ClCG01G006150 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA MKSINSIAFSISSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAALLAAA
BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A0A0KPI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571480 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 9.7e-52 Identity = 112/159 (70.44%), Postives = 123/159 (77.36%), Query Frame = 1
BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A166EE71_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007281 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.3e-32 Identity = 72/139 (51.80%), Postives = 102/139 (73.38%), Query Frame = 1
BLAST of ClCG01G006150 vs. TrEMBL
Match: C6TFT5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G265100 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32 Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 1
BLAST of ClCG01G006150 vs. TrEMBL
Match: W9RD66_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025881 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-32 Identity = 74/155 (47.74%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A0R0EAH8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G125500 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1
BLAST of ClCG01G006150 vs. TAIR10
Match: AT2G01300.1 (AT2G01300.1 unknown protein) HSP 1 Score: 134.0 bits (336), Expect = 7.7e-32 Identity = 61/118 (51.69%), Postives = 91/118 (77.12%), Query Frame = 1
BLAST of ClCG01G006150 vs. TAIR10
Match: AT1G15010.1 (AT1G15010.1 unknown protein) HSP 1 Score: 124.8 bits (312), Expect = 4.6e-29 Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 1
BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|449465525|ref|XP_004150478.1| (PREDICTED: uncharacterized protein LOC101215395 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51 Identity = 112/159 (70.44%), Postives = 123/159 (77.36%), Query Frame = 1
BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|659074607|ref|XP_008437695.1| (PREDICTED: uncharacterized protein LOC103483039, partial [Cucumis melo]) HSP 1 Score: 209.1 bits (531), Expect = 5.3e-51 Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 1
BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|1009155099|ref|XP_015895530.1| (PREDICTED: uncharacterized protein LOC107429369 [Ziziphus jujuba]) HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32 Identity = 77/152 (50.66%), Postives = 113/152 (74.34%), Query Frame = 1
BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|1021048664|gb|KZN06444.1| (hypothetical protein DCAR_007281 [Daucus carota subsp. sativus]) HSP 1 Score: 146.7 bits (369), Expect = 3.2e-32 Identity = 72/139 (51.80%), Postives = 102/139 (73.38%), Query Frame = 1
BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|358249084|ref|NP_001239990.1| (uncharacterized protein LOC100789312 [Glycine max]) HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32 Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |