CmaCh16G002180 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G002180
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor 3
LocationCma_Chr16 : 991167 .. 991760 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCCTCAGAAGAATTCTTATCCATAGAATTCATAACCCAATTTCTGTTGGTAGATTCCTCAGATCACCAAACCCATTTCCAAACAGATTCCCCCTTTCTCCACTCCATCAAATTGGAAGATTTCATTTTCGATTCCCCAATTCCGCCATCACCGCCTCCGGCGGAAGGCTGCTACAACGACACGAAGTCCGGCAAAGTTGAAGACTGGTCGACACCGAAGACCGACATGTTGGGTCAGGCCAGCAAAGCCGATGCGGAAGCCTCTGTGGCAGGGAAGACAAACACCGACAAGAAGGGGAGAAGTCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATTCGTGATCCGACCCGGAAGGGGATTCGGGTTTGGTTGGGGACATACGGCAGTGATATAGACGCGGCTAAGGCCTACGACTGTGCGGCGTTTAGACTGAGAGGGAGGAAAGCCGTTTTGAATTTCCCATTGGAGGCCGGAGAACCCGACCCGCCGGCGGTGTCCGGCCAGAAGAGGGGAAGGGGGCAGAAATGGAGGAATATTCCCAAGGCATTGATGGCAATGGATGAGAAGTAA

mRNA sequence

ATGGCGTCCTCAGAAGAATTCTTATCCATAGAATTCATAACCCAATTTCTGTTGGTAGATTCCTCAGATCACCAAACCCATTTCCAAACAGATTCCCCCTTTCTCCACTCCATCAAATTGGAAGATTTCATTTTCGATTCCCCAATTCCGCCATCACCGCCTCCGGCGGAAGGCTGCTACAACGACACGAAGTCCGGCAAAGTTGAAGACTGGTCGACACCGAAGACCGACATGTTGGGTCAGGCCAGCAAAGCCGATGCGGAAGCCTCTGTGGCAGGGAAGACAAACACCGACAAGAAGGGGAGAAGTCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATTCGTGATCCGACCCGGAAGGGGATTCGGGTTTGGTTGGGGACATACGGCAGTGATATAGACGCGGCTAAGGCCTACGACTGTGCGGCGTTTAGACTGAGAGGGAGGAAAGCCGTTTTGAATTTCCCATTGGAGGCCGGAGAACCCGACCCGCCGGCGGTGTCCGGCCAGAAGAGGGGAAGGGGGCAGAAATGGAGGAATATTCCCAAGGCATTGATGGCAATGGATGAGAAGTAA

Coding sequence (CDS)

ATGGCGTCCTCAGAAGAATTCTTATCCATAGAATTCATAACCCAATTTCTGTTGGTAGATTCCTCAGATCACCAAACCCATTTCCAAACAGATTCCCCCTTTCTCCACTCCATCAAATTGGAAGATTTCATTTTCGATTCCCCAATTCCGCCATCACCGCCTCCGGCGGAAGGCTGCTACAACGACACGAAGTCCGGCAAAGTTGAAGACTGGTCGACACCGAAGACCGACATGTTGGGTCAGGCCAGCAAAGCCGATGCGGAAGCCTCTGTGGCAGGGAAGACAAACACCGACAAGAAGGGGAGAAGTCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATTCGTGATCCGACCCGGAAGGGGATTCGGGTTTGGTTGGGGACATACGGCAGTGATATAGACGCGGCTAAGGCCTACGACTGTGCGGCGTTTAGACTGAGAGGGAGGAAAGCCGTTTTGAATTTCCCATTGGAGGCCGGAGAACCCGACCCGCCGGCGGTGTCCGGCCAGAAGAGGGGAAGGGGGCAGAAATGGAGGAATATTCCCAAGGCATTGATGGCAATGGATGAGAAGTAA

Protein sequence

MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCYNDTKSGKVEDWSTPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQKRGRGQKWRNIPKALMAMDEK
Homology
[Close]
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVD---SSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAE 60
           MAS EE   +E I   LL D          F  D+ F+  +    +  +  +P   P + 
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 60

