CmoCh11G003140 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G003140
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding allergen Ole e 8
LocationCmo_Chr11 : 1519659 .. 1520219 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTGACTCGAACCAGATTACGGCATCAAACGCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCCGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGACGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTAGGAATCACATGCTCCAAGGAGGACTGTCAACGGATGATCCATTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG

mRNA sequence

ATGGCCACTGACTCGAACCAGATTACGGCATCAAACGCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCCGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGACGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTAGGAATCACATGCTCCAAGGAGGACTGTCAACGGATGATCCATTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG

Coding sequence (CDS)

ATGGCCACTGACTCGAACCAGATTACGGCATCAAACGCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCCGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGACGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTAGGAATCACATGCTCCAAGGAGGACTGTCAACGGATGATCCATTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG
Homology
[Close]
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 95/173 (54.91%), Postives = 129/173 (74.57%), Query Frame = 1 

Query: 11  SNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELR 70
           ++A+ E    +  +  + +  EL+KVFD+FD+NGDGKIS+ EL  V K++G+S    EL 
Sbjct: 2   ASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELN 61

Query: 71  AVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLV 130
            V+E++DTD+DG+IN+DEF+  C+     + + A+E+RDAFDLYDQD NGLIS SELH V
Sbjct: 62  RVLEEVDTDRDGYINLDEFSTLCR-----SSSSAAEIRDAFDLYDQDKNGLISASELHQV 121

Query: 131 LNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAA 184
           LNRLG++CS EDC RMI  VD+DGDGNVNFEEF+KMM+++S     N NG+AA
Sbjct: 122 LNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSS---LLNSNGSAA 166

[Close]
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.8e-44
Identity = 88/138 (63.77%), Postives = 111/138 (80.43%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAV 91
           EL+KVFD+FDANGDGKIS+SEL +V KS+G+S   +EL  V++++D D DGFIN +EFA 
Sbjct: 20  ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 92  FCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSVD 151
            C+     + + A E+R+AFDLYDQ+ NGLIS SE+H VLNRLG+TCS EDC RMI  VD
Sbjct: 80  ICR-----SSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVD 139

Query: 152 SDGDGNVNFEEFRKMMSN 170
           +DGDGNVNFEEF+KMMS+
Sbjct: 140 TDGDGNVNFEEFQKMMSS 152

[Close]
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-43
Identity = 98/171 (57.31%), Postives = 124/171 (72.51%), Query Frame = 1 

Query: 10  ASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDEL 69
           A+N D      SKPS  LQ+  E++ VF+RFDANGDGKIS  EL  VLK+LGS+   +E+
Sbjct: 2   AANTDRN----SKPSVYLQEPNEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEI 61

Query: 70  RAVMEDLDTDKDGFINIDEFAVFCK---EPMASNEAGASELRDAFDLYDQDHNGLISQSE 129
             +ME++DTDKDGFIN+ EFA F K   +P  S+  G +EL++AF+LYDQDHNGLIS  E
Sbjct: 62  GRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSS-GGENELKEAFELYDQDHNGLISSVE 121

Query: 130 LHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNS--NSEA 176
           LH +L RLG   ++ DC  MI SVDSDGDG V+FEEF+KMM+N S  NS+A
Sbjct: 122 LHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMTNKSGNNSQA 167

[Close]
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-35
Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 1 

Query: 31  AELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFA 90
           AEL +VF R+DANGDGKIS  EL SVL++LG+ +   E+R +M+++D+D+DGF+++ EFA
Sbjct: 4   AELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFA 63

Query: 91  VFCKEPMASN-----------EAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCS 150
            F   P  ++            A  +ELR+AF +YD D NG IS  ELH VL +LG  CS
Sbjct: 64  AFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCS 123

Query: 151 KEDCQRMIHSVDSDGDGNVNFEEFRKMM 168
             DC RMI SVD+DGDG VNF+EF+KMM
Sbjct: 124 VADCSRMIRSVDADGDGCVNFDEFKKMM 151

[Close]
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEF-A 91
           +++KVF RFD N DGKIS+ EL  V+ +L  +   +E +A+M++ D D +GFI++DEF A
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVA 74

Query: 92  VFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSV 151
           +F     +SN +   +L++AFDLYD D NG IS +ELH V+  LG  CS +DCQRMI+ V
Sbjct: 75  LFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKV 134

