CmoCh04G003790 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G003790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor 3
LocationCmo_Chr04 : 1880440 .. 1881039 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

mRNA sequence

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Coding sequence (CDS)

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA
Homology
[Close]
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-31
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPP 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +    +  +  +    P  P
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 60

Query: 61  PVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATG---EKVKKHFRGVRRR 120
            +  +   NE    E    S    +++      + + +V  A     E   +H+RGVRRR
Sbjct: 61  VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRR 120

Query: 121 PWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 180
           PWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + P
Sbjct: 121 PWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAP 180

Query: 181 AVANSKRGR 184
           A +  KR R
Sbjct: 181 ANSGRKRKR 185

[Close]
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-28
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 1 

Query: 40  LEDFFFDS--------QITPPLPLPPPVPAEGS-DNETKSSEVVHPSLPKTDMSGQVCHV 99
           +EDF FD          + P  P+P   P+    D ++   E++      +  S      
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 KAEDAVAGATGEKVK--KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAY 159
           + E        ++ +  +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGR 184
           D AAF+LRGRKA+LNFPL+AG+ D P  +  KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  +   T P  +    P
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSE---TGPRTITNQSP 60

Query: 61  AEGSD-NETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKF 120
              S  N+ K      P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+
Sbjct: 61  KPNSTLNQRK------PPLPNLSVSRTVS-TKTEK-------EEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 168
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1 

Query: 43  FFFDSQIT-PPLPLPPPVPAEGSDNETKSSEVVHP----SLPKTDMSGQVCHVKAEDAVA 102
           F FDS+++       P    +        S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 185
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-25
Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 1 

Query: 105 KKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNF 164
           KKH+RGVR+RPWGKFAAEIRDPNRKG+RVWLGT+D+ ++AAKAYD AAF+LRG KAI+NF
Sbjct: 142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNF 201

Query: 165 PLEAG---EPDPPAVANSKRGRQK 186
           PLE     + D   +  +  GR++
Sbjct: 202 PLEVANFKQQDNEILQPANSGRKR 225

[Close]
BLAST of CmoCh04G003790 vs. TrEMBL
Match: A0A0A0KXM4_CUCSA (DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 145/203 (71.43%), Postives = 158/203 (77.83%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I PPLP PP + 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPI-PPLPPPPEI- 60

Query: 61  AEGSDNETKSSEVVHPS-LP--KTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWG 120
              S N+TK  +VV PS LP  + DMS Q C  + + AV  A+G K ++HFRGVRRRPWG
Sbjct: 61  ---SGNDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWG 120

Query: 121 KFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVA 180
           KFAAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A
Sbjct: 121 KFAAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAA 180

Query: 181 NSKRGR-QKWTNVRKGLMAMNEK 200
           + KRGR QKW N+ K LMA NEK
Sbjct: 181 DRKRGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmoCh04G003790 vs. TrEMBL
Match: T1QCY4_CARPA (Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-36
Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++   F F+ Q        P  P
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQ---FNFNPQYKQE---EPDSP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
              + N+      +H + P+  +S     +   D      GE+ +KH+RG RRRPWGKFA
Sbjct: 61  ISDTHNQFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    K
Sbjct: 121 AEIRDPNRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRK 169

Query: 181 RGRQK 186
           R R+K
Sbjct: 181 RRREK 169

[Close]
BLAST of CmoCh04G003790 vs. TrEMBL
Match: B9R9Y6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.3e-35
Identity = 97/198 (48.99%), Postives = 124/198 (62.63%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHP----IKLEDFFFDSQITPPLPL 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP    +KLE    +   + P P 
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESD--NCPASSPEPK 60

Query: 61  PPPVPAEGSDNETKSSEVVHPSLPKT-DMSGQVCHVKAEDAVAGATG-EKVKKHFRGVRR 120
            P        ++ K  EVV P+ P+   ++ +  + ++    + A   E+ K+H+RGVRR
Sbjct: 61  SPVSDLIQYAHDAKP-EVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRR 120

Query: 121 RPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDP 180
           RPWGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DP
Sbjct: 121 RPWGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADP 180

Query: 181 PAVANSKRGRQKWTNVRK 192
           P     KR R K  +V +
Sbjct: 181 PKNTGRKRRRVKRADVEE 195

[Close]
BLAST of CmoCh04G003790 vs. TrEMBL
Match: A0A067JF46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34
Identity = 94/200 (47.00%), Postives = 119/200 (59.50%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGD---------SLDHQTHFETDSSFLHPIKLEDFFFDSQITP 60
           MA+ +E   +E I Q LLGD         +LD  +H  +    L P+KLE    D  ++ 
Sbjct: 1   MATPQESSALELIRQHLLGDFTSTDVFISNLD--SHISSLVHNLQPVKLETQ--DESLSG 60