Query: 61  GCYNDT-------KSGKVEDWSTPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRR 120
               D+         G+    S+P+ +      + D     A +   +   R H+RGVRR
Sbjct: 61  VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDAR-HYRGVRR 120

Query: 121 RPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDP 180
           RPWGKFAAEIRDP +KG R+WLGT+ SD+DAA+AYDCAAF+LRGRKAVLNFPL+AG+ + 
Sbjct: 121 RPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEA 180

[Close]
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 69/155 (44.52%), Postives = 90/155 (58.06%), Query Frame = 1 

Query: 40  LEDFIFD--------------SPIPPSPPPAEGCYNDTKSGKVEDWSTPKTDMLGQASKA 99
           +EDF+FD              +P+P   P +     D+   ++       +      +  
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 DAEASVAGKTNTDKKGRSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAY 159
           + E     K     +   H+RGVRRRPWGKFAAEIRDP +KG R+WLGT+ SDIDAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQKRGR 181
           D AAF+LRGRKAVLNFPL+AG+ D P  S +KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA+ +E L+I+FI+Q LL D        +TD P L + +L +F                +
Sbjct: 1   MATKQEALAIDFISQHLLTDF----VSMETDHPSLFTNQLHNF----------------H 60

Query: 61  NDTKSGKVEDWSTPKTDMLGQAS----KADAEASVAGKTNTDKKGRSHFRGVRRRPWGKF 120
           ++T    + + S      L Q            +V+ KT  +++ R H+RGVRRRPWGK+
Sbjct: 61  SETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKTEKEEEER-HYRGVRRRPWGKY 120

Query: 121 AAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLE 165
           AAEIRDP +KG R+WLGTY + ++A +AYD AAF+LRGRKA+LNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 102 RSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNF 161
           + H+RGVR+RPWGKFAAEIRDP ++G RVWLGT+ + I+AA+AYD AAFRLRG KA+LNF
Sbjct: 153 KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNF 212

Query: 162 PLEAGEPDPPAVSGQKR 179
           PLE G+  P A  G+K+
Sbjct: 213 PLEVGKWKPRADEGEKK 229

[Close]
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.2e-24
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 1 

Query: 97  TDKKGRSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRK 156
           T+KK   H+RGVR+RPWGKFAAEIRDP RKG RVWLGT+ + I+AAKAYD AAF+LRG K
Sbjct: 140 TEKK---HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSK 199

Query: 157 AVLNFPLEA-------GEPDPPAVSGQKRGR 181
           A++NFPLE         E   PA SG+KR R
Sbjct: 200 AIVNFPLEVANFKQQDNEILQPANSGRKRMR 227

[Close]
BLAST of CmaCh16G002180 vs. TrEMBL
Match: A0A0A0KXM4_CUCSA (DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-72
Identity = 150/200 (75.00%), Postives = 158/200 (79.00%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           M SS+EFL+IEFITQFLL D SDHQT    DSPFLH IKLEDF FDSPIPP PPP E   
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPIPPLPPPPEISG 60

Query: 61  NDTKSGKVEDWST---PKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGKFA 120
           NDTK GKV D ST    + DM  QA    AE  VA    +  KGR HFRGVRRRPWGKFA
Sbjct: 61  NDTKPGKVVDPSTLPDHRPDMSTQA--CGAETKVAVVEASGGKGRRHFRGVRRRPWGKFA 120

Query: 121 AEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQK 180
           AEIRDPTRKG RVWLGTY SDIDAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPA + +K
Sbjct: 121 AEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADRK 180

Query: 181 RGRGQKWRNIPKALMAMDEK 198
           RGRGQKWRNIPKALMA +EK
Sbjct: 181 RGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmaCh16G002180 vs. TrEMBL
Match: A0A058ZWQ0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00128 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-33
Identity = 89/185 (48.11%), Postives = 111/185 (60.00%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA  +E  ++E ITQ+LL DS +           L  +K E+   D P P SP      +
Sbjct: 148 MAELDESSTLELITQYLLEDSINLAQ--------LQPVKTENLFLD-PGPDSPDSDHPTW 207