Query: 152 DSDGDGNVNFEEFRKMMSNNSNS 174
           DSDGDG V+FEEF+KMM  N ++
Sbjct: 135 DSDGDGCVDFEEFKKMMMINGSA 157

[Close]
BLAST of CmoCh11G003140 vs. TrEMBL
Match: A0A0A0LPP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025020 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-73
Identity = 142/188 (75.53%), Postives = 166/188 (88.30%), Query Frame = 1 

Query: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD N I  S ++ +Q+ K  PS LLQD+ ELRKVF+RFDANGDGKIS+SELD+VL SL
Sbjct: 1   MATDPNPIPTSKSEADQIAKQNPSVLLQDDEELRKVFERFDANGDGKISISELDAVLTSL 60

Query: 61  G--SSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDH 120
              S++P +ELR+VM+DLD+DKDG+INIDEFA FCK+PMAS+EAGA+ELRDAFDLYDQD 
Sbjct: 61  TLKSAIPLEELRSVMDDLDSDKDGYINIDEFAAFCKKPMASDEAGAAELRDAFDLYDQDR 120

Query: 121 NGLISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQ 180
           NGLISQSELHLVLNRLGI+CSKEDCQ+MI+SVDSDGDGNVNFEEFRKMM++NS S+A  Q
Sbjct: 121 NGLISQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEEFRKMMTDNSKSKAAQQ 180

Query: 181 NGTAATAP 187
           NGTAA AP
Sbjct: 181 NGTAAAAP 188

[Close]
BLAST of CmoCh11G003140 vs. TrEMBL
Match: Q93YA8_SESRO (Calcium binding protein OS=Sesbania rostrata GN=cbl1 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.9e-52
Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = 1 

Query: 5   SNQITASNADTEQ--VLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGS 64
           +N     N  TEQ    K+KPS  ++D  EL++VF RFDANGDGKIS++ELD+VL++LGS
Sbjct: 3   TNPTAPENTVTEQNPATKTKPSVYMEDMDELKRVFSRFDANGDGKISVNELDNVLRALGS 62

Query: 65  SVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLI 124
           +VP DEL  VM+DLDTD DGFIN+ EFA FC+   A  + GASELR+AFDLYDQD NGLI
Sbjct: 63  TVPSDELERVMKDLDTDNDGFINLTEFAAFCRSDAA--DGGASELREAFDLYDQDKNGLI 122

Query: 125 SQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSN 173
           S +EL LVLNRLG+ CS E+C  MI SVDSDGDGNVNF+EF++MM+NN++
Sbjct: 123 SAAELCLVLNRLGMKCSVEECHNMIKSVDSDGDGNVNFDEFKQMMTNNNS 170

[Close]
BLAST of CmoCh11G003140 vs. TrEMBL
Match: A0A0R4J3Q2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G053500 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.2e-49
Identity = 110/176 (62.50%), Postives = 131/176 (74.43%), Query Frame = 1 

Query: 5   SNQITASNADT--EQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGS 64
           +N I A N D        +K S  LQD+ EL++VF RFDANGDGKIS+SELD+VL+SLGS
Sbjct: 3   TNPIEAGNGDAAPNPNATTKSSVYLQDSEELKRVFSRFDANGDGKISVSELDNVLRSLGS 62

Query: 65  SVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLI 124
            VP +EL+ VMEDLDTD DGFIN+ EFA FC+   A  + G +EL DAF+LYDQD NGLI
Sbjct: 63  GVPPEELQRVMEDLDTDHDGFINLSEFAAFCRSDTA--DGGDTELHDAFNLYDQDKNGLI 122

Query: 125 SQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNN----SNSE 175
           S +EL  VLNRLG+ CS E+C  MI SVDSDGDGNVNF EF++MMSNN    SN+E
Sbjct: 123 SATELCQVLNRLGMKCSVEECHNMIKSVDSDGDGNVNFPEFKRMMSNNRENASNAE 176

[Close]
BLAST of CmoCh11G003140 vs. TrEMBL
Match: G7LDC5_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_8g107110 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.1e-49
Identity = 103/161 (63.98%), Postives = 125/161 (77.64%), Query Frame = 1 

Query: 10  ASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDEL 69
           A+N +TE    +K S  L D  EL+ VF RFD NGDGKIS++ELD++L+SLGS+VP DEL
Sbjct: 2   ATNPNTETTTTTKSSVYLGDMDELKTVFTRFDTNGDGKISVTELDNILRSLGSTVPKDEL 61

