Carg06146 (gene) Silver-seed gourd

NameCarg06146
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationCucurbita_argyrosperma_scaffold_026 : 1340781 .. 1341923 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAGGTACAAAAATCTTCTAAAAGTGGTTGCTGTCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCGGTATCTCTAGAATTCCTCTCGAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTGCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAACAAGACTCAACCATTTTGCAAATTAACAGATACTGCCATCCATATAGTTTGTGAAGAAGCAGATGCTATCCATGCTTCATTGCCTCAGGTTGTTGACAGATTAGTCCGGCTTTTATCAATGGCGAATTCTAAGATGTTACCACTGCGTGCAATTTACAAGGTATGGAGGGAGCTTGGCCTCCCTGACAATTTTGAGGACTGCGTGATATCGAAAAACTCTCATATTTTTCAGCTTTGTGATGCGTATGAACCAAATACTCATTTTTTGAAGTTGGTTGATGACATTCCGAGAAATCATTTCCGCGCAGCTGTCGATGAATGGAGAGTTACTCAGTGTTGTAAAGACGGATATTCTGTTGACGAGACAGAAATCAAGTATAGCTTTAAACATAGCTATCCTCCGGGGATGCGGTTGAGAAAAACCTTCAAGGCCAAGGTTAAGGAATGGCAAAGGTGTCCATATACCGGACCATACGAGGGAACACTCGACAGTAACAAGTATGGGAACACTGCTATAGCACTGGAAAAACGAGCAGTTTCAATTATTCACGAATTCATGACTTTGACTGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATGTAAGAGATCTATTCTTGGACCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTCTTTCTAAGAGAAGCTTATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTAGATTTTGTTGATATGGGGCGTCGTGGTTTACCTCCTAGCAGCTTAAGACAGAAGGTAGATCAAATTCACAATGAAGATGGTGACTTTCCTTTAGGTAACAAATGA

mRNA sequence

ATGGTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAGGTACAAAAATCTTCTAAAAGTGGTTGCTGTCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCGGTATCTCTAGAATTCCTCTCGAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTGCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAACAAGACTCAACCATTTTGCAAATTAACAGATACTGCCATCCATATAGTTTGTGAAGAAGCAGATGCTATCCATGCTTCATTGCCTCAGGTTGTTGACAGATTAGTCCGGCTTTTATCAATGGCGAATTCTAAGATGTTACCACTGCGTGCAATTTACAAGGTATGGAGGGAGCTTGGCCTCCCTGACAATTTTGAGGACTGCGTGATATCGAAAAACTCTCATATTTTTCAGCTTTGTGATGCGTATGAACCAAATACTCATTTTTTGAAGTTGGTTGATGACATTCCGAGAAATCATTTCCGCGCAGCTGTCGATGAATGGAGAGTTACTCAGTGTTGTAAAGACGGATATTCTGTTGACGAGACAGAAATCAAGTATAGCTTTAAACATAGCTATCCTCCGGGGATGCGGTTGAGAAAAACCTTCAAGGCCAAGGTTAAGGAATGGCAAAGGTGTCCATATACCGGACCATACGAGGGAACACTCGACAGTAACAAGTATGGGAACACTGCTATAGCACTGGAAAAACGAGCAGTTTCAATTATTCACGAATTCATGACTTTGACTGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATGTAAGAGATCTATTCTTGGACCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTCTTTCTAAGAGAAGCTTATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTAGATTTTGTTGATATGGGGCGTCGTGGTTTACCTCCTAGCAGCTTAAGACAGAAGGTAGATCAAATTCACAATGAAGATGGTGACTTTCCTTTAGGTAACAAATGA

Coding sequence (CDS)

ATGGTTGTTAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAGGTACAAAAATCTTCTAAAAGTGGTTGCTGTCCAAGATCTTATCCTTGCTAATCCGAGGAATCAATCGGTATCTCTAGAATTCCTCTCGAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTGCCTCCTTCCTTCGCAAATACCCTCATATTTTTCACATATTCTATGATCCAAACAAGACTCAACCATTTTGCAAATTAACAGATACTGCCATCCATATAGTTTGTGAAGAAGCAGATGCTATCCATGCTTCATTGCCTCAGGTTGTTGACAGATTAGTCCGGCTTTTATCAATGGCGAATTCTAAGATGTTACCACTGCGTGCAATTTACAAGGTATGGAGGGAGCTTGGCCTCCCTGACAATTTTGAGGACTGCGTGATATCGAAAAACTCTCATATTTTTCAGCTTTGTGATGCGTATGAACCAAATACTCATTTTTTGAAGTTGGTTGATGACATTCCGAGAAATCATTTCCGCGCAGCTGTCGATGAATGGAGAGTTACTCAGTGTTGTAAAGACGGATATTCTGTTGACGAGACAGAAATCAAGTATAGCTTTAAACATAGCTATCCTCCGGGGATGCGGTTGAGAAAAACCTTCAAGGCCAAGGTTAAGGAATGGCAAAGGTGTCCATATACCGGACCATACGAGGGAACACTCGACAGTAACAAGTATGGGAACACTGCTATAGCACTGGAAAAACGAGCAGTTTCAATTATTCACGAATTCATGACTTTGACTGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATGTAAGAGATCTATTCTTGGACCATCCTGGGATATTTTATTTATCAACCAAGGGAAAGAGACATACCGTCTTTCTAAGAGAAGCTTATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTAGATTTTGTTGATATGGGGCGTCGTGGTTTACCTCCTAGCAGCTTAAGACAGAAGGTAGATCAAATTCACAATGAAGATGGTGACTTTCCTTTAGGTAACAAATGA

Protein sequence

MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSSLRQKVDQIHNEDGDFPLGNK
BLAST of Carg06146 vs. NCBI nr
Match: XP_023516230.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 788.9 bits (2036), Expect = 7.8e-225
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS
Sbjct: 18  MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR
Sbjct: 78  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD
Sbjct: 138 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP
Sbjct: 198 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR
Sbjct: 258 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 377

Query: 361 LRQKVDQIHNEDGDFPLGNK 381
           LRQKVDQIHNEDGDFPLGNK
Sbjct: 378 LRQKVDQIHNEDGDFPLGNK 397

BLAST of Carg06146 vs. NCBI nr
Match: XP_022960573.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata] >XP_022960574.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata])

HSP 1 Score: 764.2 bits (1972), Expect = 2.1e-217
Identity = 368/380 (96.84%), Postives = 374/380 (98.42%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS
Sbjct: 18  MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAI+ASLP VVDR
Sbjct: 78  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAINASLPLVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDA+EPNTHFLKLVD
Sbjct: 138 LVRLLSMSNSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAHEPNTHFLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRNHFRAAVDEWRVTQCCKDG +VDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP
Sbjct: 198 DIPRNHFRAAVDEWRVTQCCKDGCTVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEGTLD NK+GNTAIALEKR VSIIHEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGTLDGNKHGNTAIALEKRTVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 377

Query: 361 LRQKVDQIHNEDGDFPLGNK 381
           LRQKVDQIH EDGDFPL NK
Sbjct: 378 LRQKVDQIHIEDGDFPLDNK 397

BLAST of Carg06146 vs. NCBI nr
Match: XP_022988146.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022988147.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima])

HSP 1 Score: 762.7 bits (1968), Expect = 6.0e-217
Identity = 365/380 (96.05%), Postives = 374/380 (98.42%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFL RLS
Sbjct: 18  MFVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLLRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAI+ASLPQVV R
Sbjct: 78  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAINASLPQVVGR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKMLPLRAIYKVWRE GLPDNFEDCVISKNSHIFQLCDA+EPNTHFLKLVD
Sbjct: 138 LVRLLSMSNSKMLPLRAIYKVWREFGLPDNFEDCVISKNSHIFQLCDAHEPNTHFLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRNHF+AAVDEWRVTQCCKDG ++DETEIKYSFKHSYPPGMRLRKTFKAKVK+WQRCP
Sbjct: 198 DIPRNHFQAAVDEWRVTQCCKDGCTIDETEIKYSFKHSYPPGMRLRKTFKAKVKDWQRCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPS+
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSN 377

