CsGy1G028900 (gene) Cucumber (Gy14) v2

NameCsGy1G028900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationChr1 : 26933171 .. 26935143 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAGTGAATACATGAAAATATGCATATTCTTTCAACAATTGTCACATTCAAATTTGTGAAACATTGTCACGAGTCTGAAAGCAGAAAGGAGAATGCTGGAGAGATCAACAATTTTGTTAAGGGAATTTGAATCCATTGGGGGAGTTGATATCTAATTACCAGTATGAAAGACCCTTTTTTAATACATAGAAATCGGAGGAATGGTATATTTTACTGCGTCTTCTTGCAGATGTGAACACCTTTCTTTCAGGGAAGGACTATCTGAAATAATTTCATTGATTGAATGAAATATCAAAGAATTGGTATCCATGGTTTCTCCTGATGATACACAGAATTGGCTTCGGATGCTGCTTATCGATCACCCTTTCACAGCCTCAAAGAAGCATTTATGGATAAACATTTCATCAACCGTTTTGTGGAAGTGATAGGATGAAGGGAATACAAGAATCTTCCCAGATAAGGCAAAAACCACAAGGGACATCCTCGATGCAGCCGTTTACAAATGGTTTCTCTTGGTGTAAAAGCATACAAGCTATTAAAAGTTTGCAACTTTTCTTTCATTATAGCAAATTGGAAAGATATTTGTATTCCTCTCGAATAAGTCCTTTTTGTATATCCTTGGATATTTCATTCAATAAATGAGATGATTTCTTATCCAAAAAATTCTCAGGGAGGATTGAAGAGCGAGCTGATTAAATTGGACGCTCCTCGCAACTTTGTAATTCGGTCTTTAAGGCAGGGAGACTTAACTGGAGAAGATGTACAACCTGATTTGGTAGTCTGAAAATGTGTTCTTTGTGATCTGCAGGTGATTATGCTCCGACCAAAGCTTAG

mRNA sequence

ATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTGATTATGCTCCGACCAAAGCTTAG

Coding sequence (CDS)

ATGTTTGTCAGATGTAAAGTAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAGATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATCTTCTATGACCCAAACAAGTCTCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAAGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTGGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGGCTCCCTGACGATTTTGAGGACACTGTGATATCGAAATACTCTCATGTTTTTCAGCTCTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAGAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTGGTCAGTATTGTAAAGAGGACTGCACTGTTGATGAGACTGAAATCCAGTATAGTTTTAAACATAGCTATCCTCCGGGTATGCGGTTGAGAAAAATCTTCAAAGCCAAGGTTCAGGAGTGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACTTGACAGTAACAAGTATAAGAACACTAGTCTAGCACTGGAAAAGCGAGCGGTTTCAATCGTTCATGAATTCATGACTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTTTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACCGTAAGGAGAAAACTCCTAGATTTAGTTGCTATGGGGCGTCGTGGTTTATCTCAGAGTAGTTTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTGATTATGCTCCGACCAAAGCTTAG

Protein sequence

MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGDYAPTKA
BLAST of CsGy1G028900 vs. NCBI nr
Match: XP_011660083.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical protein Csa_1G600890 [Cucumis sativus])

HSP 1 Score: 779.6 bits (2012), Expect = 4.8e-222
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP
Sbjct: 198 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKADQIHNEDGDFPLLGD 381
           LRQKADQIHNEDGDFPLLG+
Sbjct: 378 LRQKADQIHNEDGDFPLLGN 397

BLAST of CsGy1G028900 vs. NCBI nr
Match: XP_008451076.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 766.9 bits (1979), Expect = 3.2e-218
Identity = 373/380 (98.16%), Postives = 378/380 (99.47%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           MFVRCKVTSSQYVASRARDPTFEKLMDKYK+FLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRNQFRAAVEEWRVGQ C+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKV+EWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKADQIHNEDGDFPLLGD 381
           LRQKADQIHNEDG FPLLG+
Sbjct: 378 LRQKADQIHNEDGGFPLLGN 397