Query: 70  RAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHL 129
           + VMEDLDTD+DGFIN+ EFA FC+    S +   SELR+AFDLYD+D NGLIS +EL  
Sbjct: 62  QRVMEDLDTDRDGFINLAEFAAFCRS--GSADGDVSELREAFDLYDKDKNGLISATELCQ 121

Query: 130 VLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNN 171
           VLN LG+ CS E+C  MI SVDSDGDGNVNFEEF+KMM+NN
Sbjct: 122 VLNTLGMKCSVEECHTMIKSVDSDGDGNVNFEEFKKMMNNN 160

[Close]
BLAST of CmoCh11G003140 vs. TrEMBL
Match: A0A0L9ULE2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g099100 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 100/168 (59.52%), Postives = 128/168 (76.19%), Query Frame = 1 

Query: 5   SNQITASNADT--EQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGS 64
           SN I   N D        +K S  LQD  E+++VF+RFD NGDGKIS+SELD+VL+SLGS
Sbjct: 3   SNPIATGNVDAAPNSDASNKSSVYLQDMDEMKRVFNRFDTNGDGKISVSELDNVLRSLGS 62

Query: 65  SVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLI 124
            VP +EL+ V++DLDTD DGFIN+ EFA F +   A  + G +E++DAF++YDQD NGLI
Sbjct: 63  GVPPEELQGVIDDLDTDHDGFINLSEFAAFYRADTA--DGGDTEVQDAFNMYDQDKNGLI 122

Query: 125 SQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNN 171
           S +EL+ VLNRLG++C+KE+C  MI SVDSDGDGNVNF EF++MMSNN
Sbjct: 123 SATELYQVLNRLGMSCTKEECHNMIKSVDSDGDGNVNFAEFKRMMSNN 168

[Close]
BLAST of CmoCh11G003140 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-46
Identity = 95/173 (54.91%), Postives = 129/173 (74.57%), Query Frame = 1 

Query: 11  SNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELR 70
           ++A+ E    +  +  + +  EL+KVFD+FD+NGDGKIS+ EL  V K++G+S    EL 
Sbjct: 2   ASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELN 61

Query: 71  AVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLV 130
            V+E++DTD+DG+IN+DEF+  C+     + + A+E+RDAFDLYDQD NGLIS SELH V
Sbjct: 62  RVLEEVDTDRDGYINLDEFSTLCR-----SSSSAAEIRDAFDLYDQDKNGLISASELHQV 121

Query: 131 LNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAA 184
           LNRLG++CS EDC RMI  VD+DGDGNVNFEEF+KMM+++S     N NG+AA
Sbjct: 122 LNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSS---LLNSNGSAA 166

[Close]
BLAST of CmoCh11G003140 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-45
Identity = 88/138 (63.77%), Postives = 111/138 (80.43%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAV 91
           EL+KVFD+FDANGDGKIS+SEL +V KS+G+S   +EL  V++++D D DGFIN +EFA 
Sbjct: 20  ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 92  FCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSVD 151
            C+     + + A E+R+AFDLYDQ+ NGLIS SE+H VLNRLG+TCS EDC RMI  VD
Sbjct: 80  ICR-----SSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVD 139

Query: 152 SDGDGNVNFEEFRKMMSN 170
           +DGDGNVNFEEF+KMMS+
Sbjct: 140 TDGDGNVNFEEFQKMMSS 152

[Close]
BLAST of CmoCh11G003140 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-35
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEF-A 91
           +++KVF RFD N DGKIS+ EL  V+ +L  +   +E +A+M++ D D +GFI++DEF A
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVA 74

Query: 92  VFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSV 151
           +F     +SN +   +L++AFDLYD D NG IS +ELH V+  LG  CS +DCQRMI+ V
Sbjct: 75  LFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKV 134

Query: 152 DSDGDGNVNFEEFRKMMSNNSNS 174
           DSDGDG V+FEEF+KMM  N ++
Sbjct: 135 DSDGDGCVDFEEFKKMMMINGSA 157

[Close]
BLAST of CmoCh11G003140 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAV 91
           +++KVF RFD NGDGKIS+ EL  V+++L  +   +E   +M+  D D +GFI++DEF  
Sbjct: 17  DIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVA 76

Query: 92  FCKEPMA---SNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIH 151
             +  +    +N    S+L++AF+LYD D NG IS  ELH V+  LG  CS +DC++MI 
Sbjct: 77  LFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMIS 136