Query: 61  PLPLPPPVPAEGSDNETKSSEVVHP--SLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFR 120
                    +E + + + S +  H    L   + SG     ++    A    +  KKH+R
Sbjct: 61  ---------SESNSSVSDSFQYTHEFVDLKSQEYSGSGSVKRSSTPKAKPADDDEKKHYR 120

Query: 121 GVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAG 180
           GVRRRPWGKFAAEIRDP+RKGSRVWLGT+D+D+DAAKAYDCAAFR+RGRKAILNFPLEAG
Sbjct: 121 GVRRRPWGKFAAEIRDPSRKGSRVWLGTFDTDIDAAKAYDCAAFRMRGRKAILNFPLEAG 180

Query: 181 EPDPPAVANSKRGRQKWTNV 190
             DPPA    KR R K  +V
Sbjct: 181 RADPPANTGRKRRRVKREDV 187

[Close]
BLAST of CmoCh04G003790 vs. TrEMBL
Match: A0A067DAI6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030002mg PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34
Identity = 99/205 (48.29%), Postives = 125/205 (60.98%), Query Frame = 1 

Query: 1   MASLEEFFNI-EFITQFLLGD--SLDHQTHFETDSSFLHPIKLEDFFFDSQITPPL---- 60
           M +LEE  +I EFI QFLLGD  SLD     + + SFL P++ E     S+   P     
Sbjct: 4   MTTLEEESSILEFIRQFLLGDFTSLD-----DPNLSFLQPMESEFPVIKSEPDSPTFCEI 63

Query: 61  --PLPPPVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGV 120
             P P  +   GS N T+S +                  K+ +     T E+  KH+RGV
Sbjct: 64  IKPEPLDITCLGSSNWTESPQ------------------KSSEPKLADTEER--KHYRGV 123

Query: 121 RRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEP 180
           RRRPWGK+AAEIRDP RKGSRVWLGT+DSDVDAAKAYD AAFR+RGRKAILNFPLEAG  
Sbjct: 124 RRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 183

Query: 181 DPPAVANSKRGRQKWTNVRKGLMAM 197
            PPA  + KR R+K  ++++  +++
Sbjct: 184 SPPAKNSRKRRREKTLDLQESTISI 183

[Close]
BLAST of CmoCh04G003790 vs. TAIR10
Match: AT5G07580.1 (AT5G07580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-32
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPP 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +    +  +  +    P  P
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 127

Query: 61  PVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATG---EKVKKHFRGVRRR 120
            +  +   NE    E    S    +++      + + +V  A     E   +H+RGVRRR
Sbjct: 128 VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRR 187

Query: 121 PWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 180
           PWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + P
Sbjct: 188 PWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAP 247

Query: 181 AVANSKRGR 184
           A +  KR R
Sbjct: 248 ANSGRKRKR 252

[Close]
BLAST of CmoCh04G003790 vs. TAIR10
Match: AT5G61590.1 (AT5G61590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-29
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 1 

Query: 40  LEDFFFDS--------QITPPLPLPPPVPAEGS-DNETKSSEVVHPSLPKTDMSGQVCHV 99
           +EDF FD          + P  P+P   P+    D ++   E++      +  S      
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 KAEDAVAGATGEKVK--KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAY 159
           + E        ++ +  +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGR 184
           D AAF+LRGRKA+LNFPL+AG+ D P  +  KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmoCh04G003790 vs. TAIR10
Match: AT5G47230.1 (AT5G47230.1 ethylene responsive element binding factor 5)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1 

Query: 43  FFFDSQIT-PPLPLPPPVPAEGSDNETKSSEVVHP----SLPKTDMSGQVCHVKAEDAVA 102
           F FDS+++       P    +        S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 185
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of CmoCh04G003790 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  +   T P  +    P
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSE---TGPRTITNQSP 60

Query: 61  AEGSD-NETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKF 120
              S  N+ K      P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+
Sbjct: 61  KPNSTLNQRK------PPLPNLSVSRTVS-TKTEK-------EEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 168
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmoCh04G003790 vs. TAIR10
Match: AT5G51190.1 (AT5G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.1e-26
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 92  AEDAVAGATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCA 151
           A    A    E  ++H+RGVRRRPWGK+AAEIRDPN+KG RVWLGT+D+ ++AA+ YD A
Sbjct: 56  AVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 115