BLAST of CsGy1G028900 vs. NCBI nr
Match: XP_022157354.1 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 697.6 bits (1799), Expect = 2.4e-197
Identity = 337/377 (89.39%), Postives = 356/377 (94.43%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMDKYK+FLKVVA+QDLILANPRNQSVSLDFLSRLS
Sbjct: 18  MVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGAPSFLRKYPHIFHIFYDPNKS PFC+LTD A  IF EEADAINASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIFHEEADAINASLPQVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKM+PLRAIYKVWRELGLPDDFED+VI K+SH+FQLCDAHEPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIFQLCDAHEPNTHFLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRN FRAAVE+WRV + CKEDCT+DETEI+YSFKHS PPGMRLRK FKAKV+EWQ+CP
Sbjct: 198 DIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGMRLRKNFKAKVKEWQRCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEGI + NKY NTS+ALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLV MGRRGLS S 
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVVMGRRGLSHSG 377

Query: 361 LRQKADQIHNEDGDFPL 378
           LRQK +QI++EDGD PL
Sbjct: 378 LRQKVNQINSEDGDLPL 393

BLAST of CsGy1G028900 vs. NCBI nr
Match: XP_022988146.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022988147.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima])

HSP 1 Score: 692.2 bits (1785), Expect = 1.0e-195
Identity = 331/377 (87.80%), Postives = 352/377 (93.37%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           MFVRCK TSSQYVASRARDPTFEKLMD+YK+ LKVVA+QDLILANPRNQSVSL+FL RLS
Sbjct: 18  MFVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLLRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAINASLPQVV R
Sbjct: 78  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAINASLPQVVGR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKM+PLRAIYKVWRE GLPD+FED VISK SH+FQLCDAHEPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMLPLRAIYKVWREFGLPDNFEDCVISKNSHIFQLCDAHEPNTHFLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRN F+AAV+EWRV Q CK+ CT+DETEI+YSFKHSYPPGMRLRK FKAKV++WQ+CP
Sbjct: 198 DIPRNHFQAAVDEWRVTQCCKDGCTIDETEIKYSFKHSYPPGMRLRKTFKAKVKDWQRCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEG LDSNKY NT++ALEKRAVSI+HEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  S+
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSN 377

Query: 361 LRQKADQIHNEDGDFPL 378
           LRQK DQIHNEDGDFPL
Sbjct: 378 LRQKVDQIHNEDGDFPL 394

BLAST of CsGy1G028900 vs. NCBI nr
Match: XP_022960573.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata] >XP_022960574.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata])

HSP 1 Score: 689.1 bits (1777), Expect = 8.5e-195
Identity = 332/377 (88.06%), Postives = 350/377 (92.84%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMD+YK+ LKVVA+QDLILANPRNQSVSL+FLSRLS
Sbjct: 18  MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAINASLP VVDR
Sbjct: 78  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAINASLPLVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKM+PLRAIYKVWRELGLPD+FED VISK SH+FQLCDAHEPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAHEPNTHFLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRN FRAAV+EWRV Q CK+ CTVDETEI+YSFKHSYPPGMRLRK FKAKV+EWQ+CP
Sbjct: 198 DIPRNHFRAAVDEWRVTQCCKDGCTVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEG LD NK+ NT++ALEKR VSI+HEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGTLDGNKHGNTAIALEKRTVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  SS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 377

Query: 361 LRQKADQIHNEDGDFPL 378
           LRQK DQIH EDGDFPL
Sbjct: 378 LRQKVDQIHIEDGDFPL 394

BLAST of CsGy1G028900 vs. TAIR10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-146
Identity = 258/369 (69.92%), Postives = 302/369 (81.84%), Query Frame = 0

Query: 3   VRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQ--SVSLDFLSRLS 62
           VR   TS+QYVASR+RDP FEKLMDKYK+ LKV+AIQDL LANP     S+S++FLSRLS
Sbjct: 21  VRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLS 80

Query: 63  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 122
           QKLHLNRGA SFLRKYPHIFH+ YDP K+ PFC+LTD A +I  +EA AI A+L  VVDR
Sbjct: 81  QKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDR 140

