Cla011096 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTTCTTCTTCAAAAAATTTCCAGGATTTTGAGCCTCGATTTGATTGGGTTCATCATCCCGATTCTCATGTTCTTATCGTCCACCTCTTAGGTTTGACATTTTTCCCCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTACGCCTTTTGCAGTTTCCTGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTCCCTTTTTTTTTTTTCCTAATCTTTTTTTTTTTTTTTTTTTTTTTTTAATTCCTCAAAATAATGTGGCCAAATTACAGAAATGTCCCTCAATCTAGTCGTTCTTTGAAAAAGTTCAAACTCTATGTTTTCTCTCTCAAATAAAAGTGGTTAATTATCAAACAAATTCCAAAAACAAAAACGGACTCAATTTTTAAAATATTGATTAAAAAAATAAAAAATAAAATGATAAATTTAAATGTAGAAGAAATATTTTATAGGCTTGATTTTCAAAAAAAAATTAAAAACTAAAAAGTAAATAGTAATCAACGGAGTGATTTCAAGATCTCAATTTTACTAAAATTTATATAAAAATAGAGATAAAACGTAATATTTTTGGAAAAATTAAAAAAAAAAAAAATTTACAAAAAAATTTTGATAAATAAACCTTTTATGTTTTTAAAAATGTTTGTGATTTTATTCTATTTAAATTAATGACATTTTATGCCTTACTTGTTAGTGTTTGTTTCATGATTCTTTTTAATAAAATAATAGATAATAAAAATATTGATATTTACTTTAAAATATCTTTATTTCAGAAAAAGTAACAATATTATTTATTCTATTATTATTATTATTATTATTATTGAAAGAATAGAGTGACTTTCAAACAAATTCAAATTAAAAATTTAAGGGTATATTTTTTTTATTTTATAATTTAGCCACAAAAAGGAAAAGTATAATGTGTGTGTATATATTGACTCTTTACAAATATTGCAAAATCATGTTTTGAGAAAAAAAAAAAAAAATCTATTATGAGGACTATAAGAGAGAATTTTTAGTGAGAGAATTGAAAATTTTAAAAATTGGTGAGAGAAATTACGGATTTACCTTATAACCTTGATTATAAGTTTCGAGGTGTACAATAAATTTATGATATTTCAATTTTGTGTCTTTTTCTAAATTTAAAAATAGTTAGTAAATTTACTCACTTCCAATTTTATATTTAATCCATCTATGACATATTCAAATTTTTAAAAATTAATTCTAACTTATCTGGCTAAAAAGGACACAATTTTGTATTGTGTGACTTGTACACTTGTAAACTCTAGTCTCTAAATATATTGAATACGTCAAAGTTGAAATTTTAAAAAACTATTAAACATTTTCTAATTTTATGACTTCAAAAGTTTTAGAAGAGAACCTCAAATTGATGCCATGTAAAATTTAGAATTTTAAACTTTGGTTAAATTACCCAAAAAAAAAAAAAAAATTGTACAACAATTATGAGAATGGTGGAAGTTCTAAGGTCATGTCAATACCGCTGAGTTAAATTACAAATTTAGATCGTTAACATTTAGTTTCTGTAATTTTAGACTAAATTTTAGAAGTTAGAATTTAGTTTTCATAATTTGATAAAACCTCAAATACATATGATTTAATAAAATCTTCATATTTAACCCTTACCATGAAATTTTTTTAACCAAAACTAAATTATAAACCTAAACTAGAAGGACTAAATTATAACTTTTTATAAATTATAGTGATCAAATTTGCAATTTAACCTTAAAATTTTAGAAAATTATATTAAATTGTCTGCAAATACTACATACATATTTTCCATATTCTTGCCCATGTCCATTATAGAAATATTATTTTGGTTATATATTTTATAATTTATTAAATTTTAATTATCGTGTTTTCAAATATAAAAATTTAATTAAATAATAATAATAAATTAATATATGAAAATACATATATTTTTAAAAAATTATCTTAAATGATAAAATTTCTGGAAATAGTATAATTTGTAAATATTTTAATTATTCTGCTATATTTGAAGTGAACCATTATCCCAATATATTATTTTAATCTCATTATCATTTTCTACAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTGACGTCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGAGGCTCGGCAGCGGCAAGTGGCTCCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCTGACACCGACAAGATCTCTGCCAAATTGGAGGAAGGCATCCTCTACGTGAAACAGCCCAAGAAACCCTCCCCCGCCTCTTCCAACAACCTACCGGGTCAGCAGCAACCCAAGCCCAAGGCTGAATCCCAACCACCACCCGCCGACACAAAACCCAAGGCCGAGCCTCCGAAGCCTGCCGCCCCGAAACCCACTGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGAGCCGAGCCTCCAAAGCCCGCTGCCGCGAAACCCACAGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGACCTCAATCACAGCCAATTGGGAAACAAATCCCCACTCCTTCAATGCCAGAGGAGGCAGCCGGTGCACCGGCGAGGACTCCAAAACCCGGGGAGACACCCTCCACAGGCAGGGGACAGCCAGTTCAAGATTTAACTCCAAAGCACAAAACAGAGAAAGAAACAGAGGAGAAGGCAAAAACACATACAAAACTGCAGGATGCTTTGGAGAAGACAAGAGAGGAAATGGAGGATGAGGGGAAAGAAGAAGGTGGGTCAAAAATGGCGGAGGAGAATGAAGGTGGAGTTGCAGAAGGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTGAGGAAATGGTGGAAGAGAGTGGAAGGTTGGGAAGAAGAGGAGGGTACAAACAGGTTATTGATGGAATGGTGAAGGAATTGAGGACAAATATGGTGACTTTGGTTTTGGGAGTTGCTGTTTTTGTTATTGTGTATCTGAATGTTACAAAGAAAGGTCATGTGGAGGAAGAGTTGTGA