CsGy1G028910 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G028910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	non-specific lipid transfer protein GPI-anchored 2 isoform X2
Location	Chr1 : 26935999 .. 26938884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTTTAAAAATATAATAATAATAGATGAAAGTGGTATGAATATGTATGAGAATAGCATAAATAATAGTGTATGGTAAATATTTGAGTCATTAATAATAATAATGGTTTGTATCATATTTTGGTGAAAGAAAAAAAAGAAGAAGAAGGGTTTGTTATTTAATTAATAGGAGGTGGATAAATAAATAAGAATAATAAATATAGAGAGAAAAAGGGTAATAAAAGAGTCCTTCAATGGCGGTAGCCGGTAGCTGCTCCCATTAATTTCCCTCACCTTCCCATCTCTATTTCATCACTTCAATTCCACCGCCCCTCCTTCAAAACCAACTAAAATTAAACCAAAACACCTTCACATCGCGAGCAATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCGTAAGCTTTCTTTCTTTTTTCATCTTTCCTCTTCAATTTCTTTCCTTTATGATATCAAATATACCAAACTCAGCTAATTAATTTATAAACATAGGGAAGGCTTCTTTAATGATAGATTATAAATATTAATACATACTCTCTCTATCAGATCTATTACAAAATCAAAATTGATACTAAAATTCTCCAATAAATCAATTGATTTTTTTTTTTTTTGTTATTTTCAAATATAGTGGTTTATTTTGGTACACTATTATAATATTTTATTATATTCATAAATATTTTACCCTTAGAGTTTTTATTTTTAAAATAATTTATTTAAAAATTTTCACATTTATCATATACAAAATTAGGAGTTTGAATGATTAAATATTTTCGTCCTAATTTTGTTATTTGCAATCTCTAGAAAAGCAAAGCAAATTTTGAAATAAAAAAAGGTTTTCACACACTTTTATATCTTTTCTCTAAAATATTAAACTAAGAATTTAATATTTCTTGAAAAACGTGAAAATGTAGTATGAAATTGATAAGAAAACAAAGTATAAATTACAAAAAAATCTAATTTAAGAAAAGAAAATTTTGCTTAAACGAATCTTAGAAATCAAGGACTTGGTAAAGAATCCGAATTATGTGATAATCTCGATTTTGTTTCTTAAAACTGTTATCTGATTATGTGATCCGATCCAAATAGTATAATTCTGAAAATAATTTTTTATGTTTTTATTGTATCCAAAATTTGAATTTTACATTTTAAAGAGCATAATTACATACGTATAAAAAAATTCAATTCATATTTTTAAATATAATATAGATCCTATAATGTATTATAAATCCTATCATAGTGCAAAATAATAATCATTTTAGATTAAGTTATAAATTTGGTCGTGTGATTTTAAAATAGTAGAGTTTAGTCTATAGTTTATAACTAAAATTTAATCCTTTTGTTTAATAAAATCTTCTTATCAAACTATGAGATTTTTTAGTAGAATGTTTCAAACAAACATTATTACATAAACTAATATATTAACTTTGCTATCAAGATGCCCTTTTCCCCCCTAGAAAATTCAAATAGATATCACAAGCATCTTTAATAAATATCATCATAACAGGAGGCTACTTAGCACTAAGTTTGAACGTTAAATTGAAACCAAACCAATGACTTTATAACAAAATCTTGTAAATCAGAACTGGTATGATCAACTAATCTCAATGGTTTGGTTGTAGTCTCACTCCAACTTCAACTCCACCAACAACACCATTTGATATAAAGTTTAATTTAGTTTGTTCTTTGCCAAGTTCAAATTCAAACCGATAAGTGGTTTCAATTGGTTTGAGCGCCTTTCAAATTATCGGTTCTTCCTTGCACCCCTAACCAGCTCAAATCTGTGTTCTTCTAAATGCAGTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTAATAAATCATACACTTTTTTTGTTTTGTGGAAATAATGAAACGCTATACTTTCACAATTTGAGACTATGCTAAACTAAAATTTCATTGTTAAATGTTAAAACATACCTAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAACCTTTGATTATCTATAAAATTGTTTGCCTATTCTTCTGTCTTTCCTTTTCAGTTTAGAAGTCATTGTATTTGTATTTTATTGTATTGTACTGTACTGAGATATTTTCATGATTGTTAGGCCAATAAAATGTTAGCTTCTATTGAACTATTTTGTTGAAAGTGAAACCACCTGCCCTACAACTTCTAAGGGAAATGTTTGTTTCTGTTGTGGTAAAGATTTAAAGGTTTTCATGATGTGATGGCAAAAATCTGTAGATGTAACTTTGCAGCATTAAATGGTAACTAATCGAGATGGTAGCAAAGCAATTGACATTTTGTATGCATTATGTGTTGGCATAAGGATGAAGTTTGGTAGAGTTATTAACTTTTCTCTTTATTTCATCAGATTGCATGACTAAAAAGCATCAGTTTTATGACTCAAACTCTTTCTCTAATATTGGCTCTAAAAAGTTTGTTTGTTGATCTTAAT