Query: 123 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLV- 182
           LVRLLSMS SK +PLRA++KVWRELGLPDDFED+VISK  H+F+L D HE NTH L+LV 
Sbjct: 141 LVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQ 200

Query: 183 DDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKC 242
           ++  R +F AAVE+WRV +  KEDC+VD TEIQ+SFKHSYPPGMRL K FKAKV+EWQ+ 
Sbjct: 201 EEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRL 260

Query: 243 PYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNI 302
           PY GPYE ++   K ++  + +EKRAV+I HEF+ LTVEKMVEVEKISHFRK FGI+LNI
Sbjct: 261 PYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 320

Query: 303 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRR-GLSQ 362
           RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY  RRKLLDLV +GR   LS+
Sbjct: 321 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAALSE 380

Query: 363 SSLRQKADQ 368
           S     ++Q
Sbjct: 381 SGNTSMSEQ 389

BLAST of CsGy1G028900 vs. TAIR10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 261.9 bits (668), Expect = 6.1e-70
Identity = 138/358 (38.55%), Postives = 209/358 (58.38%), Query Frame = 0

Query: 15  SRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLR 74
           +R RD   +K++ + +    ++ I  L+ +  R   VSL  +SR    + LN    +F+ 
Sbjct: 67  NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126

Query: 75  KYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVP 134
           KYPH F IF  P      CK+T+    +  EE + +       V R+ +LL +S   ++ 
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186

Query: 135 LRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEW 194
           + A+  + +ELGLP+DF D++++KYS  F+L D        L+LVD    +   A VEEW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVAKVEEW 246

Query: 195 RVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILDSNKY 254
           R  +Y   +  + + E  Y+F    P G ++ K F+ +++ WQ+ PY  PY    D  + 
Sbjct: 247 REVEY--REKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY----DRKEI 306

Query: 255 KNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLST 314
                  EKR V+++HE ++LTVEKMVEVE+++HFRK  GIE+N+R++ L HPGIFY+ST
Sbjct: 307 SRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366

Query: 315 KGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIHNED 373
           KG   T+FLREAY +GCLI+PNP+Y VRRK+LDLV +  R      L Q+ D+ H E+
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR--YSRMLLQREDETHREE 411

BLAST of CsGy1G028900 vs. TAIR10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.6e-62
Identity = 135/368 (36.68%), Postives = 212/368 (57.61%), Query Frame = 0

Query: 16  RARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHL---NRGAPSF 75
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 76  LRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 135
           L K+PH+F I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 136 VPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVE 195
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 196 EWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGI---- 255
             R  +Y  +   +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I    
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 256 LDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPG 315
           L S + +N    LEKR+V+ +HE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 316 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG-RRGLSQSSLRQK 373
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L +LV M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

BLAST of CsGy1G028900 vs. TAIR10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 118/358 (32.96%), Postives = 177/358 (49.44%), Query Frame = 0

Query: 18  RDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYP 77
           ++   + ++D   D      ++D I  +P    ++   ++   + L L      FLR+YP
Sbjct: 37  KNKNLDHVIDTETDLKAACILKDAIKRSPTG-FLTAKSVADWQKLLGLTVPVLRFLRRYP 96

Query: 78  HIFHIF-YDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLR 137
            +FH F +    SLP  KLTDTA  + S+E     +     V+RL R+L M  SK V LR
Sbjct: 97  TLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLR 156

Query: 138 AIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRV 197
           +++ +  +LGLPD++E T++ KY   F    A   N   LKLV    R++F  +  + R 
Sbjct: 157 SLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVK--WRDEFAFSALQKR- 216

Query: 198 GQYCKEDCTVDETEIQY----------SFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYE 257
                ED  V   E +Y          +F  S+P G   +K  KA + E+QK PY  PY+
Sbjct: 217 ----NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD 276

Query: 258 GILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDH 317
              D +     S  +EKRAV+++HE ++LT+ K  +   +   R    I      LF  +
Sbjct: 277 ---DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRY 336

Query: 318 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG----RRGLSQSS 361
           PGIFYLS K K  TV L+E Y RG L+DP+P+  +R K   ++  G     RGL   S
Sbjct: 337 PGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVS 382

