Csa1G600890 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G600890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase-like protein; contains IPR021099 (Plant organelle RNA recognition domain)
LocationChr1 : 23286733 .. 23288915 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAGTCACCATCGTCATTTGTTTCTCAGCCGCGCAAACCATAGCTTGATACCGTTCAGCCGCGCGACAAACTCTCGACTTTGACACCGTCCAGATCCGAATTCGGTCACCGTCCAGATCAGTTCACACGCCGTGGCGAAGCCCACTGTTTTCCGTTCGCACGTCGCAGCCCTAATATTTGGACATTCACACGCCGCGCGACCAGATTCGACCATTCAGTCATCACGAAACTCTGTTTGATTTCTATATCCGACCAGATTTGTACGCCAAACTCGCCACTGTTGTTTGCGAGTACCACTGCTGAACCGCCCTCGTCTGTTCAATCTGGGTTGGGCTGAAATTTTGCATTGGTGATATTCTAAAAGGGGGCCTCAGACACTTCACTCAACAAATGACTTTGGTTTTCACTCTCAGAGGAGGAATGATCATCCCGGACATGTTTCCTCAAAATTAGTGATTCTGGTACTAATGTTGTTACTGTGATTGAAGCATATTGTTAGAATATAGATATAATTATTAATTTTATGTTCATCCATTATCTCAAATTTACCTATTATCTCAAATTTACCTTCATCAACGTAAGTTTTTGCGGTCAATGGGTGATTTAACGCATACAATTTTTATTTCTAGGCGTCTATATTTCTTTGTTCATAAAAGAAGCCACAGCTGCTGAATTTGTATTTGAAGAAAGGAGTATGTTATGTGAGACAGAGTGCTCTGGTGAAAATTGTGCATTAAAATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCATCATCTCAATATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAGTGAATACATGAAAATATGCATATTCTTTCAACAATTGTCACATTCAAATTTGTGAAACATTGTCACGAGTCTGAAAGCAGAAAGGAGAATGCTGGAGAGATCAACAATTTTGTTAAGGGAATTTGAATCCATTGGGGGAGTTGATATCTAATTACCAGTATGAAAGACCCTTTTTTAATACATAGAAATCGGAGGAATGGTATATTTTACTGCGTCTTCTTGCAGATGTGAACACCTTTCTTTCAGGGAA

mRNA sequence

ATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCATCATCTCAATATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAGTGA

Coding sequence (CDS)

ATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCATCATCTCAATATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAGTGA

Protein sequence

MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK*
Homology
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BLAST of Csa1G600890 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.1e-59
Identity = 135/368 (36.68%), Postives = 210/368 (57.07%), Query Frame = 1 

Query: 33  RARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLN---RGAPSF 92
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 93  LRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 152
           L K+PH+F I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 153 VPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVE 212
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 213 EWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGI---- 272
             R  +Y  +   +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I    
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 273 LDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPG 332
           L S + +N    LEKR+V+ +HE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 333 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG-RRGLSQSSLRQK 390
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L +LV M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

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BLAST of Csa1G600890 vs. TrEMBL
Match: A0A0A0LWZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600890 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 5.0e-233
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
           MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
           RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 398

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BLAST of Csa1G600890 vs. TrEMBL
Match: V7BLV2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G083700g PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 1.9e-152
Identity = 271/384 (70.57%), Postives = 312/384 (81.25%), Query Frame = 1 

Query: 6   FRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRN 65
           F  I E     +M VR K TS+QYVASR RDPTFEKLMD YK+ LKV++IQDLILANPRN
Sbjct: 19  FVGIMEHPTRFSMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLLKVISIQDLILANPRN 78

Query: 66  QSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEAD 125
            SVS+DFLS+LSQKLHLNRG  +FLRK+PHIFHI+YD +K  PFCKLTD A  +  +EA 
Sbjct: 79  PSVSIDFLSKLSQKLHLNRGPIAFLRKFPHIFHIYYDHSKLKPFCKLTDAALGVTRQEAV 138

