ClCG01G006150 (gene) Watermelon (Charleston Gray)

NameClCG01G006150
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 6869297 .. 6869761 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA

mRNA sequence

ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA

Coding sequence (CDS)

ATGAAATCCATTAATTCCATCGCCTTCTCAATCTCCTCCACCAATTCCGCTGCCTTCCTCCTCCCTCCCACTCCCTCCGGCCACCGCCTCCGCCGCCTACCAGTGGCTGTAACCATCAGAGCATCGTCTCGATCGTCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTGGTGGACGAGAGCATGATCGTTCTCCGGAAACGAATCCACGAGATCAAGATGGCGGAGCAAAGCCACGATCCGCCGGCCGATTGGTTTGATTGGGAAAAACGGTATTATTCCAATTACGATTCTCATATCTGTGAAGCTTTAGGCTATCTTCAATCTCATTTGATGAATACTCGACCTAGCGTGGCTTTGGGAATGCTCCTTATTATAATCCTCAGCGTTCCGCTTTCCTCCGCCCTCCTTCTCCACCGCTTCTTCCAAATCGCCGCCGCGCTTCTCGCCGCCGCTTAA

Protein sequence

MKSINSIAFSISSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAALLAAA
BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A0A0KPI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571480 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.7e-52
Identity = 112/159 (70.44%), Postives = 123/159 (77.36%), Query Frame = 1

Query: 1   MKSINSIAFSISSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSAD-------NNNNY 60
           M+SINS++FS  S      L  P    H  R+   AVT+RAS   +AD       NNNNY
Sbjct: 1   MESINSLSFSTPS------LFSPAAHPHVRRKPLPAVTVRASREQAADSNNNNKNNNNNY 60

Query: 61  YASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHL 120
           YA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKR+YS+YDSHICEALGYLQSHL
Sbjct: 61  YAGGKVVDESMIVLRKRIHEIKMAEQRQEPPADWLDWEKRWYSDYDSHICEALGYLQSHL 120

Query: 121 MNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAALLA 153
           MNTRPSVALGMLL+II+SVPLSSALLLHRF  IA ALLA
Sbjct: 121 MNTRPSVALGMLLLIIISVPLSSALLLHRFLHIAVALLA 153

BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A166EE71_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007281 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-32
Identity = 72/139 (51.80%), Postives = 102/139 (73.38%), Query Frame = 1

Query: 12  SSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSADN-NNNYYASGKVVDESMIVLRKR 71
           SST++        PS +   +  ++  I    RSS+   N+  Y+  +VVDE++I+LRKR
Sbjct: 5   SSTSTFPLAQSSAPSLNPRIKSAISHKISCLKRSSSGAYNSQNYSGHRVVDENLIILRKR 64

Query: 72  IHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIIL 131
           IHE+KM E++++PPADW DWEKRYY++YD++ICEA+G+LQS LMNTRPS+A+GM+ +I L
Sbjct: 65  IHEMKMIERNYEPPADWMDWEKRYYASYDTYICEAMGFLQSQLMNTRPSLAIGMMALIAL 124

Query: 132 SVPLSSALLLHRFFQIAAA 150
           SVP S+ALL+ RFF I  A
Sbjct: 125 SVPTSTALLVSRFFDIVNA 143

BLAST of ClCG01G006150 vs. TrEMBL
Match: C6TFT5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G265100 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32
Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 1

Query: 10  SISSTNSAAFLLPP-TPSG--HRLRRLPVAVTIRASSRSSADNNNNYYASGKVVDESMIV 69
           SIS  NS+  L  P +PS    + ++      I+ S R SAD N     SG++VDE MI+
Sbjct: 3   SISLVNSSPILFHPFSPSKPCSKGKKTNSFAPIKGSMRGSADQN----FSGRLVDEGMII 62

Query: 70  LRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLL 129
           LRKRIHE+ M E++++PP+DW DWEKRYY+ YDS ICEA+G LQ+ LMNTRPS+ALG + 
Sbjct: 63  LRKRIHEMNMIERNYEPPSDWMDWEKRYYTKYDSIICEAVGVLQTQLMNTRPSLALGAMA 122