BLAST of CsGy1G028900 vs. TAIR10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 101/359 (28.13%), Postives = 182/359 (50.70%), Query Frame = 0

Query: 19  DPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH 78
           D   ++ + + K+  +V++++D I+++P ++S+ L  LS L   ++L+  A +F +KYP 
Sbjct: 28  DHYLDEAVQREKNLKQVISLKDRIVSSP-SKSLPLSSLSLLKPLVNLHITAAAFFQKYPS 87

Query: 79  IFHIFYDPNKSLPF-CKLTDTANQIFSEEADAINASLPQ---VVDRLVRLLSMSNSKMVP 138
           +F  F  P+ S P   +LT  A  +  EE + I+ S PQ    V RL + L ++ +  +P
Sbjct: 88  VFTTF-QPSPSHPLHVRLTPQALTLHKEE-ETIHLSPPQRNVTVQRLTKFLMLTGAGSLP 147

Query: 139 LRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVEEW 198
           L  + +   +LGLP D+  ++I  Y   F++ +  +  T    L   I   +    V E 
Sbjct: 148 LYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTISSRRNNLPVSEM 207

Query: 199 RVGQYCKEDCTVDETEI----QYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILD 258
                 + + T+D + +    +  +  ++P G  L K  K  V++WQ  PY  PYE    
Sbjct: 208 E-----RREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISPYENAFH 267

Query: 259 SNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIF 318
              Y + +   EK AV+++HE + L V K  E + +    ++ G  +  +   + HPGIF
Sbjct: 268 LGSYSDQA---EKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHPGIF 327

Query: 319 YLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSLRQKADQIH 370
           Y+S K +  TV LREAY +  L++ +P+  +R + + L++   RG       +K D +H
Sbjct: 328 YMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRG-------KKRDYVH 368

BLAST of CsGy1G028900 vs. Swiss-Prot
Match: sp|Q689D6|RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 6.5e-61
Identity = 135/368 (36.68%), Postives = 212/368 (57.61%), Query Frame = 0

Query: 16  RARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHL---NRGAPSF 75
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 76  LRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 135
           L K+PH+F I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 136 VPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDIPRNQFRAAVE 195
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 196 EWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGI---- 255
             R  +Y  +   +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I    
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 256 LDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPG 315
           L S + +N    LEKR+V+ +HE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 LRSMEAQN---RLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 316 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMG-RRGLSQSSLRQK 373
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L +LV M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

BLAST of CsGy1G028900 vs. Swiss-Prot
Match: sp|Q65XL5|WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-36
Identity = 101/364 (27.75%), Postives = 195/364 (53.57%), Query Frame = 0

Query: 10  SQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGA 69
           +Q    R ++  F+ ++ + K    V+ +++++++NP ++ +SL  L R  + L L R  
Sbjct: 57  AQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKR 116

Query: 70  P--SFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSM 129
              + L+++P +F +  +   SL F +LT  A +++ +E    N S    V +L +LL M
Sbjct: 117 RLIALLKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMM 176

Query: 130 SNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHE-PNTHYLKLVDDIPRNQ 189
           S  K + +  I  +  +LGLP +F DT+  +Y   F++      P         ++  + 
Sbjct: 177 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSA 236

Query: 190 FRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYE 249
              A EE R  +  + +  +D   ++++ +   P G++L +    +V ++++ PY  PY 
Sbjct: 237 AEVAEEENRAREEQERNLIIDR-PLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYISPYS 296

Query: 250 GILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDH 309
              D +  ++ S   EK A  +VHE ++LT+EK   V+ ++HFR+ F    ++R + + H
Sbjct: 297 ---DFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 356

Query: 310 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAM---GRRGLSQSSLRQ 368
           P +FY+S KG R +VFLREAY+   L++ + +  ++ K+  LVA+    RRG+  +S  +
Sbjct: 357 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS--E 411

BLAST of CsGy1G028900 vs. Swiss-Prot
Match: sp|A0MFS5|WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.7e-35
Identity = 105/355 (29.58%), Postives = 181/355 (50.99%), Query Frame = 0

