CmoCh04G022000 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCCATAAATTCCCTCCTCTCAATCCCCTCCACCCATTCCGCTCCCCTCCTCTTCCCTCCGATCTCCCCTTCCGCCCACCGCCGCCGCCGACGACCACCGGCCTTCACCGTAACTGCCTCATCTCAACCAAAAGAACAAGCCGACAGCAACAGTTACTACGCGGACGGGAAACTAGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGACCGCCGAGCAGACCCACGATCCGCCCCGCGATTGGTTCGACTGGGAGAAACGCTGCTATTCCAACTACGATTCCAACATCTGCGAGGCCCTCGGCTACCTTCAATCGCACTTAATGAACACCAGACCCAGCGTCGCCTTGGGAATGCTCGCGCTTCTTACTCTCAGCGTTCCGGTTTCCTCCGCCGTCGTTCTCCACCGCTTTATCGAAATCGCCGTCGGGCTTCTCGCCGGGATCCGTCTCTGTTAA ATGAATTCCATAAATTCCCTCCTCTCAATCCCCTCCACCCATTCCGCTCCCCTCCTCTTCCCTCCGATCTCCCCTTCCGCCCACCGCCGCCGCCGACGACCACCGGCCTTCACCGTAACTGCCTCATCTCAACCAAAAGAACAAGCCGACAGCAACAGTTACTACGCGGACGGGAAACTAGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGACCGCCGAGCAGACCCACGATCCGCCCCGCGATTGGTTCGACTGGGAGAAACGCTGCTATTCCAACTACGATTCCAACATCTGCGAGGCCCTCGGCTACCTTCAATCGCACTTAATGAACACCAGACCCAGCGTCGCCTTGGGAATGCTCGCGCTTCTTACTCTCAGCGTTCCGGTTTCCTCCGCCGTCGTTCTCCACCGCTTTATCGAAATCGCCGTCGGGCTTCTCGCCGGGATCCGTCTCTGTTAA ATGAATTCCATAAATTCCCTCCTCTCAATCCCCTCCACCCATTCCGCTCCCCTCCTCTTCCCTCCGATCTCCCCTTCCGCCCACCGCCGCCGCCGACGACCACCGGCCTTCACCGTAACTGCCTCATCTCAACCAAAAGAACAAGCCGACAGCAACAGTTACTACGCGGACGGGAAACTAGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATCAAGACCGCCGAGCAGACCCACGATCCGCCCCGCGATTGGTTCGACTGGGAGAAACGCTGCTATTCCAACTACGATTCCAACATCTGCGAGGCCCTCGGCTACCTTCAATCGCACTTAATGAACACCAGACCCAGCGTCGCCTTGGGAATGCTCGCGCTTCTTACTCTCAGCGTTCCGGTTTCCTCCGCCGTCGTTCTCCACCGCTTTATCGAAATCGCCGTCGGGCTTCTCGCCGGGATCCGTCTCTGTTAA
BLAST of CmoCh04G022000 vs. TrEMBL
Match: A0A0A0KPI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571480 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.8e-43 Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TrEMBL
Match: A0A0B2SDN4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_020104 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29 Identity = 79/150 (52.67%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TrEMBL
Match: A0A0R0EAH8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G125500 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29 Identity = 79/150 (52.67%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TrEMBL
Match: I3T362_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-29 Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TrEMBL
Match: A0A068TXI8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032811001 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28 Identity = 62/113 (54.87%), Postives = 90/113 (79.65%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TAIR10
Match: AT2G01300.1 (AT2G01300.1 unknown protein) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27 Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 1
BLAST of CmoCh04G022000 vs. TAIR10
Match: AT1G15010.1 (AT1G15010.1 unknown protein) HSP 1 Score: 117.9 bits (294), Expect = 5.8e-27 Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1
BLAST of CmoCh04G022000 vs. NCBI nr
Match: gi|449465525|ref|XP_004150478.1| (PREDICTED: uncharacterized protein LOC101215395 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 5.5e-43 Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 1
BLAST of CmoCh04G022000 vs. NCBI nr
Match: gi|659074607|ref|XP_008437695.1| (PREDICTED: uncharacterized protein LOC103483039, partial [Cucumis melo]) HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40 Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 1
BLAST of CmoCh04G022000 vs. NCBI nr
Match: gi|1009155099|ref|XP_015895530.1| (PREDICTED: uncharacterized protein LOC107429369 [Ziziphus jujuba]) HSP 1 Score: 143.3 bits (360), Expect = 3.7e-31 Identity = 79/157 (50.32%), Postives = 113/157 (71.97%), Query Frame = 1
BLAST of CmoCh04G022000 vs. NCBI nr
Match: gi|697191665|ref|XP_009604904.1| (PREDICTED: uncharacterized protein LOC104099571 [Nicotiana tomentosiformis]) HSP 1 Score: 138.7 bits (348), Expect = 9.1e-30 Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = 1
BLAST of CmoCh04G022000 vs. NCBI nr
Match: gi|356575634|ref|XP_003555943.1| (PREDICTED: uncharacterized protein LOC100795681 [Glycine max]) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29 Identity = 79/150 (52.67%), Postives = 103/150 (68.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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