLGMSDCLPYVTTGSNDTKPN 69
           A  ++++  I   SGQA APGP  A G     E DC T +L MSDCL YVT GSN T P+
Sbjct: 17  AFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPD 76

Query: 70  KQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYP 129
           K CC ELAGLVE++P CLC+LL   +  G  ID+ RA+KLP+ C V+TP ++LCSL G P
Sbjct: 77  KPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVP 136

Query: 130 V-GSSNSPAP-SPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFI 177
           +   + SP P SPG QPP   G + + + GN+ N AS      L   +GLA+AF+
Sbjct: 137 IEAPTGSPGPASPGTQPP--SGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFL 189

[Close]
BLAST of Csa1G600910 vs. TrEMBL
Match: B9S6L0_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1109430 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-32
Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = 1 

Query: 28  APGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSD 87
           APGP      DC T LL MSDCL YVT  SN T P+K CC ELAGL++ +P CLC+LL +
Sbjct: 53  APGPATN---DCLTPLLNMSDCLSYVTESSNVTVPDKNCCPELAGLLDGNPICLCQLLGN 112

Query: 88  ---PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPV----GSSNSPAP----SPGV 147
               +  GF IDV+RA+KLP+ C VSTP +SLCS+ GYPV     S  SP+P    +PGV
Sbjct: 113 SNLTESYGFKIDVNRALKLPSICRVSTPPVSLCSVAGYPVPGPIASEASPSPMDNQTPGV 172

Query: 148 QPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
            PP+  G +++ + GN+GN AS +     AF +GLA +F+   F
Sbjct: 173 APPE--GLASSPSTGNNGNGASGVAGSAQAFFVGLAFSFLLTFF 211

[Close]
BLAST of Csa1G600910 vs. TrEMBL
Match: A0A059DAP6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03788 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-32
Identity = 79/168 (47.02%), Postives = 108/168 (64.29%), Query Frame = 1 

Query: 11  VAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSEL 70
           +A +++  + G S Q PA  PG   + +C + LL ++DCL YVT+GS  T P K CC EL
Sbjct: 11  LAAVLLATVCGASAQMPAAAPGPAAD-ECLSNLLNLTDCLSYVTSGSKLTAPEKPCCGEL 70

Query: 71  AGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVG-SSNS 130
           AGL+++ P CLCELLS     G +IDV+RA+KLP+ C+V+TP +S C+ +G PVG  + +
Sbjct: 71  AGLLDSHPICLCELLSKASSFGISIDVNRAIKLPSVCNVATPPLSTCAAVGVPVGVPAGA 130

Query: 131 PAPSPGVQP----PDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLAL 174
           P   PG  P    P AG SS   TPGN+GNRAS  + L LA  +G A+
Sbjct: 131 PVGVPGTAPGSLAPTAGASS--PTPGNTGNRASQ-NALLLAAGVGAAI 174

[Close]
BLAST of Csa1G600910 vs. TrEMBL
Match: V4TH15_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016831mg PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-31
Identity = 84/173 (48.55%), Postives = 108/173 (62.43%), Query Frame = 1 

Query: 10  AVAVLVIMAIEGISGQAPAPGPG-AVG-----EVDCFTTLLGMSDCLPYVTTGSNDTKPN 69
           A  ++++  I   SGQA APGP  A G     E DC   +L MSDCL YVT GSN T P+
Sbjct: 18  AFFLIMVSCIGSSSGQALAPGPYMAFGPSPSPEDDCLMKVLNMSDCLSYVTEGSNVTVPD 77

Query: 70  KQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYP 129
           K CC ELAGLVE++P CLC+LL   +  G  ID+ RA+KLP+ C V+TP ++LCSL G P
Sbjct: 78  KPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVP 137

Query: 130 V-GSSNSPAP-SPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALA 175
           +   + SP P SPG QPP   G + + + GN+ N AS      LA  +GLA+A
Sbjct: 138 IEAPTGSPGPASPGTQPP--SGLAASPSNGNNDNAASGNAGSVLALLVGLAVA 188

[Close]
BLAST of Csa1G600910 vs. TAIR10
Match: AT3G43720.1 (AT3G43720.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 66/159 (41.51%), Postives = 85/159 (53.46%), Query Frame = 1 

Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

[Close]
BLAST of Csa1G600910 vs. TAIR10
Match: AT2G27130.1 (AT2G27130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-24
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 1 