Query: 4   RCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKL 63
           R  V   +    R ++ TF+ ++ + K    V+ I+ ++++ P ++ +SL  L +  + L
Sbjct: 66  RVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDL 125

Query: 64  HL--NRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRL 123
            L   R   + LRKYP +F I  +   SL F K+T  A +++ +E    N     +V +L
Sbjct: 126 GLKKRRRFIALLRKYPGVFEIVEEGAYSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKL 185

Query: 124 VRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDD 183
            +L+ MS  K + L  I  +  +LGLP +F DT+  +Y   F++     P    L+L   
Sbjct: 186 RKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT--PRGPALELTHW 245

Query: 184 IPRNQFRAA---VEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQK 243
            P     AA    ++ R  +  + +  +D        K   P G+ L K    K+ +++ 
Sbjct: 246 DPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVK--LPRGLNLSKSETRKISQFRD 305

Query: 244 CPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELN 303
             Y  PY+   D +  ++ +L  EK A  ++HE ++LT EK   V+ ++HFR+ F     
Sbjct: 306 MQYISPYK---DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQ 365

Query: 304 IRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGR 354
           +R + + HP +FY+S KG+R +VFLREAY    LID +P+  V+ K+  LV++ R
Sbjct: 366 LRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411

BLAST of CsGy1G028900 vs. Swiss-Prot
Match: sp|B6TTV8|WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.0e-35
Identity = 102/373 (27.35%), Postives = 190/373 (50.94%), Query Frame = 0

Query: 16  RARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAP--SFL 75
           R ++  F+ ++ + K    V+ ++++++A P ++ +SL  L R  + L L R     + L
Sbjct: 57  RRKEAPFDTVIQRDKKLKLVLKLRNILVAQP-DRVMSLRELGRFRRDLGLTRKRRLIALL 116

Query: 76  RKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMV 135
           R++P +F +  +   SL F +LT  A +++ +E    N S    V +L +LL MS  K +
Sbjct: 117 RRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRI 176

Query: 136 PLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHE-PNTHYLKLVDDIPRNQFRAAVE 195
            +  +  +  +LGLP +F DTV  +Y   F++      P         ++  +    A E
Sbjct: 177 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAELAEE 236

Query: 196 EWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYTGPYEGILDSN 255
           E R  +  + +  +D   ++++ +   P G++L +    ++  +++ PY  PY    D +
Sbjct: 237 ESRAREAEERNLIIDR-PLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISPY---ADFS 296

Query: 256 KYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYL 315
             ++ S   EK A  +VHE ++LTVEK   V+ ++HFR+ F    ++R + + HP +FY+
Sbjct: 297 HLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 356

Query: 316 STKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAM-----------GRRGLSQSSL 375
           S KG R +VFLREAY+   L++ N +  ++ K+  LVA+           G      +  
Sbjct: 357 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGS 416

BLAST of CsGy1G028900 vs. TrEMBL
Match: tr|A0A0A0LWZ0|A0A0A0LWZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 3.2e-222
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP
Sbjct: 198 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKADQIHNEDGDFPLLGD 381
           LRQKADQIHNEDGDFPLLG+
Sbjct: 378 LRQKADQIHNEDGDFPLLGN 397

BLAST of CsGy1G028900 vs. TrEMBL
Match: tr|A0A1S3BQP0|A0A1S3BQP0_CUCME (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 2.1e-218
Identity = 373/380 (98.16%), Postives = 378/380 (99.47%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           MFVRCKVTSSQYVASRARDPTFEKLMDKYK+FLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
           DIPRNQFRAAVEEWRVGQ C+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKV+EWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 257

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKADQIHNEDGDFPLLGD 381
           LRQKADQIHNEDG FPLLG+
Sbjct: 378 LRQKADQIHNEDGGFPLLGN 397

BLAST of CsGy1G028900 vs. TrEMBL
Match: tr|A0A2P4KJI1|A0A2P4KJI1_QUESU (Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_58933 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 2.3e-156
Identity = 266/356 (74.72%), Postives = 308/356 (86.52%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           M +R K TSSQYVA+RARDP FEKLMDKYK  +KV+AIQDLILANP+N  VSL+FLSRLS
Sbjct: 1   MAIRLKTTSSQYVAARARDPVFEKLMDKYKHLVKVIAIQDLILANPKNPYVSLEFLSRLS 60