Query: 126 AINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDA 185
           AINASLP VV+RLVR+LSMS S+MVPLRA++KVW+ELGLPDDFED+VIS  S VFQLCD 
Sbjct: 139 AINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDG 198

Query: 186 HEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKI 245
           HE NTH LKLVD +  N  RAAVE+WRV + CKEDC+VD  E+Q+SFK  YPPGMRL K 
Sbjct: 199 HEQNTHLLKLVDSVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKQGYPPGMRLSKN 258

Query: 246 FKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISH 305
           FKAKV+EWQ+ PY GPYE   +  K K   +A+EKRAVSIVHEF++LTVEKMVEVEKIS 
Sbjct: 259 FKAKVKEWQRLPYVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQ 318

Query: 306 FRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDL 365
           FRKWFGI+LNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCL++PNPVY  RR+LLDL
Sbjct: 319 FRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLVEPNPVYDARRRLLDL 378

Query: 366 VAMGRRGLSQSSLRQKADQIHNED 390
           V +GRRGL   + + +     NED
Sbjct: 379 VVLGRRGLPAVNSKLQDSSSCNED 402

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BLAST of Csa1G600890 vs. TrEMBL
Match: I1LM18_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G203100 PE=4 SV=2)

HSP 1 Score: 543.1 bits (1398), Expect = 2.8e-151
Identity = 265/374 (70.86%), Postives = 311/374 (83.16%), Query Frame = 1 

Query: 17  NMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRL 76
           +M +R K TS+QYVA+R RDPTFEKLMD YK+ +KV+A+QDLILANP+N SVS+DFLS+L
Sbjct: 30  SMCLRSKTTSAQYVATRFRDPTFEKLMDNYKNLVKVIAVQDLILANPKNPSVSIDFLSKL 89

Query: 77  SQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVD 136
           SQKLHLNRGA +FLRK+PHIFHI+YDP+K  PFC+LTD A  +  +EA AINASLP VV 
Sbjct: 90  SQKLHLNRGATAFLRKFPHIFHIYYDPSKLKPFCRLTDAALDVSRQEAVAINASLPDVVG 149

Query: 137 RLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLV 196
           RLVR+LSMS S+MVPLRA++KVW+ELGLPDDFED+VIS  S VFQL +AHEPNTH LKLV
Sbjct: 150 RLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLFEAHEPNTHLLKLV 209

Query: 197 DDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKC 256
           D    N FRAAVE+WRV + CKEDC+VD  E+Q++FK  YPPGMRL K FKAKV+EWQ+ 
Sbjct: 210 DGACNNGFRAAVEDWRVVECCKEDCSVDRMEMQFNFKQGYPPGMRLTKNFKAKVKEWQRL 269

Query: 257 PYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNI 316
           PY GPYE + +  K K   +ALEKRAVSIVHEF++LTVEKMVEVEKIS FR WFGI+LNI
Sbjct: 270 PYVGPYEVVGEKKKSKAGMMALEKRAVSIVHEFLSLTVEKMVEVEKISQFRNWFGIDLNI 329

Query: 317 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQS 376
           RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLI+PNP+Y  RR+LLDLV +GRRGL   
Sbjct: 330 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPIYDARRRLLDLVVLGRRGLPAV 389

Query: 377 SLRQKADQIHNEDG 391
           + + +     NE G
Sbjct: 390 NSKFQDTSGCNETG 403

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BLAST of Csa1G600890 vs. TrEMBL
Match: A0A151SZ97_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_015570 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-150
Identity = 264/373 (70.78%), Postives = 309/373 (82.84%), Query Frame = 1 

Query: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 77
           M VR K TS+QYVASR RDPTFEKLM+ YK+  KV+AIQDLILANP+N SVS+DFLS+LS
Sbjct: 1   MCVRSKTTSAQYVASRFRDPTFEKLMENYKNLFKVIAIQDLILANPKNPSVSIDFLSKLS 60

Query: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137
           QKLHLNRGA +FLRK+PHIFHI+YDP+K  PFC+LTD A  +  +EA AINASLP VV+R
Sbjct: 61  QKLHLNRGATAFLRKFPHIFHIYYDPSKLKPFCRLTDAALDVSRQEAVAINASLPVVVER 120