Query: 361 LRQKVDQIHNEDGDFPLGNK 381
           LRQKVDQIHNEDGDFPL NK
Sbjct: 378 LRQKVDQIHNEDGDFPLDNK 397

BLAST of Carg06146 vs. NCBI nr
Match: XP_008451076.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 694.1 bits (1790), Expect = 2.6e-196
Identity = 335/381 (87.93%), Postives = 356/381 (93.44%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMD+YKN LKVVA+QDLILANPRNQSVSL+FLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAI+ASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKM+PLRAIYKVWRELGLPD+FED VISK SH+FQLCDA+EPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRN FRAAV+EWRV QCC++  +VDETEI+YSFKHSYPPGMRLRK FKAKVKEWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEG LDSNKY NT++ALEKRAVSI+HEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  SS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKVDQIHNEDGDFP-LGNK 381
           LRQK DQIHNEDG FP LGNK
Sbjct: 378 LRQKADQIHNEDGGFPLLGNK 398

BLAST of Carg06146 vs. NCBI nr
Match: XP_011660083.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical protein Csa_1G600890 [Cucumis sativus])

HSP 1 Score: 691.0 bits (1782), Expect = 2.2e-195
Identity = 334/381 (87.66%), Postives = 356/381 (93.44%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMD+YK+ LKVVA+QDLILANPRNQSVSL+FLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAI+ASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKM+PLRAIYKVWRELGLPD+FED VISK SH+FQLCDA+EPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRN FRAAV+EWRV Q CK+  +VDETEI+YSFKHSYPPGMRLRK FKAKV+EWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEG LDSNKY NT++ALEKRAVSI+HEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  SS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKVDQIHNEDGDFP-LGNK 381
           LRQK DQIHNEDGDFP LGNK
Sbjct: 378 LRQKADQIHNEDGDFPLLGNK 398

BLAST of Carg06146 vs. TAIR10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 514.6 bits (1324), Expect = 5.1e-146
Identity = 253/354 (71.47%), Postives = 294/354 (83.05%), Query Frame = 0

Query: 3   VRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQ--SVSLEFLSRLS 62
           VR  TTS+QYVASR+RDP FEKLMD+YKNLLKV+A+QDL LANP     S+S+EFLSRLS
Sbjct: 21  VRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLS 80

Query: 63  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 122
           QKLHLNRGAASFLRKYPHIFH+ YDP K +PFC+LTD A+ I  +EA AI A+L  VVDR
Sbjct: 81  QKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDR 140

Query: 123 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLV- 182
           LVRLLSM+ SK +PLRA++KVWRELGLPD+FED VISKN H+F+L D +E NTH L+LV 
Sbjct: 141 LVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQ 200

Query: 183 DDIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRC 242
           ++  R  F AAV++WRV +C K+  SVD TEI++SFKHSYPPGMRL KTFKAKVKEWQR 
Sbjct: 201 EEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRL 260

Query: 243 PYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNV 302
           PY GPYE  +   K  +  + +EKRAV+I HEF+ LTVEKMVEVEKISHFRK FGI+LN+
Sbjct: 261 PYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 320

Query: 303 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGR 354
           RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY  RRKLLD V +GR
Sbjct: 321 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374

BLAST of Carg06146 vs. TAIR10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 255.4 bits (651), Expect = 5.6e-68
Identity = 139/358 (38.83%), Postives = 208/358 (58.10%), Query Frame = 0

Query: 15  SRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHLNRGAASFLR 74
           +R RD   +K++ + + L  ++ +  L+ +  R   VSL+ +SR    + LN    +F+ 
Sbjct: 67  NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126

Query: 75  KYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKMLP 134
           KYPH F IF  P      CK+T+    ++ EE + +       V R+ +LL ++   +L 
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186

Query: 135 LRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVDEW 194
           + A+  + +ELGLP++F D +++K S  F+L D        L+LVD    +   A V+EW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVD-----LETLELVDRDDESLCVAKVEEW 246

Query: 195 RVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSNKY 254
           R  +  +   S  ET   Y+F    P G ++ K F+ ++K WQR PY  PY    D  + 
Sbjct: 247 REVEYREKWLSKFET--NYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY----DRKEI 306