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHI+YDPNKS PFC+LTD A +I  +EA+AINASLP VVDR
Sbjct: 61  QKLHLNRGATSFLRKYPHIFHIYYDPNKSQPFCRLTDAAIEISCQEAEAINASLPLVVDR 120

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           LVRLLS+S+SKM+PLR I+KVWRELGLPDDFE++VI++ S +FQLCDAHEPNTH+LKLVD
Sbjct: 121 LVRLLSLSSSKMLPLRGIFKVWRELGLPDDFEESVITRNSDLFQLCDAHEPNTHFLKLVD 180

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
               N F AAVE WR+ + CK+DC+VD  E++YSFKH YPP M+L K F+AKV+EWQ  P
Sbjct: 181 GSCINHFTAAVENWRLLECCKQDCSVDRMEMRYSFKHGYPPCMKLSKSFRAKVKEWQSLP 240

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           Y GPYE I +  + K   +A+EKRAV+I+HEF++LTVEKMVEVEKISHFRKWFGI+LNIR
Sbjct: 241 YVGPYEEIREKKRSKFGMMAMEKRAVAIIHEFLSLTVEKMVEVEKISHFRKWFGIDLNIR 300

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGL 357
           DLFLDHPGIFYLSTKGKRHT+FLREAYERGCLI+PNPVY  RRKLLDLV +GR GL
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTIFLREAYERGCLIEPNPVYDARRKLLDLVVLGRHGL 356

BLAST of CsGy1G028900 vs. TrEMBL
Match: tr|A0A2I4E090|A0A2I4E090_9ROSI (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Juglans regia OX=51240 GN=LOC108985102 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 7.5e-155
Identity = 267/356 (75.00%), Postives = 306/356 (85.96%), Query Frame = 0

Query: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 60
           M VR KVTSSQYVASRARDP FEKLMDKYK  +KV+AIQDLILANP+N+ VSLDFLSRLS
Sbjct: 20  MGVRSKVTSSQYVASRARDPVFEKLMDKYKHLVKVIAIQDLILANPKNECVSLDFLSRLS 79

Query: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120
           Q+LHLNRGAP+FLRKYPHIFHIFY+P KS PFC+LTD A +I   EA+ INASLP VVDR
Sbjct: 80  QRLHLNRGAPAFLRKYPHIFHIFYNPTKSQPFCRLTDAAFEISCLEAEVINASLPLVVDR 139

Query: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180
           L+RLLSM  SKM+PLRAI+KVWRELGLPDDFED+VI++ SH+FQLCDAHEP+TH LKL D
Sbjct: 140 LLRLLSMCQSKMLPLRAIFKVWRELGLPDDFEDSVIARNSHLFQLCDAHEPSTHILKLAD 199

Query: 181 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 240
             P  ++ AAVE WRVG+ CK+DC+VD  E++YSFKH YPPGM+L K F+ KV++WQ+ P
Sbjct: 200 VSPSCRYVAAVENWRVGECCKQDCSVDRMELRYSFKHGYPPGMKLSKNFRTKVKQWQRLP 259

Query: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300
           Y GPYE  +   + K   + LEKRAV+IVHEF++LTVEKMVEVEKISHFRKWFGI+LNIR
Sbjct: 260 YVGPYEE-MGEERAKAGMMTLEKRAVAIVHEFLSLTVEKMVEVEKISHFRKWFGIDLNIR 319

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGL 357
           DLFLDHPGIFYLSTKGK HTVFLREAYERGCLI+ NPVY  RR LLDLVA+GRRGL
Sbjct: 320 DLFLDHPGIFYLSTKGKSHTVFLREAYERGCLIERNPVYNARRMLLDLVALGRRGL 374

BLAST of CsGy1G028900 vs. TrEMBL
Match: tr|A0A251PLL7|A0A251PLL7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G102100 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 9.7e-155
Identity = 276/378 (73.02%), Postives = 312/378 (82.54%), Query Frame = 0