Query: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197
           LVR+LSMS SK+VPLRA++KVW+ELGLPDDFED++IS  S VFQLCDA E NTH LKLV 
Sbjct: 121 LVRILSMSASKVVPLRAVFKVWKELGLPDDFEDSIISANSGVFQLCDAPEANTHLLKLVG 180

Query: 198 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 257
            +  N  RAAVE+WRV + CK++C+VD  E+Q+SFKH YPPGMRL K FKAKV+EWQ+ P
Sbjct: 181 GVSSNGLRAAVEDWRVVECCKDECSVDRMEMQFSFKHGYPPGMRLSKNFKAKVKEWQRLP 240

Query: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317
           Y GPYE + +  K K   +A+EKRAVSIVHEF++LTVEKMVEVEKIS FRKW GI+LNIR
Sbjct: 241 YVGPYEVVSEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWLGIDLNIR 300

Query: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLI+PNPVY  RR+LLDLV +GRRGL   +
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYDARRRLLDLVVLGRRGLPAIN 360

Query: 378 LRQKADQIHNEDG 391
            + +     NE G
Sbjct: 361 SKLQDTSSCNEVG 373

[Close]
BLAST of Csa1G600890 vs. TrEMBL
Match: A0A061E4G2_THECC (Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_008927 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 268/371 (72.24%), Postives = 309/371 (83.29%), Query Frame = 1 

Query: 6   FRSIAERYHHLNMF-VRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPR 65
           F+S+ ++ +   +  +R K +S+QYVASRARDPTFEKLMDKYK  LKV+AIQDLILANP 
Sbjct: 6   FKSLLKQLNPCQIIGIRSKTSSAQYVASRARDPTFEKLMDKYKSLLKVIAIQDLILANPT 65

Query: 66  NQ--SVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSE 125
           N   SVSLDFLSRLSQ LHLNRGA SFLRKYPHIFHIFYDPNKS PFC+LTD A  I  +
Sbjct: 66  NNPPSVSLDFLSRLSQNLHLNRGAVSFLRKYPHIFHIFYDPNKSQPFCRLTDAAIDISRQ 125

Query: 126 EADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQL 185
           EADAI++SL   VD LVRLLSMS +K +PLRA++KVWRELGLPDDFED+VI++ SH+F+L
Sbjct: 126 EADAISSSLIVAVDHLVRLLSMSTTKSLPLRAVFKVWRELGLPDDFEDSVIARNSHIFRL 185

Query: 186 CDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRL 245
            DA EPNTH LKLVD++    F A+VE WRV + CKEDC+VD TEIQY FKH YPPGMRL
Sbjct: 186 SDADEPNTHILKLVDEMHDKSFVASVENWRVMECCKEDCSVDRTEIQYGFKHGYPPGMRL 245

Query: 246 RKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEK 305
            K+FKAKV+EWQ+ PY GPYE I +  + K   + LEKRAV+IVHEF++LTVE+MVEVE 
Sbjct: 246 SKVFKAKVKEWQRLPYVGPYEEIGEKKRTKTGIMGLEKRAVAIVHEFLSLTVERMVEVET 305

Query: 306 ISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKL 365
           ISHFRK F I+LNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERG LIDPNPVY VRRKL
Sbjct: 306 ISHFRKSFAIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGHLIDPNPVYNVRRKL 365

Query: 366 LDLVAMGRRGL 374
           LDLV +GRRG+
Sbjct: 366 LDLVMLGRRGM 376

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BLAST of Csa1G600890 vs. TAIR10
Match: AT1G06440.1 (AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 511.5 bits (1316), Expect = 4.6e-145
Identity = 258/369 (69.92%), Postives = 300/369 (81.30%), Query Frame = 1 

Query: 20  VRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQ--SVSLDFLSRLS 79
           VR   TS+QYVASR+RDP FEKLMDKYK+ LKV+AIQDL LANP     S+S++FLSRLS
Sbjct: 21  VRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLS 80