Query: 255 GNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLST 314
                  EKR V++IHE ++LTVEKMVEVE+++HFRK  GIE+NVR++ L HPGIFY+ST
Sbjct: 307 SRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366

Query: 315 KGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSSLRQKVDQIHNED 373
           KG   T+FLREAY +GCLI+PNP+Y VRRK+LD V +  R      L Q+ D+ H E+
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR--YSRMLLQREDETHREE 411

BLAST of Carg06146 vs. TAIR10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-58
Identity = 130/368 (35.33%), Postives = 210/368 (57.07%), Query Frame = 0

Query: 16  RARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHL---NRGAASF 75
           R RD  ++  M+  K + KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 76  LRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKM 135
           L K+PH+F I+  P +   +C+LT  A+  +  E +A+   +P  V RL +L+ M+N+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 136 LPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVD 195
           + L  +     E GLP++FE  VI K+   F+L D  E    ++++V+  P N    A++
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 196 EWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSN 255
             R  +    G  +D  ++++SF  ++PPG ++ K F+  V +WQR PY  PYE   D +
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE---DIS 285

Query: 256 KYGNTAI----ALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 315
            Y   ++     LEKR+V+ IHE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 GYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 316 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMG-RRGLPPSSLRQK 373
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L + V M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

BLAST of Carg06146 vs. TAIR10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-39
Identity = 108/356 (30.34%), Postives = 179/356 (50.28%), Query Frame = 0

Query: 19  DPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYPH 78
           D   ++ + R KNL +V++++D I+++P ++S+ L  LS L   ++L+  AA+F +KYP 
Sbjct: 28  DHYLDEAVQREKNLKQVISLKDRIVSSP-SKSLPLSSLSLLKPLVNLHITAAAFFQKYPS 87

Query: 79  IFHIFYDPNKTQPF-CKLTDTAIHIVCEEADAIHASLPQ---VVDRLVRLLSMANSKMLP 138
           +F  F  P+ + P   +LT  A+ +  EE + IH S PQ    V RL + L +  +  LP
Sbjct: 88  VFTTF-QPSPSHPLHVRLTPQALTLHKEE-ETIHLSPPQRNVTVQRLTKFLMLTGAGSLP 147

Query: 139 LRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVDEW 198
           L  + +   +LGLP ++   +I      F++ +  +  T    L   I        V E 
Sbjct: 148 LYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTISSRRNNLPVSEM 207

Query: 199 RVTQCCKDGYSVDE-TEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSNK 258
              +   DG  V +   I+YS   ++P G  L K  K  V++WQ  PY  PYE       
Sbjct: 208 ERREATIDGSRVKKGLRIRYSM--NFPKGYELHKRVKNWVEQWQNLPYISPYENAFHLGS 267

Query: 259 YGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYLS 318
           Y + A   EK AV+++HE + L V K  E + +    ++ G  +  +   + HPGIFY+S
Sbjct: 268 YSDQA---EKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHPGIFYMS 327

Query: 319 TKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSSLRQKVDQIH 370
            K +  TV LREAY +  L++ +P+  +R + +  +    RG       +K D +H
Sbjct: 328 HKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRG-------KKRDYVH 368

BLAST of Carg06146 vs. TAIR10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-35
Identity = 105/341 (30.79%), Postives = 167/341 (48.97%), Query Frame = 0

Query: 18  RDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHLNRGAASFLRKYP 77
           ++   + ++D   +L     ++D I  +P    ++ + ++   + L L      FLR+YP
Sbjct: 37  KNKNLDHVIDTETDLKAACILKDAIKRSPTG-FLTAKSVADWQKLLGLTVPVLRFLRRYP 96

Query: 78  HIFHIF-YDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKMLPLR 137
            +FH F +    + P  KLTDTA+ +  +E     +     V+RL R+L M  SK + LR
Sbjct: 97  TLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLR 156

Query: 138 AIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVDEWRV 197
           +++ +  +LGLPDN+E  ++ K    F    A   N   LKLV    R+ F  +  + R 
Sbjct: 157 SLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVK--WRDEFAFSALQKRN 216

Query: 198 TQCCKDGYSVDETEIK-----YSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDS 257
                 G      E K      +F  S+P G   +K  KA + E+Q+ PY  PY+   D 
Sbjct: 217 EDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD---DP 276