Query: 130 IIILSVPLSSALLLHRFFQIAAALLAAA 155
           ++ +SVP SSA+L    F++A A+LAAA
Sbjct: 123 LVAISVPTSSAVLFFHLFELAKAVLAAA 146

BLAST of ClCG01G006150 vs. TrEMBL
Match: W9RD66_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025881 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-32
Identity = 74/155 (47.74%), Postives = 106/155 (68.39%), Query Frame = 1

Query: 3   SINSIAFSISSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSADNN------NNYYAS 62
           S+N+ +F +S T     LLP      R     VA  I AS R    N+      N+Y +S
Sbjct: 7   SVNTFSFHLSKTG----LLPLDWRSRRSSSRVVATRILASRRDHQANHHHNHHHNHYMSS 66

Query: 63  GKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNT 122
            ++VDE+MIVLRKRIHE+KM E++++PP+DW DWEK+YY++YDS IC+ +G+LQS +MNT
Sbjct: 67  SRLVDENMIVLRKRIHEMKMVERNYEPPSDWMDWEKKYYTSYDSLICQMMGFLQSQMMNT 126

Query: 123 RPSVALGMLLIIILSVPLSSALLLHRFFQIAAALL 152
           RPS+ALGM++++ILS+P SS ++L     +A  LL
Sbjct: 127 RPSLALGMVVLVILSLPTSSVMVLFHLMGLAKELL 157

BLAST of ClCG01G006150 vs. TrEMBL
Match: A0A0R0EAH8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G125500 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31
Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1

Query: 10  SISSTNSAAFLL----PPTPSGHRLRRLPVAVTIRASSRSSADNNNNYYASGKVVDESMI 69
           SIS  NS+  L     P  P  +  +    A T +AS R SAD N     SG++VDESMI
Sbjct: 3   SISLFNSSPILFHPFSPSRPCSNGKKMNSFAPT-KASMRGSADQN----FSGRLVDESMI 62

Query: 70  VLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGML 129
           +LRKRIHE+ M E++++PP+DW DWEKRYY+ YDS ICEA+G LQS LMNTRPS+ALG +
Sbjct: 63  ILRKRIHEMNMIERNYEPPSDWMDWEKRYYNKYDSIICEAVGVLQSQLMNTRPSLALGAM 122

Query: 130 LIIILSVPLSSALLLHRFFQIAAALLAAA 155
            ++ +SVP SSA+LL    ++A  +LA A
Sbjct: 123 ALVAISVPTSSAVLLFHLVELAKVVLAGA 146

BLAST of ClCG01G006150 vs. TAIR10
Match: AT2G01300.1 (AT2G01300.1 unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 7.7e-32
Identity = 61/118 (51.69%), Postives = 91/118 (77.12%), Query Frame = 1

Query: 37  VTIRASSRSSADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYS 96
           +T+R S+ +S+   ++YY  G++VDE+MIVLRKRIHE+KM E++++PP+ W DWEKR+Y+
Sbjct: 34  MTMRVSAAASS-GKDHYYGGGRLVDENMIVLRKRIHEMKMVERNYEPPSHWMDWEKRFYN 93

Query: 97  NYDSHICEALGYLQSHLMNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAALLAAA 155
           +YDS IC+++G LQS LMN+RP+VA+  LL +++SVP+SS ++  R   +   LLAAA
Sbjct: 94  SYDSVICDSVGLLQSFLMNSRPTVAIATLLFLLVSVPVSSTVIAFRLIDLLHWLLAAA 150

BLAST of ClCG01G006150 vs. TAIR10
Match: AT1G15010.1 (AT1G15010.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 4.6e-29
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 1

Query: 39  IRASSRSSADNNN--------NYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDW 98
           +R S R +   N         +YY  G+ VDE+M+VLRKRIHE+KM E++ +PP+ W  W
Sbjct: 16  LRTSQRIATGTNRRRTTTVCADYYRGGRTVDENMVVLRKRIHEMKMVERNFEPPSHWMQW 75