mRNA sequence

CCCTTTTAAAAATATAATAATAATAGATGAAAGTGGTATGAATATGTATGAGAATAGCATAAATAATAGTGTATGGTAAATATTTGAGTCATTAATAATAATAATGGTTTGTATCATATTTTGGTGAAAGAAAAAAAAGAAGAAGAAGGGTTTGTTATTTAATTAATAGGAGGTGGATAAATAAATAAGAATAATAAATATAGAGAGAAAAAGGGTAATAAAAGAGTCCTTCAATGGCGGTAGCCGGTAGCTGCTCCCATTAATTTCCCTCACCTTCCCATCTCTATTTCATCACTTCAATTCCACCGCCCCTCCTTCAAAACCAACTAAAATTAAACCAAAACACCTTCACATCGCGAGCAATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAACCTTTGATTATCTATAAAATTGTTTGCCTATTCTTCTGTCTTTCCTTTTCAGTTTAGAAGTCATTGTATTTGTATTTTATTGTATTGTACTGTACTGAGATATTTTCATGATTGTTAGGCCAATAAAATGTTAGCTTCTATTGAACTATTTTGTTGAAAGTGAAACCACCTGCCCTACAACTTCTAAGGGAAATGTTTGTTTCTGTTGTGGTAAAGATTTAAAGGTTTTCATGATGTGATGGCAAAAATCTGTAGATGTAACTTTGCAGCATTAAATGGTAACTAATCGAGATGGTAGCAAAGCAATTGACATTTTGTATGCATTATGTGTTGGCATAAGGATGAAGTTTGGTAGAGTTATTAACTTTTCTCTTTATTTCATCAGATTGCATGACTAAAAAGCATCAGTTTTATGACTCAAACTCTTTCTCTAATATTGGCTCTAAAAAGTTTGTTTGTTGATCTTAAT

Coding sequence (CDS)

ATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAA

Protein sequence

MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF

Homology

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BLAST of CsGy1G028910 vs. NCBI nr
Match: XP_004144106.1 (PREDICTED: xylogen-like protein 11 [Cucumis sativus] >KGN66401.1 Lipid binding protein [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 3.2e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

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BLAST of CsGy1G028910 vs. NCBI nr
Match: XP_008451079.1 (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 155/178 (87.08%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGS  SPAPSPGVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGS--SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 174

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BLAST of CsGy1G028910 vs. NCBI nr
Match: XP_008451078.1 (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 5.8e-77
Identity = 152/178 (85.39%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGSS +P+P  GVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 176

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BLAST of CsGy1G028910 vs. NCBI nr
Match: XP_023516231.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 119/183 (65.03%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 6   PWILAVAVLVIMAIEGISG---QAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 65
           P I A+A  VI+AI GI+G   QAPAPGP      DCFTTLL MSDCL YV+ GS D KP
Sbjct: 4   PSICALAA-VIIAIHGIAGAVAQAPAPGPAVA--TDCFTTLLNMSDCLSYVSAGSKDVKP 63

Query: 66  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 125
           +K CC ELAGLVE+SP CLC+LLSDP+KVG TIDVDRAMKLP+ C+VSTP ++LCSLLG+
Sbjct: 64  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 123

Query: 126 PVGSSNSPA------PSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFI 180
           PVG SNSP           VQP D GGS+T  TPG+SGNRASSI+ L LAFPLG+AL F+
Sbjct: 124 PVG-SNSPGSXXXXXXXXXVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFL 182

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BLAST of CsGy1G028910 vs. NCBI nr
Match: XP_022157355.1 (xylogen-like protein 11 [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 7.1e-51
Identity = 108/159 (67.92%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 26  APAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELL 85
           AP P   A   +DC TTLL MSDCL YV+ GS D +P+K CC ELAGLVE+SP+CLC+LL
Sbjct: 69  APKPPVPAPAAMDCLTTLLNMSDCLSYVSIGSKDHQPDKNCCPELAGLVESSPQCLCQLL 128

Query: 86  SDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPS-----PGVQPPD 145
           SDP K G  IDVDRA+ LP+ C VSTP ISLCSLLGYPV S  SPAP+     PGVQPPD
Sbjct: 129 SDPQKTGLDIDVDRALNLPSACKVSTPPISLCSLLGYPVTSPASPAPAPTTLPPGVQPPD 188