Query: 258 NKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFY 317
           +     +  +EKRAV+++HE ++LT+ K  +   +   R    I      LF  +PGIFY
Sbjct: 277 SNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFY 336

Query: 318 LSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMG 353
           LS K K  TV L+E Y RG L+DP+P+  +R K    +  G
Sbjct: 337 LSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTG 370

BLAST of Carg06146 vs. Swiss-Prot
Match: sp|Q689D6|RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-57
Identity = 130/368 (35.33%), Postives = 210/368 (57.07%), Query Frame = 0

Query: 16  RARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHL---NRGAASF 75
           R RD  ++  M+  K + KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 76  LRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKM 135
           L K+PH+F I+  P +   +C+LT  A+  +  E +A+   +P  V RL +L+ M+N+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 136 LPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAAVD 195
           + L  +     E GLP++FE  VI K+   F+L D  E    ++++V+  P N    A++
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 196 EWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSN 255
             R  +    G  +D  ++++SF  ++PPG ++ K F+  V +WQR PY  PYE   D +
Sbjct: 226 RVREIEYRTKG--IDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE---DIS 285

Query: 256 KYGNTAI----ALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPG 315
            Y   ++     LEKR+V+ IHE ++LTVEK + +E+I+HFR    +   +++  L H G
Sbjct: 286 GYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 345

Query: 316 IFYLSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMG-RRGLPPSSLRQK 373
           IFY+ST+   GK HTVFLRE Y+RG L++PN VY  RR+L + V M  R+    + L + 
Sbjct: 346 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRY 405

BLAST of Carg06146 vs. Swiss-Prot
Match: sp|Q65XL5|WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-31
Identity = 92/357 (25.77%), Postives = 181/357 (50.70%), Query Frame = 0

Query: 10  SQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHL--NR 69
           +Q    R ++  F+ ++ R K L  V+ +++++++NP ++ +SL  L R  + L L   R
Sbjct: 57  AQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKR 116

Query: 70  GAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSM 129
              + L+++P +F +  +   +  F +LT  A  +  +E    + S    V +L +LL M
Sbjct: 117 RLIALLKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMM 176

Query: 130 ANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYE-PNTHFLKLVDDIPRNH 189
           +  K + +  I  +  +LGLP  F D +  +    F++      P         ++  + 
Sbjct: 177 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSA 236

Query: 190 FRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYE 249
              A +E R  +  +    +D   +K++ +   P G++L +    +V +++  PY  PY 
Sbjct: 237 AEVAEEENRAREEQERNLIIDR-PLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYISPYS 296

Query: 250 GTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDH 309
              D +   + +   EK A  ++HE ++LT+EK   V+ ++HFR+ F    ++R + + H
Sbjct: 297 ---DFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 356

Query: 310 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDM---GRRGLPPSS 361
           P +FY+S KG R +VFLREAY+   L++ + +  ++ K+   V +    RRG+P +S
Sbjct: 357 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS 406

BLAST of Carg06146 vs. Swiss-Prot
Match: sp|A0MFS5|WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 98/343 (28.57%), Postives = 172/343 (50.15%), Query Frame = 0

Query: 16  RARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHL--NRGAASFL 75
           R ++ TF+ ++ R K L  V+ ++ ++++ P ++ +SL  L +  + L L   R   + L
Sbjct: 78  RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALL 137

Query: 76  RKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKML 135
           RKYP +F I  +   +  F K+T  A  +  +E    +     +V +L +L+ M+  K +
Sbjct: 138 RKYPGVFEIVEEGAYSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197

Query: 136 PLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVDDIPRNHFRAA--- 195
            L  I  +  +LGLP  F D +  +    F++     P    L+L    P     AA   
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT--PRGPALELTHWDPELAVSAAELS 257

Query: 196 VDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLD 255
            D+ R  +  +    +D    K++ +   P G+ L K+   K+ +++   Y  PY+   D
Sbjct: 258 EDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYK---D 317

Query: 256 SNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIF 315
            +   +  +  EK A  +IHE ++LT EK   V+ ++HFR+ F     +R + + HP +F
Sbjct: 318 FSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLF 377