Query: 3   VRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLSQK 62
           VR K TSSQYVASRARDPTFEKLMDKYK+ LKV+A+QDLILANP N +VSLDFLSRLSQK
Sbjct: 11  VRLKTTSSQYVASRARDPTFEKLMDKYKNLLKVIAVQDLILANPINPAVSLDFLSRLSQK 70

Query: 63  LHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLV 122
           LHLNRGA +FLRKYPHIFHI++DP KS  FC+LTD A QI  EEA+ INASLP VVDRLV
Sbjct: 71  LHLNRGAVAFLRKYPHIFHIYHDPMKSQTFCRLTDAAIQISKEEAEVINASLPLVVDRLV 130

Query: 123 RLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVDDI 182
           RLLSMS S+M+PLRAI KV RELGLPDDFED+VIS+ SH+FQLCDAHEPNTH LKL D I
Sbjct: 131 RLLSMSRSRMLPLRAILKVGRELGLPDDFEDSVISRNSHLFQLCDAHEPNTHNLKLFDVI 190

Query: 183 PRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCPYT 242
           P  +F AAVE WRV ++CKE C VD  EIQ+SFKH YPPGMRLRK F+AKV+EWQ+ PY 
Sbjct: 191 P-EKFTAAVENWRVEEFCKEGCNVDRAEIQFSFKHGYPPGMRLRKNFRAKVKEWQRLPYV 250

Query: 243 GPYEGILDSNK-YKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIRD 302
           GPY+ + +  +  K   +A+EKRAV+ VHEF+ LTVEK VEVEKISHFRKWFG +LNIRD
Sbjct: 251 GPYDELSEKKRSSKAGMMAVEKRAVATVHEFLNLTVEKTVEVEKISHFRKWFGFDLNIRD 310

Query: 303 LFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSSL 362
           LFLDHPG+FYLSTKGKRHTVFLREAYERGCLI PNPVY  RRKLLDLV +GR GL    L
Sbjct: 311 LFLDHPGMFYLSTKGKRHTVFLREAYERGCLIHPNPVYHARRKLLDLVVLGRHGLLTDEL 370

Query: 363 R-----QKADQIHNEDGD 375
           R     +KA+ +   DG+
Sbjct: 371 RSIASNKKAESLGQYDGE 387

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011660083.14.8e-22299.74PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hyp... [more]
XP_008451076.13.2e-21898.16PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
XP_022157354.12.4e-19789.39LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia][more]
XP_022988146.11.0e-19587.80protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022988147.1 protein R... [more]
XP_022960573.18.5e-19588.06protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata] >XP_022960574.1 protein... [more]
Match NameE-valueIdentityDescription
AT1G06440.11.1e-14669.92Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G45790.26.1e-7038.55Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G33495.13.6e-6236.68Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G58520.11.9e-3932.96Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G24320.11.1e-3728.13Ubiquitin carboxyl-terminal hydrolase family protein[more]
Match NameE-valueIdentityDescription
sp|Q689D6|RPD1_ARATH6.5e-6136.68Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
sp|Q65XL5|WTF1_ORYSJ1.9e-3627.75Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
sp|A0MFS5|WTF1_ARATH4.7e-3529.58Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g0103... [more]
sp|B6TTV8|WTF1_MAIZE8.0e-3527.35Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LWZ0|A0A0A0LWZ0_CUCSA3.2e-22299.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1[more]
tr|A0A1S3BQP0|A0A1S3BQP0_CUCME2.1e-21898.16protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4... [more]
tr|A0A2P4KJI1|A0A2P4KJI1_QUESU2.3e-15674.72Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_58933 PE=... [more]
tr|A0A2I4E090|A0A2I4E090_9ROSI7.5e-15575.00protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Juglans regia OX=51240 GN=LOC108985102 PE... [more]
tr|A0A251PLL7|A0A251PLL7_PRUPE9.7e-15573.02Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G102100 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G028900.1CsGy1G028900.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 18..353
e-value: 5.3E-113
score: 377.2
NoneNo IPR availablePANTHERPTHR31476:SF32SUBFAMILY NOT NAMEDcoord: 3..359
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 3..359