Query: 152 SVDSDGDGNVNFEEFRKMMSNNSNS 174
            VD DGDG VNF+EF+KMMSN   +
Sbjct: 137 KVDIDGDGCVNFDEFKKMMSNGGGA 161

[Close]
BLAST of CmoCh11G003140 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-30
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 1 

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAV 91
           EL  VF +FD NGDGKIS  EL +++ SLG  VP +EL   + ++D   DG+IN +EF  
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 92  FCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSVD 151
              + M  N+     L+DAF +YD D NG IS  ELH VL  LG  CS  +C++MI  VD
Sbjct: 97  LNTKGMDQNDV-LENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVD 156

Query: 152 SDGDGNVNFEEFRKMMSNNSNSE 175
            DGDG ++FEEF+ MM+  S  +
Sbjct: 157 KDGDGTIDFEEFKIMMTMGSRRD 178

[Close]
BLAST of CmoCh11G003140 vs. NCBI nr
Match: gi|659106947|ref|XP_008453475.1| (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.6e-73
Identity = 142/188 (75.53%), Postives = 168/188 (89.36%), Query Frame = 1 

Query: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD NQI  S +D +Q+ K KPS LL+D+ ELRKVF+RFDANGDGKIS++ELD+VL SL
Sbjct: 1   MATDPNQIPTSQSDADQIAKQKPSVLLEDDDELRKVFERFDANGDGKISITELDAVLTSL 60

Query: 61  G--SSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDH 120
              S++P +ELR+VM+DLD+DKDG+INI+EFA FCK+PMAS+EAGA+ELRDAFDLYDQD 
Sbjct: 61  TLKSAIPLEELRSVMDDLDSDKDGYINIEEFAAFCKKPMASDEAGAAELRDAFDLYDQDR 120

Query: 121 NGLISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQ 180
           NGLISQSELHLVLNRLGI+CSKEDCQ+MI+SVDSDGDGNVNFEEFRKMM++NS S+A  Q
Sbjct: 121 NGLISQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEEFRKMMTDNSKSKAAKQ 180

Query: 181 NGTAATAP 187
           NGTAA AP
Sbjct: 181 NGTAAAAP 188

[Close]
BLAST of CmoCh11G003140 vs. NCBI nr
Match: gi|449439129|ref|XP_004137340.1| (PREDICTED: probable calcium-binding protein CML27 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 4.6e-73
Identity = 142/188 (75.53%), Postives = 166/188 (88.30%), Query Frame = 1 

Query: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD N I  S ++ +Q+ K  PS LLQD+ ELRKVF+RFDANGDGKIS+SELD+VL SL
Sbjct: 1   MATDPNPIPTSKSEADQIAKQNPSVLLQDDEELRKVFERFDANGDGKISISELDAVLTSL 60

Query: 61  G--SSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDH 120
              S++P +ELR+VM+DLD+DKDG+INIDEFA FCK+PMAS+EAGA+ELRDAFDLYDQD 
Sbjct: 61  TLKSAIPLEELRSVMDDLDSDKDGYINIDEFAAFCKKPMASDEAGAAELRDAFDLYDQDR 120

Query: 121 NGLISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQ 180
           NGLISQSELHLVLNRLGI+CSKEDCQ+MI+SVDSDGDGNVNFEEFRKMM++NS S+A  Q
Sbjct: 121 NGLISQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEEFRKMMTDNSKSKAAQQ 180

Query: 181 NGTAATAP 187
           NGTAA AP
Sbjct: 181 NGTAAAAP 188

[Close]
BLAST of CmoCh11G003140 vs. NCBI nr
Match: gi|14589311|emb|CAC43238.1| (calcium binding protein [Sesbania rostrata])

HSP 1 Score: 211.8 bits (538), Expect = 9.9e-52
Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = 1 

Query: 5   SNQITASNADTEQ--VLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGS 64
           +N     N  TEQ    K+KPS  ++D  EL++VF RFDANGDGKIS++ELD+VL++LGS
Sbjct: 3   TNPTAPENTVTEQNPATKTKPSVYMEDMDELKRVFSRFDANGDGKISVNELDNVLRALGS 62

Query: 65  SVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLI 124
           +VP DEL  VM+DLDTD DGFIN+ EFA FC+   A  + GASELR+AFDLYDQD NGLI
Sbjct: 63  TVPSDELERVMKDLDTDNDGFINLTEFAAFCRSDAA--DGGASELREAFDLYDQDKNGLI 122