Query: 80  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 139
           QKLHLNRGA SFLRKYPHIFH+ YDP K+ PFC+LTD A +I  +EA AI A+L  VVDR
Sbjct: 81  QKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDR 140

Query: 140 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLV- 199
           LVRLLSMS SK +PLRA++KVWRELGLPDDFED+VISK  H+F+L D HE NTH L+LV 
Sbjct: 141 LVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQ 200

Query: 200 DDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKC 259
           ++  R +F AAVE+WRV +  KEDC+VD TEIQ+SFKHSYPPGMRL K FKAKV+EWQ+ 
Sbjct: 201 EEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRL 260

Query: 260 PYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNI 319
           PY GPYE ++   K ++  + +EKRAV+I HEF+ LTVEKMVEVEKISHFRK FGI+LNI
Sbjct: 261 PYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 320

Query: 320 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRR-GLSQ 379
           RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY  RRKLLDLV +GR   LS+
Sbjct: 321 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAALSE 380

Query: 380 SSLRQKADQ 385
           S     ++Q
Sbjct: 381 SGNTSMSEQ 389

[Close]
BLAST of Csa1G600890 vs. TAIR10
Match: AT5G45790.2 (AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-68
Identity = 138/358 (38.55%), Postives = 208/358 (58.10%), Query Frame = 1 

Query: 32  SRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLR 91
           +R RD   +K++ + +    ++ I  L+ +  R   VSL  +SR    + LN    +F+ 
Sbjct: 67  NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126

Query: 92  KYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVP 151
           KYPH F IF  P      CK+T+    +  EE + +       V R+ +LL +S   ++ 
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186

Query: 152 LRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEW 211
           + A+  + +ELGLP+DF D++++KYS  F+L D        L+LVD    +   A VEEW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVAKVEEW 246

Query: 212 RVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILDSNKY 271
           R  +Y ++   + + E  Y+F    P G ++ K F+ +++ WQ+ PY  PY    D  + 
Sbjct: 247 REVEYREK--WLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY----DRKEI 306

Query: 272 KNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLST 331
                  EKR V+++HE ++LTVEKMVEVE+++HFRK  GIE+N+R++ L HPGIFY+ST
Sbjct: 307 SRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366

Query: 332 KGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIHNED 390
           KG   T+FLREAY +GCLI+PNP+Y VRRK+LDLV +  R      L Q+ D+ H E+
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR--YSRMLLQREDETHREE 411

[Close]
BLAST of Csa1G600890 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-60
Identity = 135/368 (36.68%), Postives = 210/368 (57.07%), Query Frame = 1 

Query: 33  RARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLN---RGAPSF 92
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 93  LRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 152
           L K+PH+F I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 153 VPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVE 212
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 213 EWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGI---- 272
             R  +Y  +   +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I    
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 273 LDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPG 332
           L S + +N    LEKR+V+ +HE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 333 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG-RRGLSQSSLRQK 390
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L +LV M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

[Close]
BLAST of Csa1G600890 vs. TAIR10
Match: AT3G58520.1 (AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 155.6 bits (392), Expect = 6.4e-38
Identity = 118/358 (32.96%), Postives = 175/358 (48.88%), Query Frame = 1 

Query: 35  RDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYP 94
           ++   + ++D   D      ++D I  +P    ++   ++   + L L      FLR+YP
Sbjct: 37  KNKNLDHVIDTETDLKAACILKDAIKRSPTG-FLTAKSVADWQKLLGLTVPVLRFLRRYP 96

Query: 95  HIFHIF-YDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLR 154
            +FH F +    SLP  KLTDTA  + S+E     +     V+RL R+L M  SK V LR
Sbjct: 97  TLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLR 156

Query: 155 AIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRV 214
           +++ +  +LGLPD++E T++ KY   F    A   N   LKLV    R++F  +  + R 
Sbjct: 157 SLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVKW--RDEFAFSALQKR- 216

Query: 215 GQYCKEDCTVDETEIQY----------SFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYE 274
                ED  V   E +Y          +F  S+P G   +K  KA + E+QK PY  PY+
Sbjct: 217 ----NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD 276