Query: 11  VAVLVIMAIEGISGQAP-APGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+P AP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]
BLAST of Csa1G600910 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-20
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 1 

Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDT 149
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P    G+    +
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSPTAGAGAPALSS 137

Query: 150 PGN-----SGNRASSIDHLRLAFPLGLALAFIPALF 181
             N     S  R+S    L ++F   + +A I + +
Sbjct: 138 GANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]
BLAST of Csa1G600910 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 1 

Query: 39  CFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLS-DPDKVGFTIDV 98
           C   L+ MS CL Y+T   N T PN+QCC++L+ +V++SP CLC++L+    ++G  ++ 
Sbjct: 28  CTNALISMSPCLNYIT--GNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQ 87

Query: 99  DRAMKLPTQCHVSTPSISLCSLLGYPVGS-SNSPAPSPGVQPPDAGGSSTTDTPGNSGNR 158
            +A+ LP  C+V TP +S C+  G   GS S+SPA SP    P   GS T       G  
Sbjct: 88  TQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAESPNSSGP-GNGSKTVPVGEGDGPP 147

Query: 159 ASSIDHLRLAFPLGLALAFIPAL 180
           +S    ++ +FPL   +AF  A+
Sbjct: 148 SSDGSSIKFSFPL---IAFFSAV 164

[Close]
BLAST of Csa1G600910 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 1 

Query: 8   ILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCC 67
           +L+++ + ++        APAP       VDC T +L M+DCL +V++G    KP   CC
Sbjct: 18  LLSLSSVSVLGASHHHATAPAPS------VDCSTLILNMADCLSFVSSGGTVAKPEGTCC 77

Query: 68  SELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSS 127
           S L  +++   +CLCE       +G T+++ +A  LP  C +  PSI+ C   G  V  S
Sbjct: 78  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC---GLSVAPS 137

Query: 128 NSPAPSPGVQ---PPDAGGSSTTDTPGNSGN 156
            +P  +PGV    P  AG  +   + GN G+
Sbjct: 138 TAPGLAPGVAAAGPETAGFLAPNPSSGNDGS 159

[Close]
BLAST of Csa1G600910 vs. NCBI nr
Match: gi|449452718|ref|XP_004144106.1| (PREDICTED: xylogen-like protein 11 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1 

Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

[Close]
BLAST of Csa1G600910 vs. NCBI nr
Match: gi|659100398|ref|XP_008451079.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 9.9e-81
Identity = 155/178 (87.08%), Postives = 161/178 (90.45%), Query Frame = 1 

Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAVAT-MAIEGISGQAPAPGPA--GEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGS  SPAPSPGVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGS--SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 174

[Close]
BLAST of Csa1G600910 vs. NCBI nr
Match: gi|659100396|ref|XP_008451078.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.8e-80
Identity = 152/178 (85.39%), Postives = 160/178 (89.89%), Query Frame = 1 

Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAVAT-MAIEGISGQAPAPGPA--GEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGSS +P+P  GVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 176

[Close]
BLAST of Csa1G600910 vs. NCBI nr
Match: gi|568832384|ref|XP_006470415.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2-like [Citrus sinensis])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 87/175 (49.71%), Postives = 111/175 (63.43%), Query Frame = 1 

Query: 10  AVAVLVIMAIEGISGQAPAPGPG-AVG-----EVDCFTTLLGMSDCLPYVTTGSNDTKPN 69
           A  ++++  I   SGQA APGP  A G     E DC T +L MSDCL YVT GSN T P+
Sbjct: 17  AFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPD 76

Query: 70  KQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYP 129
           K CC ELAGLVE++P CLC+LL   +K G  ID+ RA+KLP+ C VSTP ++LCSL G P
Sbjct: 77  KPCCPELAGLVESNPICLCQLLGKNNKYGIKIDMTRALKLPSVCGVSTPPVNLCSLAGVP 136

Query: 130 V-GSSNSPAP-SPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFI 177
           +   + SP P SPG QPP   G + + + GN+ N AS      L   +GLA+AF+
Sbjct: 137 IEAPTGSPGPASPGTQPP--SGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFL 189

[Close]
BLAST of Csa1G600910 vs. NCBI nr
Match: gi|1009113693|ref|XP_015873284.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 [Ziziphus jujuba])

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 87/186 (46.77%), Postives = 112/186 (60.22%), Query Frame = 1 

