Carg06128 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCTTCGTCCACAAGCTTTCAGAATATTACGCCTCAAATCAGTTTCAAATATTATCCCGGGTCTCATGTTCTTACCATCAACGTCCAAGGTTTGACATTTTCCCCTTCTTTTGTGAAAATATTAATTCATAATTATATATATATATATATATATATAATTAAAATTCACCATTTAATTTTAATATATTTTAAAAAATAACCTTCCAATTTGTTATATATTATTAAAAATAAATTAATATTATCTGGTAAACAAATATATATTTTTAAATTTAAATTTATAATTTTCATTTAAATCTTCATCATACCTTTAGATCAAATAGCTTAAATATAAAATATAAATTAAATTAAATAGTTGAAAAAACAATCCATTTTTAATTTATGAAAATTTGACTGTTAGACGATGAAAGTCTCACATCTGCCAATTTAGAGAATAATCATGGTTTTATAAACAAAGAATACTCTTCATCCGTAAGAGGCATTTTGGAGAAGCCCAAAGCAAAACCACGAGAGCTTATACTCAAAGTGGACAATATCATATCATTGTTGAGAGTCGTGTTTGTCTAACATGGTATTAGAGGCATGCCTTAAACTTAGTCGTGTTAATAGTAGATTGGTAAATCCTCAAACATCGAACAAAGGAAAGCCACCAGAGCTTATGCTACGATTGTGGAGAGTCGTGTTGGTCTGACGTTTAGAATTTTGGATTTTTTCTGCAGATTTCACGAGCAACGATCTGAAAGTTCAGGTGACATGCGCCTTAAAGTTGAGGATCAGCGGCAAACGGAGGGTGAACTGCGGCAAGTGTATCGGATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATTTTCAAGATCTCTGCCAAGGTGGAGGGAGGCATACTCTCAGTGAGGCAGCCCATGAAAGCCTCCAGTGAAGGGAGTGGATGTGGGGGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTATGGGCCATGAAAGCCTTCAGGGAAGGGAGTGGATGGTTGGGAAGAGGAGGATGGTTGAGGAGAAACATGGTGAATATGGCTCTAGGGGCTGCTGTTTTCGTCATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCATACAAACAATGA ATGGATCCTTCGTCCACAAGCTTTCAGAATATTACGCCTCAAATCAGTTTCAAATATTATCCCGGGTCTCATGTTCTTACCATCAACGTCCAAGATTTCACGAGCAACGATCTGAAAGTTCAGGTGACATGCGCCTTAAAGTTGAGGATCAGCGGCAAACGGAGGGTGAACTGCGGCAAGTGTATCGGATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATTTTCAAGATCTCTGCCAAGGTGGAGGGAGGCATACTCTCAGTGAGGCAGCCCATGAAAGCCTCCAGTGAAGGGAGTGGATGTGGGGGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTATGGGCCATGAAAGCCTTCAGGGAAGGGAGTGGATGGTTGGGAAGAGGAGGATGGTTGAGGAGAAACATGGTGAATATGGCTCTAGGGGCTGCTGTTTTCGTCATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCATACAAACAATGA ATGGATCCTTCGTCCACAAGCTTTCAGAATATTACGCCTCAAATCAGTTTCAAATATTATCCCGGGTCTCATGTTCTTACCATCAACGTCCAAGATTTCACGAGCAACGATCTGAAAGTTCAGGTGACATGCGCCTTAAAGTTGAGGATCAGCGGCAAACGGAGGGTGAACTGCGGCAAGTGTATCGGATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATTTTCAAGATCTCTGCCAAGGTGGAGGGAGGCATACTCTCAGTGAGGCAGCCCATGAAAGCCTCCAGTGAAGGGAGTGGATGTGGGGGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTATGGGCCATGAAAGCCTTCAGGGAAGGGAGTGGATGGTTGGGAAGAGGAGGATGGTTGAGGAGAAACATGGTGAATATGGCTCTAGGGGCTGCTGTTTTCGTCATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCATACAAACAATGA MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEGSGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVYLCCFCHCVSQSYKQ
BLAST of Carg06128 vs. NCBI nr
Match: XP_022960897.1 (heat shock protein beta-11-like [Cucurbita moschata]) HSP 1 Score: 172.9 bits (437), Expect = 9.1e-40 Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Carg06128 vs. NCBI nr
Match: XP_023533468.1 (uncharacterized protein LOC111795344 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.0 bits (406), Expect = 3.6e-36 Identity = 82/109 (75.23%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of Carg06128 vs. NCBI nr
Match: XP_022960894.1 (uncharacterized protein LOC111461557 [Cucurbita moschata]) HSP 1 Score: 117.5 bits (293), Expect = 4.5e-23 Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of Carg06128 vs. NCBI nr
Match: XP_023533466.1 (nucleoporin NUP159-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.5 bits (293), Expect = 4.5e-23 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of Carg06128 vs. NCBI nr
Match: XP_022960896.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata]) HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20 Identity = 64/144 (44.44%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of Carg06128 vs. TAIR10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11 Identity = 36/86 (41.86%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of Carg06128 vs. TAIR10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08 Identity = 30/86 (34.88%), Postives = 43/86 (50.00%), Query Frame = 0
BLAST of Carg06128 vs. Swiss-Prot
Match: sp|A5JV83|HSPBB_DANRE (Heat shock protein beta-11 OS=Danio rerio OX=7955 GN=hspb11 PE=2 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05 Identity = 34/102 (33.33%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Carg06128 vs. TrEMBL
Match: tr|A0A1S3BQ02|A0A1S3BQ02_CUCME (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103492434 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.0e-19 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Carg06128 vs. TrEMBL
Match: tr|A0A1S3BRB0|A0A1S3BRB0_CUCME (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucumis melo OX=3656 GN=LOC103492432 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 9.9e-19 Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Carg06128 vs. TrEMBL
Match: tr|A0A0A0LWW1|A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600100 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.4e-18 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Carg06128 vs. TrEMBL
Match: tr|A0A0A0M2E7|A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600110 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.2e-17 Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Carg06128 vs. TrEMBL
Match: tr|R0FXI8|R0FXI8_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella OX=81985 GN=CARUB_v10023885mg PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.6e-08 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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