Query: 316 YLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGR 354
           Y+S KG+R +VFLREAY    LID +P+  V+ K+   V + R
Sbjct: 378 YVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411

BLAST of Carg06146 vs. Swiss-Prot
Match: sp|B6TTV8|WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.4e-29
Identity = 89/341 (26.10%), Postives = 171/341 (50.15%), Query Frame = 0

Query: 16  RARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLSQKLHL--NRGAASFL 75
           R ++  F+ ++ R K L  V+ ++++++A P ++ +SL  L R  + L L   R   + L
Sbjct: 57  RRKEAPFDTVIQRDKKLKLVLKLRNILVAQP-DRVMSLRELGRFRRDLGLTRKRRLIALL 116

Query: 76  RKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDRLVRLLSMANSKML 135
           R++P +F +  +   +  F +LT  A  +  +E    + S    V +L +LL M+  K +
Sbjct: 117 RRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRI 176

Query: 136 PLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYE-PNTHFLKLVDDIPRNHFRAAVD 195
            +  +  +  +LGLP  F D V  +    F++      P         ++  +    A +
Sbjct: 177 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAELAEE 236

Query: 196 EWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCPYTGPYEGTLDSN 255
           E R  +  +    +D   +K++ +   P G++L +    ++  ++  PY  PY    D +
Sbjct: 237 ESRAREAEERNLIIDR-PLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISPY---ADFS 296

Query: 256 KYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVRDLFLDHPGIFYL 315
              + +   EK A  ++HE ++LTVEK   V+ ++HFR+ F    ++R + + HP +FY+
Sbjct: 297 HLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 356

Query: 316 STKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGR 354
           S KG R +VFLREAY+   L++ N +  ++ K+   V + R
Sbjct: 357 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390

BLAST of Carg06146 vs. TrEMBL
Match: tr|A0A1S3BQP0|A0A1S3BQP0_CUCME (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 1.7e-196
Identity = 335/381 (87.93%), Postives = 356/381 (93.44%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMD+YKN LKVVA+QDLILANPRNQSVSL+FLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAI+ASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKM+PLRAIYKVWRELGLPD+FED VISK SH+FQLCDA+EPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRN FRAAV+EWRV QCC++  +VDETEI+YSFKHSYPPGMRLRK FKAKVKEWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEG LDSNKY NT++ALEKRAVSI+HEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  SS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKVDQIHNEDGDFP-LGNK 381
           LRQK DQIHNEDG FP LGNK
Sbjct: 378 LRQKADQIHNEDGGFPLLGNK 398

BLAST of Carg06146 vs. TrEMBL
Match: tr|A0A0A0LWZ0|A0A0A0LWZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 1.5e-195
Identity = 334/381 (87.66%), Postives = 356/381 (93.44%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VRCK TSSQYVASRARDPTFEKLMD+YK+ LKVVA+QDLILANPRNQSVSL+FLSRLS
Sbjct: 18  MFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLILANPRNQSVSLDFLSRLS 77

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHIFYDPNK+ PFCKLTDTA  I  EEADAI+ASLPQVVDR
Sbjct: 78  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLSM+NSKM+PLRAIYKVWRELGLPD+FED VISK SH+FQLCDA+EPNTH+LKLVD
Sbjct: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 197

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
           DIPRN FRAAV+EWRV Q CK+  +VDETEI+YSFKHSYPPGMRLRK FKAKV+EWQ+CP
Sbjct: 198 DIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVQEWQKCP 257

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           YTGPYEG LDSNKY NT++ALEKRAVSI+HEFMTLTVEKMVEVEKISHFRKWFGIELN+R
Sbjct: 258 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 317

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLD V MGRRGL  SS
Sbjct: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 377

Query: 361 LRQKVDQIHNEDGDFP-LGNK 381
           LRQK DQIHNEDGDFP LGNK
Sbjct: 378 LRQKADQIHNEDGDFPLLGNK 398

BLAST of Carg06146 vs. TrEMBL
Match: tr|A0A2P4KJI1|A0A2P4KJI1_QUESU (Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_58933 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 3.2e-158
Identity = 266/356 (74.72%), Postives = 310/356 (87.08%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M +R KTTSSQYVA+RARDP FEKLMD+YK+L+KV+A+QDLILANP+N  VSLEFLSRLS
Sbjct: 1   MAIRLKTTSSQYVAARARDPVFEKLMDKYKHLVKVIAIQDLILANPKNPYVSLEFLSRLS 60