Query: 146 AGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPAL 180
            GG  T  TPGNSGNRASSID L LAFP+GLALAF+P L
Sbjct: 189 VGGLPTNATPGNSGNRASSIDRLHLAFPIGLALAFLPKL 227

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BLAST of CsGy1G028910 vs. TAIR10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 66/159 (41.51%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

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BLAST of CsGy1G028910 vs. TAIR10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQA-PAPGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+ PAP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]

BLAST of CsGy1G028910 vs. TAIR10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQP 139
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSP 122

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BLAST of CsGy1G028910 vs. TAIR10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 48/157 (30.57%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 39  CFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDP-DKVGFTIDV 98
           C +TL  +S CL Y+T   N T P++ CCS L  ++++SP+C+C  ++ P   +G  I+ 
Sbjct: 30  CVSTLTTLSPCLSYIT--GNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINR 89

Query: 99  DRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPD--------------AGG 158
            +A++LP  C++ TP ++ C+    P  ++  PAPSP  + PD               GG
Sbjct: 90  TQALQLPNACNIQTPPLTQCNAATGP--TAQPPAPSPTEKTPDVTLTPTSLPGARSGVGG 149

Query: 159 SSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
            S T     +G+ + ++D L L F +   L    + F
Sbjct: 150 GSKTVPSVGTGSSSRNVDPLPLHFLMFAVLVVCTSSF 182

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BLAST of CsGy1G028910 vs. TAIR10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-14
Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 39  CFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLS-DPDKVGFTIDV 98
           C   L+ MS CL Y+T   N T PN+QCC++L+ +V++SP CLC++L+    ++G  ++ 
Sbjct: 28  CTNALISMSPCLNYIT--GNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQ 87

Query: 99  DRAMKLPTQCHVSTPSISLCS 119
            +A+ LP  C+V TP +S C+
Sbjct: 88  TQALGLPRACNVQTPPVSRCN 106

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BLAST of CsGy1G028910 vs. Swiss-Prot
Match: sp|Q9LZH5|LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.2e-21
Identity = 66/159 (41.51%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

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BLAST of CsGy1G028910 vs. Swiss-Prot
Match: sp|Q9ZVC7|XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=XYP11 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 6.8e-21
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQA-PAPGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+ PAP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]

BLAST of CsGy1G028910 vs. Swiss-Prot
Match: sp|Q9ZQI8|NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana OX=3702 GN=At2g13820 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQP 139
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSP 122

[Close]

BLAST of CsGy1G028910 vs. Swiss-Prot
Match: sp|Q8VYI9|NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana OX=3702 GN=At5g64080 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 13  VLVIMAIEGIS------GQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQC 72
           ++V++++  +S        A AP P     VDC T +L M+DCL +V++G    KP   C
Sbjct: 15  LIVLLSLSSVSVLGASHHHATAPAP----SVDCSTLILNMADCLSFVSSGGTVAKPEGTC 74

Query: 73  CSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGS 132
           CS L  +++   +CLCE       +G T+++ +A  LP  C +  PSI+ C L   P   
Sbjct: 75  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPXXX 134

Query: 133 SNSPAPSPGVQPPDAGGSSTTDTPGNSGN 156
                      P  AG  +   + GN G+
Sbjct: 135 XXXXXXXXXXGPETAGFLAPNPSSGNDGS 159

[Close]

BLAST of CsGy1G028910 vs. TrEMBL
Match: tr|A0A0A0M2I0|A0A0A0M2I0_CUCSA (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.1e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

[Close]

BLAST of CsGy1G028910 vs. TrEMBL
Match: tr|A0A1S3BRS5|A0A1S3BRS5_CUCME (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.7e-78
Identity = 155/178 (87.08%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGS  SPAPSPGVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGS--SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 174

[Close]

BLAST of CsGy1G028910 vs. TrEMBL
Match: tr|A0A1S3BRF5|A0A1S3BRF5_CUCME (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.8e-77
Identity = 152/178 (85.39%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGSS +P+P  GVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 176

[Close]

BLAST of CsGy1G028910 vs. TrEMBL
Match: tr|A0A2P5FUG5|A0A2P5FUG5_9ROSA (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_027370 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 80/149 (53.69%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 38  DCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDV 97
           DC T LLGM+DCL YV  GSN TKP+K CC EL  LV+ +P CLCELL++ D  GF ID+
Sbjct: 54  DCMTLLLGMADCLSYVQIGSNLTKPDKPCCPELKSLVDTNPICLCELLANSDSSGFQIDI 113