Query: 99  EKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAAL 154
           EKR+Y NYD+ IC+AL  LQ+ LMN+RPSVA G  L++++SVP+SSA+   R   +A  L
Sbjct: 76  EKRFYCNYDATICDALTLLQTFLMNSRPSVAFGTCLLLLVSVPVSSAVFAFRILDLALWL 135

BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|449465525|ref|XP_004150478.1| (PREDICTED: uncharacterized protein LOC101215395 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51
Identity = 112/159 (70.44%), Postives = 123/159 (77.36%), Query Frame = 1

Query: 1   MKSINSIAFSISSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSAD-------NNNNY 60
           M+SINS++FS  S      L  P    H  R+   AVT+RAS   +AD       NNNNY
Sbjct: 1   MESINSLSFSTPS------LFSPAAHPHVRRKPLPAVTVRASREQAADSNNNNKNNNNNY 60

Query: 61  YASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHL 120
           YA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKR+YS+YDSHICEALGYLQSHL
Sbjct: 61  YAGGKVVDESMIVLRKRIHEIKMAEQRQEPPADWLDWEKRWYSDYDSHICEALGYLQSHL 120

Query: 121 MNTRPSVALGMLLIIILSVPLSSALLLHRFFQIAAALLA 153
           MNTRPSVALGMLL+II+SVPLSSALLLHRF  IA ALLA
Sbjct: 121 MNTRPSVALGMLLLIIISVPLSSALLLHRFLHIAVALLA 153

BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|659074607|ref|XP_008437695.1| (PREDICTED: uncharacterized protein LOC103483039, partial [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 5.3e-51
Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 1

Query: 20  LLP--PTPSGHRLRRLPVAVTIRASSRSSADNNNN-------YYASGKVVDESMIVLRKR 79
           LLP  P P  H  R+   AVT+RAS   +ADNNNN       YYA GKVVDESMIVLRKR
Sbjct: 8   LLPLLPRPHPHGRRKPLPAVTVRASREQAADNNNNNNNNYNDYYAGGKVVDESMIVLRKR 67

Query: 80  IHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIIL 139
           IHEIKMAEQ  +PPADW DWEKRYYS+YDSHICEALGYLQSHLMNTRPSVALGMLL+II+
Sbjct: 68  IHEIKMAEQRQEPPADWLDWEKRYYSDYDSHICEALGYLQSHLMNTRPSVALGMLLLIIV 127

Query: 140 SVPLSSALLLHRFFQIAAALLA 153
           SVPLSSALLLHRFF IA ALLA
Sbjct: 128 SVPLSSALLLHRFFHIAVALLA 149

BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|1009155099|ref|XP_015895530.1| (PREDICTED: uncharacterized protein LOC107429369 [Ziziphus jujuba])

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32
Identity = 77/152 (50.66%), Postives = 113/152 (74.34%), Query Frame = 1

Query: 6   SIAFSISSTNSAAFLLPPTPSGHR--LRRLPVAVTIRASSR--SSADNNNNYYASG-KVV 65
           SI+F + S+N  +F      SG     R+   +  + ASSR  SS  N+ NYY+S  ++V
Sbjct: 3   SISF-LPSSNPLSFNPISDSSGKTADFRKRASSTRVCASSRRSSSEANDQNYYSSSSRLV 62

Query: 66  DESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSV 125
           DE+MIVLRKRIHE+KM E++++PP+DW +WEK+YY++YDS +C+ALG LQS +MNTRPS+
Sbjct: 63  DENMIVLRKRIHEMKMVERNYEPPSDWNEWEKKYYTSYDSFVCQALGVLQSQMMNTRPSL 122

Query: 126 ALGMLLIIILSVPLSSALLLHRFFQIAAALLA 153
           ALGM+++I+LSVP+S+ ++L R  +IA  +LA
Sbjct: 123 ALGMMVLILLSVPMSTTMILFRLMEIANGVLA 153

BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|1021048664|gb|KZN06444.1| (hypothetical protein DCAR_007281 [Daucus carota subsp. sativus])

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-32
Identity = 72/139 (51.80%), Postives = 102/139 (73.38%), Query Frame = 1