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRGA SFLRKYPHIFHI+YDPNK+QPFC+LTD AI I C+EA+AI+ASLP VVDR
Sbjct: 61  QKLHLNRGATSFLRKYPHIFHIYYDPNKSQPFCRLTDAAIEISCQEAEAINASLPLVVDR 120

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVRLLS+++SKMLPLR I+KVWRELGLPD+FE+ VI++NS +FQLCDA+EPNTHFLKLVD
Sbjct: 121 LVRLLSLSSSKMLPLRGIFKVWRELGLPDDFEESVITRNSDLFQLCDAHEPNTHFLKLVD 180

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
               NHF AAV+ WR+ +CCK   SVD  E++YSFKH YPP M+L K+F+AKVKEWQ  P
Sbjct: 181 GSCINHFTAAVENWRLLECCKQDCSVDRMEMRYSFKHGYPPCMKLSKSFRAKVKEWQSLP 240

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           Y GPYE   +  +     +A+EKRAV+IIHEF++LTVEKMVEVEKISHFRKWFGI+LN+R
Sbjct: 241 YVGPYEEIREKKRSKFGMMAMEKRAVAIIHEFLSLTVEKMVEVEKISHFRKWFGIDLNIR 300

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGL 357
           DLFLDHPGIFYLSTKGKRHT+FLREAYERGCLI+PNPVY  RRKLLD V +GR GL
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTIFLREAYERGCLIEPNPVYDARRKLLDLVVLGRHGL 356

BLAST of Carg06146 vs. TrEMBL
Match: tr|B9S735|B9S735_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1333050 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 6.9e-153
Identity = 262/358 (73.18%), Postives = 309/358 (86.31%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQ--SVSLEFLSR 60
           + VR KTTS QYVASR+RDPTFEKLM++YKNL+KV+A+QDLILANP N   SVS++FLSR
Sbjct: 18  ITVRSKTTSGQYVASRSRDPTFEKLMEKYKNLVKVIAIQDLILANPTNSPPSVSVDFLSR 77

Query: 61  LSQKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVV 120
           LSQKLHLNRGAASFLR+YPHIF+IFY+   +QPFC+LTD A+ I C+EA++I A LP VV
Sbjct: 78  LSQKLHLNRGAASFLRRYPHIFNIFYNSTLSQPFCRLTDIALQISCQEAESIKACLPVVV 137

Query: 121 DRLVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKL 180
           D LVRLLSM+ SK LPLRAI+KVWRELGLPD+FED +IS+N H+F+LCDA+EPNTH LKL
Sbjct: 138 DHLVRLLSMSTSKSLPLRAIFKVWRELGLPDDFEDSLISQNPHLFRLCDAHEPNTHILKL 197

Query: 181 VDDIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQR 240
           V++IP NHF AAVD WRVT+CCK+  SVD TEI++SFKH YPPGMR+ K F+AKVKEWQR
Sbjct: 198 VEEIPDNHFSAAVDIWRVTECCKEDCSVDRTEIQFSFKHQYPPGMRVSKNFRAKVKEWQR 257

Query: 241 CPYTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELN 300
            PY GPYE   ++ +     + LEKR+V+I+HEF++LTVEKMVEVEKISHFRK FGI+LN
Sbjct: 258 LPYIGPYEKVGENKRSKAGMMGLEKRSVAIVHEFLSLTVEKMVEVEKISHFRKSFGIDLN 317

Query: 301 VRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGL 357
           +RD+FLDHPGIFYLSTKGKRHTVFLREAYERG LIDPNPVY VRRKLLD V +GRR L
Sbjct: 318 IRDMFLDHPGIFYLSTKGKRHTVFLREAYERGHLIDPNPVYDVRRKLLDLVILGRRSL 375

BLAST of Carg06146 vs. TrEMBL
Match: tr|V7BLV2|V7BLV2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G083700g PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 9.0e-153
Identity = 260/372 (69.89%), Postives = 310/372 (83.33%), Query Frame = 0