ATGGATTCTTCTTCTTCAAAAAATTTCCAGGATTTTGAGCCTCGATTTGATTGGGTTCATCATCCCGATTCTCATGTTCTTATCGTCCACCTCTTAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTGACGTCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGAGGCTCGGCAGCGGCAAGTGGCTCCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCTGACACCGACAAGATCTCTGCCAAATTGGAGGAAGGCATCCTCTACGTGAAACAGCCCAAGAAACCCTCCCCCGCCTCTTCCAACAACCTACCGGGTCAGCAGCAACCCAAGCCCAAGGCTGAATCCCAACCACCACCCGCCGACACAAAACCCAAGGCCGAGCCTCCGAAGCCTGCCGCCCCGAAACCCACTGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGAGCCGAGCCTCCAAAGCCCGCTGCCGCGAAACCCACAGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGACCTCAATCACAGCCAATTGGGAAACAAATCCCCACTCCTTCAATGCCAGAGGAGGCAGCCGGTGCACCGGCGAGGACTCCAAAACCCGGGGAGACACCCTCCACAGGCAGGGGACAGCCAGTTCAAGATTTAACTCCAAAGCACAAAACAGAGAAAGAAACAGAGGAGAAGGCAAAAACACATACAAAACTGCAGGATGCTTTGGAGAAGACAAGAGAGGAAATGGAGGATGAGGGGAAAGAAGAAGGTGGGTCAAAAATGGCGGAGGAGAATGAAGGTGGAGTTGCAGAAGGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTGAGGAAATGGTGGAAGAGAGTGGAAGGTTGGGAAGAAGAGGAGGGTACAAACAGGTTATTGATGGAATGGTGAAGGAATTGAGGACAAATATGGTGACTTTGGTTTTGGGAGTTGCTGTTTTTGTTATTGTGTATCTGAATGTTACAAAGAAAGGTCATGTGGAGGAAGAGTTGTGA ATGGATTCTTCTTCTTCAAAAAATTTCCAGGATTTTGAGCCTCGATTTGATTGGGTTCATCATCCCGATTCTCATGTTCTTATCGTCCACCTCTTAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTGACGTCCACCGGAAAGTTGAGGGTCTCCGGCGAACGGAGGCTCGGCAGCGGCAAGTGGCTCCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCTGACACCGACAAGATCTCTGCCAAATTGGAGGAAGGCATCCTCTACGTGAAACAGCCCAAGAAACCCTCCCCCGCCTCTTCCAACAACCTACCGGGTCAGCAGCAACCCAAGCCCAAGGCTGAATCCCAACCACCACCCGCCGACACAAAACCCAAGGCCGAGCCTCCGAAGCCTGCCGCCCCGAAACCCACTGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGAGCCGAGCCTCCAAAGCCCGCTGCCGCGAAACCCACAGTCGACCCACCAACTGTTCGACCAAATGCCCCAAAGAGCCAAAACGAGAGACCTCAATCACAGCCAATTGGGAAACAAATCCCCACTCCTTCAATGCCAGAGGAGGCAGCCGGTGCACCGGCGAGGACTCCAAAACCCGGGGAGACACCCTCCACAGGCAGGGGACAGCCAGTTCAAGATTTAACTCCAAAGCACAAAACAGAGAAAGAAACAGAGGAGAAGGCAAAAACACATACAAAACTGCAGGATGCTTTGGAGAAGACAAGAGAGGAAATGGAGGATGAGGGGAAAGAAGAAGGTGGGTCAAAAATGGCGGAGGAGAATGAAGGTGGAGTTGCAGAAGGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTGAGGAAATGGTGGAAGAGAGTGGAAGGTTGGGAAGAAGAGGAGGGTACAAACAGGTTATTGATGGAATGGTGAAGGAATTGAGGACAAATATGGTGACTTTGGTTTTGGGAGTTGCTGTTTTTGTTATTGTGTATCTGAATGTTACAAAGAAAGGTCATGTGGAGGAAGAGTTGTGA MDSSSSKNFQDFEPRFDWVHHPDSHVLIVHLLGFRSNQLKVQVTSTGKLRVSGERRLGSGKWLRFQKEIDIPADADTDKISAKLEEGILYVKQPKKPSPASSNNLPGQQQPKPKAESQPPPADTKPKAEPPKPAAPKPTVDPPTVRPNAPKSQNERAEPPKPAAAKPTVDPPTVRPNAPKSQNERPQSQPIGKQIPTPSMPEEAAGAPARTPKPGETPSTGRGQPVQDLTPKHKTEKETEEKAKTHTKLQDALEKTREEMEDEGKEEGGSKMAEENEGGVAEGRRRRRRRKRSEEMVEESGRLGRRGGYKQVIDGMVKELRTNMVTLVLGVAVFVIVYLNVTKKGHVEEEL
BLAST of Cla011096 vs. Swiss-Prot
Match: PLRX1_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.7e-13 Identity = 53/165 (32.12%), Postives = 72/165 (43.64%), Query Frame = 1
HSP 2 Score: 74.7 bits (182), Expect = 2.2e-12 Identity = 53/181 (29.28%), Postives = 74/181 (40.88%), Query Frame = 1