Query: 275 GILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDH 334
              D +     S  +EKRAV+++HE ++LT+ K  +   +   R    I      LF  +
Sbjct: 277 ---DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRY 336

Query: 335 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG----RRGLSQSS 378
           PGIFYLS K K  TV L+E Y RG L+DP+P+  +R K   ++  G     RGL   S
Sbjct: 337 PGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVS 382

[Close]
BLAST of Csa1G600890 vs. TAIR10
Match: AT4G24320.1 (AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-36
Identity = 102/359 (28.41%), Postives = 179/359 (49.86%), Query Frame = 1 

Query: 36  DPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH 95
           D   ++ + + K+  +V++++D I+++P ++S+ L  LS L   ++L+  A +F +KYP 
Sbjct: 28  DHYLDEAVQREKNLKQVISLKDRIVSSP-SKSLPLSSLSLLKPLVNLHITAAAFFQKYPS 87

Query: 96  IFHIFYDPNKSLPF-CKLTDTANQIFSEEADAINASLPQ---VVDRLVRLLSMSNSKMVP 155
           +F  F  P+ S P   +LT  A  +  EE + I+ S PQ    V RL + L ++ +  +P
Sbjct: 88  VFTTF-QPSPSHPLHVRLTPQALTLHKEE-ETIHLSPPQRNVTVQRLTKFLMLTGAGSLP 147

Query: 156 LRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEW 215
           L  + +   +LGLP D+  ++I  Y   F++ +  +  T    L   I   +    V E 
Sbjct: 148 LYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTISSRRNNLPVSEM 207

Query: 216 RVGQYCKEDCTVDETEIQYSFKHSY----PPGMRLRKIFKAKVQEWQKCPYTGPYEGILD 275
                 + + T+D + ++   +  Y    P G  L K  K  V++WQ  PY  PYE    
Sbjct: 208 E-----RREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISPYENAFH 267

Query: 276 SNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIF 335
              Y + +   EK AV+++HE + L V K  E + +    ++ G  +  +   + HPGIF
Sbjct: 268 LGSYSDQA---EKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHPGIF 327

Query: 336 YLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIH 387
           Y+S K +  TV LREAY +  L++ +P+  +R + + L++   RG       +K D +H
Sbjct: 328 YMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRG-------KKRDYVH 368

[Close]
BLAST of Csa1G600890 vs. NCBI nr
Match: gi|778663434|ref|XP_011660083.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 814.7 bits (2103), Expect = 7.2e-233
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
           MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
           RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 398

[Close]
BLAST of Csa1G600890 vs. NCBI nr
Match: gi|659100390|ref|XP_008451076.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 796.2 bits (2055), Expect = 2.6e-227
Identity = 390/398 (97.99%), Postives = 394/398 (98.99%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
           MGPHIFRSI ERY HLNMFVRCKVTSSQYVASRARDPTFEKLMDKYK+FLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQ C+EDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300
           RLRKIFKAKV+EWQ+CPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLLDLVAMGRRGLSQSSLRQKADQIHNEDG FPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFPLLGNK 398

[Close]
BLAST of Csa1G600890 vs. NCBI nr
Match: gi|1021487393|ref|XP_016186644.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Arachis ipaensis])

HSP 1 Score: 561.6 bits (1446), Expect = 1.1e-156
Identity = 278/394 (70.56%), Postives = 322/394 (81.73%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHL--NMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDL 60
           MG HI + + ++ H    ++ +R K TS+QYVASR RDPTFEKLMDKYK   KV+AIQDL
Sbjct: 1   MGIHIMKILIKQKHSFGFSISIRSKTTSAQYVASRVRDPTFEKLMDKYKSLFKVIAIQDL 60

Query: 61  ILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQ 120
           ILANPRN SVS+DFLSRLSQKLHLNRGA SFLRK+PHIF I+YDP+K  PFC+LTD A  
Sbjct: 61  ILANPRNPSVSIDFLSRLSQKLHLNRGATSFLRKFPHIFQIYYDPSKLQPFCRLTDAALD 120