Query: 125 SQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSN 173
           S +EL LVLNRLG+ CS E+C  MI SVDSDGDGNVNF+EF++MM+NN++
Sbjct: 123 SAAELCLVLNRLGMKCSVEECHNMIKSVDSDGDGNVNFDEFKQMMTNNNS 170

[Close]
BLAST of CmoCh11G003140 vs. NCBI nr
Match: gi|1009165393|ref|XP_015901010.1| (PREDICTED: probable calcium-binding protein CML27 [Ziziphus jujuba])

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 104/165 (63.03%), Postives = 132/165 (80.00%), Query Frame = 1 

Query: 9   TASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDE 68
           T S +++E   K K S  +Q+  E++KVF++FDANGDGKIS++EL+ VL++LGS VP +E
Sbjct: 3   TTSPSESE---KPKSSVSIQNMDEVKKVFNQFDANGDGKISITELEKVLETLGSEVPQEE 62

Query: 69  LRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELH 128
           L  VM+DLDTD+DGFI +DEFA FC+    + +A  SELRDAFDLYD+DHNGLIS  ELH
Sbjct: 63  LHRVMDDLDTDRDGFIGLDEFAAFCRS--GTEDAADSELRDAFDLYDRDHNGLISSEELH 122

Query: 129 LVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNS 174
           LVLNRLG+ CS EDC+RMI SVDSDGDGNVNF EF+KMM+N  ++
Sbjct: 123 LVLNRLGMNCSPEDCRRMIRSVDSDGDGNVNFAEFQKMMTNKGSN 162

[Close]
BLAST of CmoCh11G003140 vs. NCBI nr
Match: gi|1012102365|ref|XP_015957722.1| (PREDICTED: probable calcium-binding protein CML26 [Arachis duranensis])

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 1 

Query: 9   TASNADTEQVLKSKPSFL-LQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYD 68
           T   ADT    KS  + + LQD  EL++VF+RFD+NGDGKIS++EL++VL +LGS VP D
Sbjct: 3   TPVTADTNPSSKSNSNLIYLQDMDELKRVFNRFDSNGDGKISVNELNNVLSTLGSGVPPD 62

Query: 69  ELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSEL 128
           EL+ VM+DLDTD DGFI++ EFAVFC+    + + GA+ELRDAF+LYDQD NGLIS +EL
Sbjct: 63  ELQRVMDDLDTDHDGFISLPEFAVFCRSD--TTDGGATELRDAFNLYDQDKNGLISSAEL 122

Query: 129 HLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNN 171
           HLVLNRLG+ CS E+C  MI SVDSDGDGNVNFEEF++MMSNN
Sbjct: 123 HLVLNRLGLKCSVEECHNMIKSVDSDGDGNVNFEEFKQMMSNN 163