Query: 152 AFRLRGRKAILNFPLEAGE 171
           AF+LRG KAILNFPLEAG+
Sbjct: 116 AFKLRGSKAILNFPLEAGK 134

[Close]
BLAST of CmoCh04G003790 vs. NCBI nr
Match: gi|659107812|ref|XP_008453871.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-68
Identity = 146/205 (71.22%), Postives = 159/205 (77.56%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           M S +EF  IEFITQFLLGD  DHQTHF TDS FLHPIKLEDFFFDS I PPLP PP + 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQTHFPTDSPFLHPIKLEDFFFDSPI-PPLPPPPEI- 60

Query: 61  AEGSDNETKS-SEVVHPSL-PKTDMSGQVC--HVKAEDAVAGATGEKV-KKHFRGVRRRP 120
              SDN+TK   +VV  S  P  DMS Q C   + A+ +V  A+G K  ++HFRGVRRRP
Sbjct: 61  ---SDNDTKKPGKVVDQSTTPDPDMSTQACGAELAAKVSVVEASGGKAGRRHFRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 
Sbjct: 121 WGKFAAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPT 180

Query: 181 VANSKRGR-QKWTNVRKGLMAMNEK 200
            A+ KRGR QKW N+ K LMA NEK
Sbjct: 181 AADRKRGRGQKWRNISKALMATNEK 200

[Close]
BLAST of CmoCh04G003790 vs. NCBI nr
Match: gi|449458407|ref|XP_004146939.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 1.6e-68
Identity = 145/203 (71.43%), Postives = 158/203 (77.83%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I PPLP PP + 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPI-PPLPPPPEI- 60

Query: 61  AEGSDNETKSSEVVHPS-LP--KTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWG 120
              S N+TK  +VV PS LP  + DMS Q C  + + AV  A+G K ++HFRGVRRRPWG
Sbjct: 61  ---SGNDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWG 120

Query: 121 KFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVA 180
           KFAAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A
Sbjct: 121 KFAAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAA 180

Query: 181 NSKRGR-QKWTNVRKGLMAMNEK 200
           + KRGR QKW N+ K LMA NEK
Sbjct: 181 DRKRGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmoCh04G003790 vs. NCBI nr
Match: gi|410108801|gb|AFV60735.1| (ethylene-responsive transcription factor 3 [Carica papaya])

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++   F F+ Q        P  P
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQ---FNFNPQYKQE---EPDSP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
              + N+      +H + P+  +S     +   D      GE+ +KH+RG RRRPWGKFA
Sbjct: 61  ISDTHNQFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    K
Sbjct: 121 AEIRDPNRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRK 169

Query: 181 RGRQK 186
           R R+K
Sbjct: 181 RRREK 169

[Close]
BLAST of CmoCh04G003790 vs. NCBI nr
Match: gi|223550126|gb|EEF51613.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 155.6 bits (392), Expect = 9.0e-35
Identity = 97/198 (48.99%), Postives = 124/198 (62.63%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHP----IKLEDFFFDSQITPPLPL 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP    +KLE    +   + P P 
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESD--NCPASSPEPK 60

Query: 61  PPPVPAEGSDNETKSSEVVHPSLPKT-DMSGQVCHVKAEDAVAGATG-EKVKKHFRGVRR 120
            P        ++ K  EVV P+ P+   ++ +  + ++    + A   E+ K+H+RGVRR
Sbjct: 61  SPVSDLIQYAHDAKP-EVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRR 120

Query: 121 RPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDP 180
           RPWGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DP
Sbjct: 121 RPWGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADP 180

Query: 181 PAVANSKRGRQKWTNVRK 192
           P     KR R K  +V +
Sbjct: 181 PKNTGRKRRRVKRADVEE 195

[Close]
BLAST of CmoCh04G003790 vs. NCBI nr
Match: gi|1000984397|ref|XP_002511011.2| (PREDICTED: ethylene-responsive transcription factor ERF106 [Ricinus communis])

HSP 1 Score: 155.6 bits (392), Expect = 9.0e-35
Identity = 97/198 (48.99%), Postives = 124/198 (62.63%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHP----IKLEDFFFDSQITPPLPL 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP    +KLE    +   + P P 
Sbjct: 120 MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESD--NCPASSPEPK 179

Query: 61  PPPVPAEGSDNETKSSEVVHPSLPKT-DMSGQVCHVKAEDAVAGATG-EKVKKHFRGVRR 120
            P        ++ K  EVV P+ P+   ++ +  + ++    + A   E+ K+H+RGVRR
Sbjct: 180 SPVSDLIQYAHDAKP-EVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRR 239

Query: 121 RPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDP 180
           RPWGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DP
Sbjct: 240 RPWGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADP 299