BLAST of Cla011096 vs. Swiss-Prot
Match: IF2_THEEB (Translation initiation factor IF-2 OS=Thermosynechococcus elongatus (strain BP-1) GN=infB PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.7e-13 Identity = 55/181 (30.39%), Postives = 81/181 (44.75%), Query Frame = 1
HSP 2 Score: 49.3 bits (116), Expect = 1.0e-04 Identity = 42/170 (24.71%), Postives = 64/170 (37.65%), Query Frame = 1
HSP 3 Score: 45.4 bits (106), Expect = 1.5e-03 Identity = 40/152 (26.32%), Postives = 59/152 (38.82%), Query Frame = 1
BLAST of Cla011096 vs. Swiss-Prot
Match: IF2_MYCGI (Translation initiation factor IF-2 OS=Mycobacterium gilvum (strain PYR-GCK) GN=infB PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.9e-12 Identity = 56/159 (35.22%), Postives = 66/159 (41.51%), Query Frame = 1
BLAST of Cla011096 vs. Swiss-Prot
Match: APG_ARATH (Anther-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 7.2e-11 Identity = 45/126 (35.71%), Postives = 53/126 (42.06%), Query Frame = 1
BLAST of Cla011096 vs. Swiss-Prot
Match: RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.9e-10 Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 1
BLAST of Cla011096 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 9.4e-127 Identity = 247/365 (67.67%), Postives = 278/365 (76.16%), Query Frame = 1
BLAST of Cla011096 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.4e-114 Identity = 235/363 (64.74%), Postives = 272/363 (74.93%), Query Frame = 1
BLAST of Cla011096 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.8e-84 Identity = 188/319 (58.93%), Postives = 206/319 (64.58%), Query Frame = 1
BLAST of Cla011096 vs. TrEMBL
Match: A0A0A0LX62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600080 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 3.2e-66 Identity = 171/368 (46.47%), Postives = 206/368 (55.98%), Query Frame = 1
BLAST of Cla011096 vs. TrEMBL
Match: A0A067L3C2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23864 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30 Identity = 108/336 (32.14%), Postives = 163/336 (48.51%), Query Frame = 1
BLAST of Cla011096 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 466.1 bits (1198), Expect = 5.5e-128 Identity = 252/367 (68.66%), Postives = 281/367 (76.57%), Query Frame = 1
BLAST of Cla011096 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 1.4e-126 Identity = 247/365 (67.67%), Postives = 278/365 (76.16%), Query Frame = 1
BLAST of Cla011096 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 459.9 bits (1182), Expect = 3.9e-126 Identity = 248/369 (67.21%), Postives = 278/369 (75.34%), Query Frame = 1
BLAST of Cla011096 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus]) HSP 1 Score: 421.0 bits (1081), Expect = 2.0e-114 Identity = 235/363 (64.74%), Postives = 272/363 (74.93%), Query Frame = 1
BLAST of Cla011096 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]) HSP 1 Score: 370.5 bits (950), Expect = 3.1e-99 Identity = 208/314 (66.24%), Postives = 228/314 (72.61%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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