The following BLAST results are available for this feature:
BLAST of CmoCh11G003140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML27_ARATH1.8e-4554.91Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=... [more]
CML26_ARATH5.8e-4463.77Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=... [more]
ALL8_OLEEU1.7e-4357.31Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1[more]
CML18_ORYSJ6.4e-3552.03Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 ... [more]
CML23_ARATH2.4e-3451.05Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=... [more]
BLAST of CmoCh11G003140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPP8_CUCSA3.2e-7375.53Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025020 PE=4 SV=1[more]
Q93YA8_SESRO6.9e-5263.53Calcium binding protein OS=Sesbania rostrata GN=cbl1 PE=2 SV=1[more]
A0A0R4J3Q2_SOYBN3.2e-4962.50Uncharacterized protein OS=Glycine max GN=GLYMA_08G053500 PE=4 SV=1[more]
G7LDC5_MEDTR7.1e-4963.98EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_8g107110 PE... [more]
A0A0L9ULE2_PHAAN2.3e-4759.52Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g099100 PE=4 SV=1[more]
BLAST of CmoCh11G003140 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18210.11.0e-4654.91 Calcium-binding EF-hand family protein[more]
AT1G73630.13.3e-4563.77 EF hand calcium-binding protein family[more]
AT1G66400.11.4e-3551.05 calmodulin like 23[more]
AT5G37770.13.2e-3246.90 EF hand calcium-binding protein family[more]
AT1G24620.13.0e-3046.85 EF hand calcium-binding protein family[more]
BLAST of CmoCh11G003140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659106947|ref|XP_008453475.1|1.6e-7375.53PREDICTED: probable calcium-binding protein CML27 [Cucumis melo][more]
gi|449439129|ref|XP_004137340.1|4.6e-7375.53PREDICTED: probable calcium-binding protein CML27 [Cucumis sativus][more]
gi|14589311|emb|CAC43238.1|9.9e-5263.53calcium binding protein [Sesbania rostrata][more]
gi|1009165393|ref|XP_015901010.1|1.4e-5063.03PREDICTED: probable calcium-binding protein CML27 [Ziziphus jujuba][more]
gi|1012102365|ref|XP_015957722.1|1.4e-5065.03PREDICTED: probable calcium-binding protein CML26 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G003140.1CmoCh11G003140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 32..93
score: 7.9E-14coord: 105..167
score: 3.3
IPR002048EF-hand domainSMARTSM00054efh_1coord: 68..96
score: 7.4E-5coord: 142..170
score: 1.2E-4coord: 106..134
score: 2.3E-4coord: 32..60
score: 2.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 138..173
score: 13.621coord: 64..99
score: 12.114coord: 102..137
score: 12.784coord: 28..63
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 28..181
score: 2.1
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 30..178
score: 7.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 77..89
score: -coord: 41..53
score: -coord: 151..163
score: -coord: 115..127
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 32..171
score: 7.9
NoneNo IPR availablePANTHERPTHR10891:SF605CALCIUM-BINDING PROTEIN CML25-RELATEDcoord: 32..171
score: 7.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G003140Cucsa.111510Cucumber (Gy14) v1cgycmoB0258
CmoCh11G003140CmaCh10G003260Cucurbita maxima (Rimu)cmacmoB068
CmoCh11G003140CmaCh11G003070Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G003140Cla018929Watermelon (97103) v1cmowmB128
CmoCh11G003140Csa1G025020Cucumber (Chinese Long) v2cmocuB076
CmoCh11G003140MELO3C017353Melon (DHL92) v3.5.1cmomeB109
CmoCh11G003140ClCG06G014370Watermelon (Charleston Gray)cmowcgB119
CmoCh11G003140CSPI01G04290Wild cucumber (PI 183967)cmocpiB079
CmoCh11G003140Lsi06G012900Bottle gourd (USVL1VR-Ls)cmolsiB128
CmoCh11G003140Cp4.1LG18g06750Cucurbita pepo (Zucchini)cmocpeB108
CmoCh11G003140Cp4.1LG04g13590Cucurbita pepo (Zucchini)cmocpeB129
CmoCh11G003140MELO3C017353.2Melon (DHL92) v3.6.1cmomedB117
CmoCh11G003140CsaV3_1G004290Cucumber (Chinese Long) v3cmocucB0091
CmoCh11G003140Cla97C06G123830Watermelon (97103) v2cmowmbB123
CmoCh11G003140Bhi02G000096Wax gourdcmowgoB0146
CmoCh11G003140CsGy1G004180Cucumber (Gy14) v2cgybcmoB028
CmoCh11G003140Carg15175Silver-seed gourdcarcmoB1064
CmoCh11G003140Carg09105Silver-seed gourdcarcmoB0808
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G003140CmoCh10G003510Cucurbita moschata (Rifu)cmocmoB038
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G003140Wax gourdcmowgoB0130
CmoCh11G003140Cucurbita moschata (Rifu)cmocmoB089
CmoCh11G003140Cucumber (Gy14) v1cgycmoB0313
CmoCh11G003140Cucurbita maxima (Rimu)cmacmoB215
CmoCh11G003140Cucurbita maxima (Rimu)cmacmoB389
CmoCh11G003140Wild cucumber (PI 183967)cmocpiB080
CmoCh11G003140Cucumber (Chinese Long) v2cmocuB077
CmoCh11G003140Melon (DHL92) v3.5.1cmomeB084
CmoCh11G003140Watermelon (Charleston Gray)cmowcgB106
CmoCh11G003140Watermelon (97103) v1cmowmB108
CmoCh11G003140Cucurbita pepo (Zucchini)cmocpeB083
CmoCh11G003140Cucurbita pepo (Zucchini)cmocpeB116
CmoCh11G003140Bottle gourd (USVL1VR-Ls)cmolsiB094
CmoCh11G003140Cucumber (Gy14) v2cgybcmoB029
CmoCh11G003140Melon (DHL92) v3.6.1cmomedB090
CmoCh11G003140Silver-seed gourdcarcmoB0524
CmoCh11G003140Cucumber (Chinese Long) v3cmocucB0092
CmoCh11G003140Watermelon (97103) v2cmowmbB107