Query: 181 PAVANSKRGRQKWTNVRK 192
           P     KR R K  +V +
Sbjct: 300 PKNTGRKRRRVKRADVEE 314

The following BLAST results are available for this feature:
BLAST of CmoCh04G003790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF106_ARATH2.7e-3143.39Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF10... [more]
EF107_ARATH6.3e-2844.52Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF10... [more]
EF104_ARATH1.5e-2646.43Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF10... [more]
EF102_ARATH1.5e-2646.26Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 ... [more]
ERF5_TOBAC5.0e-2564.29Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=... [more]
BLAST of CmoCh04G003790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXM4_CUCSA1.1e-6871.43DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1[more]
T1QCY4_CARPA2.5e-3650.81Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1[more]
B9R9Y6_RICCO6.3e-3548.99DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1[more]
A0A067JF46_JATCU1.1e-3447.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1[more]
A0A067DAI6_CITSI1.4e-3448.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030002mg PE=4 SV=1[more]
BLAST of CmoCh04G003790 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07580.11.5e-3243.39 Integrase-type DNA-binding superfamily protein[more]
AT5G61590.13.5e-2944.52 Integrase-type DNA-binding superfamily protein[more]
AT5G47230.18.7e-2846.26 ethylene responsive element binding factor 5[more]
AT5G61600.18.7e-2846.43 ethylene response factor 104[more]
AT5G51190.18.1e-2665.82 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh04G003790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107812|ref|XP_008453871.1|1.2e-6871.22PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo][more]
gi|449458407|ref|XP_004146939.1|1.6e-6871.43PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus][more]
gi|410108801|gb|AFV60735.1|3.7e-3650.81ethylene-responsive transcription factor 3 [Carica papaya][more]
gi|223550126|gb|EEF51613.1|9.0e-3548.99DNA binding protein, putative [Ricinus communis][more]
gi|1000984397|ref|XP_002511011.2|9.0e-3548.99PREDICTED: ethylene-responsive transcription factor ERF106 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G003790.1CmoCh04G003790.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 108..119
score: 1.2E-12coord: 147..167
score: 1.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 107..166
score: 3.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 107..157
score: 1.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 107..171
score: 6.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 107..165
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 107..167
score: 1.18
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 105..175
score: 5.4
NoneNo IPR availablePANTHERPTHR31677:SF24ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106coord: 105..175
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G003790Cucsa.094100Cucumber (Gy14) v1cgycmoB0197
CmoCh04G003790CmaCh04G003610Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G003790CmaCh16G002180Cucurbita maxima (Rimu)cmacmoB338
CmoCh04G003790Cla010713Watermelon (97103) v1cmowmB687
CmoCh04G003790Csa4G023020Cucumber (Chinese Long) v2cmocuB700
CmoCh04G003790MELO3C017645Melon (DHL92) v3.5.1cmomeB694
CmoCh04G003790ClCG01G004700Watermelon (Charleston Gray)cmowcgB639
CmoCh04G003790ClCG07G016980Watermelon (Charleston Gray)cmowcgB671
CmoCh04G003790CSPI04G04150Wild cucumber (PI 183967)cmocpiB708
CmoCh04G003790Lsi07G001160Bottle gourd (USVL1VR-Ls)cmolsiB690
CmoCh04G003790Lsi09G004870Bottle gourd (USVL1VR-Ls)cmolsiB614
CmoCh04G003790Cp4.1LG05g07350Cucurbita pepo (Zucchini)cmocpeB707
CmoCh04G003790Cp4.1LG01g03420Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G003790MELO3C017645.2Melon (DHL92) v3.6.1cmomedB788
CmoCh04G003790CsaV3_4G004210Cucumber (Chinese Long) v3cmocucB0828
CmoCh04G003790CsaV3_5G004890Cucumber (Chinese Long) v3cmocucB0871
CmoCh04G003790Cla97C07G144030Watermelon (97103) v2cmowmbB749
CmoCh04G003790Cla97C01G004910Watermelon (97103) v2cmowmbB678
CmoCh04G003790Bhi01G002005Wax gourdcmowgoB0851
CmoCh04G003790CsGy4G004060Cucumber (Gy14) v2cgybcmoB516
CmoCh04G003790Carg16760Silver-seed gourdcarcmoB1177
CmoCh04G003790Carg08494Silver-seed gourdcarcmoB0972
CmoCh04G003790Carg08035Silver-seed gourdcarcmoB0514
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G003790CmoCh16G002360Cucurbita moschata (Rifu)cmocmoB286
CmoCh04G003790CmoCh02G009910Cucurbita moschata (Rifu)cmocmoB435
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G003790Wax gourdcmowgoB0810
CmoCh04G003790Cucurbita pepo (Zucchini)cmocpeB668