Query: 98  DRAMKLPTQCHVSTPSISLCSLLGYPVG---SSNSPAPSPGVQPPDAGGSSTTDTPG-NS 157
           +RA KLP+ C V TP  S C+LLG PVG   SS  P+PS G+ P    GSST  +PG NS
Sbjct: 114 NRATKLPSVCKVDTPPPSTCALLGIPVGVPTSSEGPSPSSGLSP---AGSSTALSPGKNS 173

Query: 158 GNRASSIDHLRLAFPL--GLALAFIPALF 181
           GNRASS     +   L  G A+ F   +F
Sbjct: 174 GNRASSATTASIVAVLVGGFAITFSSTIF 199

[Close]

BLAST of CsGy1G028910 vs. TrEMBL
Match: tr|A0A2N9FM32|A0A2N9FM32_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16105 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.6e-29
Identity = 80/181 (44.20%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 8   ILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCC 67
           I+A ++++      +S QA AP   +     C  +LL MSDCL YV  GSNDTKP K+CC
Sbjct: 11  IVAASIILFSTFYSVSAQAEAPTASSPAGDVCVNSLLNMSDCLSYVMAGSNDTKPVKECC 70

Query: 68  SELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPV- 127
            ELAGL++++P CLCELL     +  G  ID+ RA+KLP+ C + TP +S C+ +GYPV 
Sbjct: 71  PELAGLLDSNPICLCELLGSNVTESYGIKIDLKRALKLPSVCGLQTPPLSTCAAVGYPVP 130

Query: 128 GSSNSPAPS-----PGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPAL 181
           G   +P  S     PG Q P A     T  PGN GN    +    LAF +GL +AF+P L
Sbjct: 131 GPVGAPTASESSIAPGAQSPGA----ATPLPGNDGN---GVLGSTLAFTIGLGIAFLPTL 184

The following BLAST results are available for this feature:

BLAST of CsGy1G028910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144106.1	3.2e-96	100.00	PREDICTED: xylogen-like protein 11 [Cucumis sativus] >KGN66401.1 Lipid binding p...	[more]
XP_008451079.1	1.2e-77	87.08	PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumi...	[more]
XP_008451078.1	5.8e-77	85.39	PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumi...	[more]
XP_023516231.1	4.9e-52	65.03	non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. p...	[more]
XP_022157355.1	7.1e-51	67.92	xylogen-like protein 11 [Momordica charantia]	[more]

BLAST of CsGy1G028910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43720.1	2.9e-22	41.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G27130.1	3.8e-22	41.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.6e-17	39.45	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	4.5e-15	30.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	2.2e-14	40.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy1G028910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZH5\|LTPG2_ARATH	5.2e-21	41.51	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q9ZVC7\|XYP11_ARATH	6.8e-21	41.22	Xylogen-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=XYP11 PE=2 SV=2	[more]
sp\|Q9ZQI8\|NLTL2_ARATH	3.0e-16	39.45	Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia...	[more]
sp\|Q8VYI9\|NLTL5_ARATH	4.0e-13	30.20	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]

BLAST of CsGy1G028910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M2I0\|A0A0A0M2I0_CUCSA	2.1e-96	100.00	Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1	[more]
tr\|A0A1S3BRS5\|A0A1S3BRS5_CUCME	7.7e-78	87.08	non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX...	[more]
tr\|A0A1S3BRF5\|A0A1S3BRF5_CUCME	3.8e-77	85.39	non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX...	[more]
tr\|A0A2P5FUG5\|A0A2P5FUG5_9ROSA	1.3e-29	53.69	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain ...	[more]
tr\|A0A2N9FM32\|A0A2N9FM32_FAGSY	8.6e-29	44.20	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16105 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G028910.1	CsGy1G028910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 39..117 e-value: 4.6E-6 score: 36.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 28..117 e-value: 2.1E-15 score: 56.5
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 37..114 e-value: 1.7E-18 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..156
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 10..174
None	No IPR available	PANTHER	PTHR33044:SF24	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-RELATED	coord: 10..174
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 46..109 e-value: 1.09994E-14 score: 64.3702
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G028910	Cla011078	Watermelon (97103) v1	cgybwmB022
CsGy1G028910	Csa1G600910	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G028910	MELO3C015618	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G028910	ClCG03G014210	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G028910	CSPI01G29600	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G028910	CmaCh10G009830	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G028910	CmoCh10G010370	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G028910	Lsi06G004320	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G028910	Cp4.1LG18g01220	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G028910	MELO3C015618.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G028910	CsaV3_1G042030	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G028910	Cla97C03G064400	Watermelon (97103) v2	cgybwmbB041
CsGy1G028910	Bhi02G001394	Wax gourd	cgybwgoB079
CsGy1G028910	Carg06148	Silver-seed gourd	carcgybB0014

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G028910	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G028910	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G028910	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G028910	Silver-seed gourd	carcgybB0186