Query: 1   MVVRCKTTSSQYVASRARDPTFEKLMDRYKNLLKVVAVQDLILANPRNQSVSLEFLSRLS 60
           M VR KTTS+QYVASR RDPTFEKLMD YKNLLKV+++QDLILANPRN SVS++FLS+LS
Sbjct: 31  MCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLLKVISIQDLILANPRNPSVSIDFLSKLS 90

Query: 61  QKLHLNRGAASFLRKYPHIFHIFYDPNKTQPFCKLTDTAIHIVCEEADAIHASLPQVVDR 120
           QKLHLNRG  +FLRK+PHIFHI+YD +K +PFCKLTD A+ +  +EA AI+ASLP VV+R
Sbjct: 91  QKLHLNRGPIAFLRKFPHIFHIYYDHSKLKPFCKLTDAALGVTRQEAVAINASLPVVVER 150

Query: 121 LVRLLSMANSKMLPLRAIYKVWRELGLPDNFEDCVISKNSHIFQLCDAYEPNTHFLKLVD 180
           LVR+LSM+ S+M+PLRA++KVW+ELGLPD+FED VIS NS +FQLCD +E NTH LKLVD
Sbjct: 151 LVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVD 210

Query: 181 DIPRNHFRAAVDEWRVTQCCKDGYSVDETEIKYSFKHSYPPGMRLRKTFKAKVKEWQRCP 240
            +  N  RAAV++WRV +CCK+  SVD  E+++SFK  YPPGMRL K FKAKVKEWQR P
Sbjct: 211 SVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKQGYPPGMRLSKNFKAKVKEWQRLP 270

Query: 241 YTGPYEGTLDSNKYGNTAIALEKRAVSIIHEFMTLTVEKMVEVEKISHFRKWFGIELNVR 300
           Y GPYE   +  K     +A+EKRAVSI+HEF++LTVEKMVEVEKIS FRKWFGI+LN+R
Sbjct: 271 YVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIR 330

Query: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDFVDMGRRGLPPSS 360
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCL++PNPVY  RR+LLD V +GRRGLP  +
Sbjct: 331 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLVEPNPVYDARRRLLDLVVLGRRGLPAVN 390

Query: 361 LRQKVDQIHNED 373
            + +     NED
Sbjct: 391 SKLQDSSSCNED 402

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023516230.17.8e-225100.00protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo][more]
XP_022960573.12.1e-21796.84protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata] >XP_022960574.1 protein... [more]
XP_022988146.16.0e-21796.05protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022988147.1 protein R... [more]
XP_008451076.12.6e-19687.93PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
XP_011660083.12.2e-19587.66PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hyp... [more]
Match NameE-valueIdentityDescription
AT1G06440.15.1e-14671.47Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G45790.25.6e-6838.83Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G33495.11.1e-5835.33Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G24320.11.4e-3930.34Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G58520.12.8e-3530.79Ubiquitin carboxyl-terminal hydrolase family protein[more]
Match NameE-valueIdentityDescription
sp|Q689D6|RPD1_ARATH1.9e-5735.33Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
sp|Q65XL5|WTF1_ORYSJ3.1e-3125.77Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
sp|A0MFS5|WTF1_ARATH1.2e-3028.57Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g0103... [more]
sp|B6TTV8|WTF1_MAIZE6.4e-2926.10Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BQP0|A0A1S3BQP0_CUCME1.7e-19687.93protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4... [more]
tr|A0A0A0LWZ0|A0A0A0LWZ0_CUCSA1.5e-19587.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1[more]
tr|A0A2P4KJI1|A0A2P4KJI1_QUESU3.2e-15874.72Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_58933 PE=... [more]
tr|B9S735|B9S735_RICCO6.9e-15373.18Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1333050 PE=4 SV=1[more]
tr|V7BLV2|V7BLV2_PHAVU9.0e-15369.89Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G083700g PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06146-RACarg06146-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 18..353
e-value: 4.1E-109
score: 364.4
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 2..355
NoneNo IPR availablePANTHERPTHR31476:SF32SUBFAMILY NOT NAMEDcoord: 2..355