Query: 8   ILAVAVLVIMAIEGISGQ-----APAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 67
           ++ V V ++M+  G+S       APAPGP +    DCFT +LG++DCL YV  GSN T P
Sbjct: 11  MVVVVVAMLMSFYGVSAHDAPIAAPAPGPSST---DCFTVVLGLADCLSYVQEGSNVTVP 70

Query: 68  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 127
           +K CC EL GLV+NSP CLC LL++ + +G  ID  RA+ LP+ C V+TP  SLCSL GY
Sbjct: 71  DKPCCPELKGLVDNSPICLCYLLANSNSLGVPIDTKRALNLPSVCKVTTPPPSLCSLAGY 130

Query: 128 PV-GSSNSPAPSPGVQP-------PDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALA 181
           PV G  +S   SPG QP       P  G +S  D  G S N ASS     +A  +G A+A
Sbjct: 131 PVPGPVSSEIASPGPQPSEGSVSSPSPGATSKNDN-GASSNAASS----AMALLIGFAIA 188

The following BLAST results are available for this feature:
BLAST of Csa1G600910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LTPG2_ARATH3.2e-2341.51Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT... [more]
XYP11_ARATH9.4e-2341.22Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2[more]
NLTL2_ARATH3.7e-1933.33Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia... [more]
NLTL5_ARATH4.5e-1732.45Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
NLTL1_ORYSJ1.0e-1332.19Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LT... [more]
BLAST of Csa1G600910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2I0_CUCSA1.1e-99100.00Lipid binding protein OS=Cucumis sativus GN=Csa_1G600910 PE=4 SV=1[more]
A0A067FT09_CITSI5.3e-3348.57Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029668mg PE=4 SV=1[more]
B9S6L0_RICCO3.5e-3249.39Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1109430 PE=4 SV=1[more]
A0A059DAP6_EUCGR5.9e-3247.02Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03788 PE=4 SV=1[more]
V4TH15_9ROSI1.7e-3148.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016831mg PE=4 SV=1[more]
BLAST of Csa1G600910 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G43720.11.8e-2441.51 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G27130.15.3e-2441.22 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G13820.12.1e-2033.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G22600.11.0e-1937.76 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G64080.12.5e-1832.45 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Csa1G600910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452718|ref|XP_004144106.1|1.6e-99100.00PREDICTED: xylogen-like protein 11 [Cucumis sativus][more]
gi|659100398|ref|XP_008451079.1|9.9e-8187.08PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumi... [more]
gi|659100396|ref|XP_008451078.1|3.8e-8085.39PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumi... [more]
gi|568832384|ref|XP_006470415.1|1.2e-3349.71PREDICTED: non-specific lipid transfer protein GPI-anchored 2-like [Citrus sinen... [more]
gi|1009113693|ref|XP_015873284.1|1.5e-3346.77PREDICTED: non-specific lipid transfer protein GPI-anchored 2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009086 methionine biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU104488cucumber EST collection version 3.0transcribed_cluster
CU107772cucumber EST collection version 3.0transcribed_cluster
CU121075cucumber EST collection version 3.0transcribed_cluster
CU154602cucumber EST collection version 3.0transcribed_cluster
CU167852cucumber EST collection version 3.0transcribed_cluster
CU171096cucumber EST collection version 3.0transcribed_cluster
CU174350cucumber EST collection version 3.0transcribed_cluster
CU174733cucumber EST collection version 3.0transcribed_cluster
CU175174cucumber EST collection version 3.0transcribed_cluster
CU176350cucumber EST collection version 3.0transcribed_cluster
CU176794cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G600910.1Csa1G600910.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU104488CU104488transcribed_cluster
CU107772CU107772transcribed_cluster
CU174733CU174733transcribed_cluster
CU174350CU174350transcribed_cluster
CU121075CU121075transcribed_cluster
CU171096CU171096transcribed_cluster
CU176350CU176350transcribed_cluster
CU175174CU175174transcribed_cluster
CU167852CU167852transcribed_cluster
CU154602CU154602transcribed_cluster
CU176794CU176794transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 15..117
score: 6.4
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 39..117
score: 4.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 37..118
score: 1.83
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 37..117
score: 6.3
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 8..180
score: 5.1
NoneNo IPR availablePANTHERPTHR33044:SF24NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-RELATEDcoord: 8..180
score: 5.1