Query: 12  SSTNSAAFLLPPTPSGHRLRRLPVAVTIRASSRSSADN-NNNYYASGKVVDESMIVLRKR 71
           SST++        PS +   +  ++  I    RSS+   N+  Y+  +VVDE++I+LRKR
Sbjct: 5   SSTSTFPLAQSSAPSLNPRIKSAISHKISCLKRSSSGAYNSQNYSGHRVVDENLIILRKR 64

Query: 72  IHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLLIIIL 131
           IHE+KM E++++PPADW DWEKRYY++YD++ICEA+G+LQS LMNTRPS+A+GM+ +I L
Sbjct: 65  IHEMKMIERNYEPPADWMDWEKRYYASYDTYICEAMGFLQSQLMNTRPSLAIGMMALIAL 124

Query: 132 SVPLSSALLLHRFFQIAAA 150
           SVP S+ALL+ RFF I  A
Sbjct: 125 SVPTSTALLVSRFFDIVNA 143

BLAST of ClCG01G006150 vs. NCBI nr
Match: gi|358249084|ref|NP_001239990.1| (uncharacterized protein LOC100789312 [Glycine max])

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32
Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 1

Query: 10  SISSTNSAAFLLPP-TPSG--HRLRRLPVAVTIRASSRSSADNNNNYYASGKVVDESMIV 69
           SIS  NS+  L  P +PS    + ++      I+ S R SAD N     SG++VDE MI+
Sbjct: 3   SISLVNSSPILFHPFSPSKPCSKGKKTNSFAPIKGSMRGSADQN----FSGRLVDEGMII 62

Query: 70  LRKRIHEIKMAEQSHDPPADWFDWEKRYYSNYDSHICEALGYLQSHLMNTRPSVALGMLL 129
           LRKRIHE+ M E++++PP+DW DWEKRYY+ YDS ICEA+G LQ+ LMNTRPS+ALG + 
Sbjct: 63  LRKRIHEMNMIERNYEPPSDWMDWEKRYYTKYDSIICEAVGVLQTQLMNTRPSLALGAMA 122

Query: 130 IIILSVPLSSALLLHRFFQIAAALLAAA 155
           ++ +SVP SSA+L    F++A A+LAAA
Sbjct: 123 LVAISVPTSSAVLFFHLFELAKAVLAAA 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KPI5_CUCSA9.7e-5270.44Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571480 PE=4 SV=1[more]
A0A166EE71_DAUCA2.3e-3251.80Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007281 PE=4 SV=1[more]
C6TFT5_SOYBN2.9e-3252.03Uncharacterized protein OS=Glycine max GN=GLYMA_10G265100 PE=2 SV=1[more]
W9RD66_9ROSA3.9e-3247.74Uncharacterized protein OS=Morus notabilis GN=L484_025881 PE=4 SV=1[more]
A0A0R0EAH8_SOYBN1.1e-3152.35Uncharacterized protein OS=Glycine max GN=GLYMA_20G125500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G01300.17.7e-3251.69 unknown protein[more]
AT1G15010.14.6e-2948.78 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449465525|ref|XP_004150478.1|1.4e-5170.44PREDICTED: uncharacterized protein LOC101215395 [Cucumis sativus][more]
gi|659074607|ref|XP_008437695.1|5.3e-5176.76PREDICTED: uncharacterized protein LOC103483039, partial [Cucumis melo][more]
gi|1009155099|ref|XP_015895530.1|2.5e-3250.66PREDICTED: uncharacterized protein LOC107429369 [Ziziphus jujuba][more]
gi|1021048664|gb|KZN06444.1|3.2e-3251.80hypothetical protein DCAR_007281 [Daucus carota subsp. sativus][more]
gi|358249084|ref|NP_001239990.1|4.2e-3252.03uncharacterized protein LOC100789312 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G006150.1ClCG01G006150.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33782FAMILY NOT NAMEDcoord: 2..154
score: 4.4
NoneNo IPR availablePANTHERPTHR33782:SF5SUBFAMILY NOT NAMEDcoord: 2..154
score: 4.4

The following gene(s) are paralogous to this gene:

None