Query: 121 IFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSH 180
           +  +E  AINASLP VVDRLVR+LSMS SK VPLRAI+KVWRELGLPD+FED+VIS    
Sbjct: 121 VSKQEEKAINASLPMVVDRLVRILSMSASKTVPLRAIFKVWRELGLPDNFEDSVISANPS 180

Query: 181 VFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPP 240
           VF+LCDAHEPNTH LKLV+ +PRN FRAA+E+WRV + CKEDC V  TE++YSFKH YPP
Sbjct: 181 VFKLCDAHEPNTHLLKLVEGVPRNGFRAAIEDWRVVECCKEDCNV-RTELRYSFKHGYPP 240

Query: 241 GMRLRKIFKAKVQEWQKCPYTGPYEGIL-DSNKYKNTSLALEKRAVSIVHEFMTLTVEKM 300
           GM+L K FKAKV+EWQ  PY GPYE ++ +  K K   +A+EKRAVSIVHEF++LTVEKM
Sbjct: 241 GMKLGKNFKAKVKEWQTLPYVGPYEVVVGEKKKSKAALMAMEKRAVSIVHEFLSLTVEKM 300

Query: 301 VEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYT 360
           VEVEKIS FRKWFGI+ NIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLI+PNPVY 
Sbjct: 301 VEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYV 360

Query: 361 VRRKLLDLVAMGRRGLSQSSLRQKADQIHNEDGD 392
            RR+LLDLVAMGRRG S  +   + +   N+D D
Sbjct: 361 ARRRLLDLVAMGRRGRSSINSNLQDESSSNDDDD 393

[Close]
BLAST of Csa1G600890 vs. NCBI nr
Match: gi|1012025543|ref|XP_015950838.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Arachis duranensis])

HSP 1 Score: 558.5 bits (1438), Expect = 9.3e-156
Identity = 278/394 (70.56%), Postives = 324/394 (82.23%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHL--NMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDL 60
           MG HI + + ++ H    ++ +R K TS+QYVASR RDPTFEKLMDKYK   KV+AIQDL
Sbjct: 1   MGIHIMKVLIKQKHSFGFSISIRSKTTSAQYVASRVRDPTFEKLMDKYKSLFKVIAIQDL 60

Query: 61  ILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQ 120
           ILANPRN SVS+DFLSRLSQKLHLNRGA SFLRK+PHIF I+YDP+K  PFC+LTD A  
Sbjct: 61  ILANPRNPSVSIDFLSRLSQKLHLNRGATSFLRKFPHIFQIYYDPSKLQPFCRLTDAALD 120

Query: 121 IFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSH 180
           +  +E  AIN+SLP VVDRLVR+LSMS SK VPLRAI+KVWRELGLPD+FED+VIS    
Sbjct: 121 VSKQEEMAINSSLPMVVDRLVRILSMSASKTVPLRAIFKVWRELGLPDNFEDSVISANPS 180

Query: 181 VFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPP 240
           VF+LCDAHEPNTH LKLV+ +PRN FRAA+E+WRV + CKEDC V  TE+Q+SFKH YPP
Sbjct: 181 VFKLCDAHEPNTHLLKLVEGVPRNGFRAAIEDWRVVECCKEDCNV-RTELQFSFKHGYPP 240

Query: 241 GMRLRKIFKAKVQEWQKCPYTGPYE-GILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKM 300
           GM+L K FKAKV+EWQ  PY GPYE  +++  K K   +A+EKRAVSIVHEF++LTVEKM
Sbjct: 241 GMKLGKNFKAKVKEWQTLPYVGPYEVVVVEKKKSKAALMAMEKRAVSIVHEFLSLTVEKM 300

Query: 301 VEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYT 360
           VEVEKIS FRKWFGI+ NIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLI+PNPVY 
Sbjct: 301 VEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYV 360

Query: 361 VRRKLLDLVAMGRRGLS--QSSLRQKADQIHNED 390
            RR+LLDLVAMGRRG S   S+L+ ++    N+D
Sbjct: 361 ARRRLLDLVAMGRRGRSSINSNLQDESSSNDNDD 393

[Close]
BLAST of Csa1G600890 vs. NCBI nr
Match: gi|645238474|ref|XP_008225696.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 558.1 bits (1437), Expect = 1.2e-155
Identity = 282/397 (71.03%), Postives = 320/397 (80.60%), Query Frame = 1 

Query: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60
           MG    R I +  H   + VR K TSSQYVASRARDPTFEKLMDKYK+ LKV+A+QDLIL
Sbjct: 1   MGTQFTRWIMKHPHQHFLAVRLKTTSSQYVASRARDPTFEKLMDKYKNLLKVIAVQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120
           ANP N +VS+DFLSRLSQKLHLNRGA SFLRKYPHIFHI++DP KS  FC+LTD A QI 
Sbjct: 61  ANPTNPAVSIDFLSRLSQKLHLNRGAVSFLRKYPHIFHIYHDPMKSQTFCRLTDAAIQIS 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180
            EEA+ INASLP VVDRLVRLLSMS S+M+PLRAI KV RELGLPDDFED+VIS+ SH+F
Sbjct: 121 KEEAEVINASLPLVVDRLVRLLSMSRSRMLPLRAILKVGRELGLPDDFEDSVISRNSHLF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTH LKL D IP ++F AAVE WRV +YCKE C VD  EIQ+SFKH YPPGM
Sbjct: 181 QLCDAHEPNTHNLKLFDVIP-DKFTAAVENWRVEEYCKEGCNVDRAEIQFSFKHGYPPGM 240

Query: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNK-YKNTSLALEKRAVSIVHEFMTLTVEKMVE 300
           RLRK F+AKV+EWQ+ PY GPY+ + +  +  K   +A+EKRAV+ VHEF+ LTVEK VE
Sbjct: 241 RLRKNFRAKVKEWQRLPYVGPYDEVSEKKRSSKAGMMAVEKRAVATVHEFLNLTVEKTVE 300

Query: 301 VEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVR 360
           VEKISHFRKWFG +LNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLI PNPVY  R
Sbjct: 301 VEKISHFRKWFGFDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIHPNPVYHAR 360

Query: 361 RKLLDLVAMGRRGLSQSSLR-----QKADQIHNEDGD 392
           RKLLDLV +GR GL    LR     ++A+ +   DG+
Sbjct: 361 RKLLDLVVLGRHGLLTDELRSIASNKEAESLGQYDGE 396

The following BLAST results are available for this feature:
BLAST of Csa1G600890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH2.1e-5936.68Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Csa1G600890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWZ0_CUCSA5.0e-233100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600890 PE=4 SV=1[more]
V7BLV2_PHAVU1.9e-15270.57Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G083700g PE=4 SV=1[more]
I1LM18_SOYBN2.8e-15170.86Uncharacterized protein OS=Glycine max GN=GLYMA_11G203100 PE=4 SV=2[more]
A0A151SZ97_CAJCA1.4e-15070.78Uncharacterized protein OS=Cajanus cajan GN=KK1_015570 PE=4 SV=1[more]
A0A061E4G2_THECC3.1e-15072.24Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_0... [more]
BLAST of Csa1G600890 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06440.14.6e-14569.92 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G45790.22.0e-6838.55 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G33495.11.2e-6036.68 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G58520.16.4e-3832.96 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G24320.14.6e-3628.41 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of Csa1G600890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663434|ref|XP_011660083.1|7.2e-233100.00PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659100390|ref|XP_008451076.1|2.6e-22797.99PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|1021487393|ref|XP_016186644.1|1.1e-15670.56PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Arachis ipaensis][more]
gi|1012025543|ref|XP_015950838.1|9.3e-15670.56PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Arachis duranensis][more]
gi|645238474|ref|XP_008225696.1|1.2e-15571.03PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU104488cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G600890.1Csa1G600890.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU104488CU104488transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 35..370
score: 8.7E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 18..388
score: 8.2E
NoneNo IPR availablePANTHERPTHR31476:SF15SUBFAMILY NOT NAMEDcoord: 18..388
score: 8.2E