Query: 61  NDTKSGKVEDWSTPKT-----DMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGK 120
            D ++  +E  + P T       LG   K   EA  A K +        +RGVRRRPWGK
Sbjct: 208 QDLETPNLEIKAEPITLESPESELGSPEKNQDEAGSAAKAS--------YRGVRRRPWGK 267

Query: 121 FAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSG 180
           +AAEIRDPTRKG RVWLGTY +D+DAAKAYDCAAF++RGRKA+LNFPLEAG+  PP   G
Sbjct: 268 YAAEIRDPTRKGSRVWLGTYDTDVDAAKAYDCAAFKMRGRKAILNFPLEAGKSAPPPNPG 315

[Close]
BLAST of CmaCh16G002180 vs. TrEMBL
Match: B9R9Y6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-33
Identity = 90/187 (48.13%), Postives = 109/187 (58.29%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHF-QTDS----PFLHSIKLEDFIFDSPIPPSPPP 60
           MA+S+E   +E I+Q+LL D       F   DS    P L  +KLE     +  P    P
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESDNCPASSPEPKSP 60

Query: 61  AEGCYNDTKSGKVEDWSTPKTDMLGQASKADAEASVAGKTNT--DKKGRSHFRGVRRRPW 120
                      K E         LG AS+     S    +N   D++ + H+RGVRRRPW
Sbjct: 61  VSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRPW 120

Query: 121 GKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAV 180
           GKFAAEIRDP RKG RVWLGT+  D+DAAKAYDCAAFR+RGRKA+LNFPLEAG  DPP  
Sbjct: 121 GKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPKN 180

[Close]
BLAST of CmaCh16G002180 vs. TrEMBL
Match: T1QCY4_CARPA (Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-32
Identity = 87/197 (44.16%), Postives = 114/197 (57.87%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA+ EE  ++E I Q LL D S   T    DS FL +++   F F+       P      
Sbjct: 1   MATLEESSTLELIRQHLLEDFS---TDLDFDSSFLSALQ---FNFNPQYKQEEP------ 60

Query: 61  NDTKSGKVEDWSTPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGKFAAEI 120
            D+      +   P+  +   + +    AS       D + R H+RG RRRPWGKFAAEI
Sbjct: 61  -DSPISDTHNQFLPEIFLHVTSPEPGVSASCTEIMEPDGEERKHYRGXRRRPWGKFAAEI 120

Query: 121 RDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQKRGR 180
           RDP RKG R+WLGT+ SD+DAAKAYDCAAF+ RGRKA+LNFPLEAG+  PPA +G+KR R
Sbjct: 121 RDPNRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRKRRR 180

Query: 181 GQKWRNIPKALMAMDEK 198
            +K    P+     +E+
Sbjct: 181 EKKGVESPERRWVEEEE 184

[Close]
BLAST of CmaCh16G002180 vs. TrEMBL
Match: B9GK33_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11800g PE=4 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-31
Identity = 87/198 (43.94%), Postives = 119/198 (60.10%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVD--SSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEG 60
           MA+ +E  ++E I Q LL D  S+D        +    S+KLE+ +  S    SP   + 
Sbjct: 1   MATPKESSTLELIRQHLLGDFTSTDEFISNLESTVASISVKLENSLSGSE-SNSPVSDQS 60

Query: 61  CYNDTKSGKVEDWS-----TPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPW 120
            Y+  ++   E  S     TP   M   +S       +   T+ ++    H+RGVRRRPW
Sbjct: 61  YYSTQETCSFEIKSEIIDLTPPEPMFSDSSNQSPPPELVKMTDREETILRHYRGVRRRPW 120

Query: 121 GKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAV 180
           GKFAAEIRDPTRKG RVWLGT+ SDIDAA+AYDCAAF++RGRKA+LNFPLEAG    P  
Sbjct: 121 GKFAAEIRDPTRKGSRVWLGTFDSDIDAARAYDCAAFKMRGRKAILNFPLEAGLSSSPPA 180

Query: 181 SGQKRGRGQKWRNIPKAL 192
           +G+KR R ++   +P+++
Sbjct: 181 TGRKRRRVKREEVLPESV 197

[Close]
BLAST of CmaCh16G002180 vs. TAIR10
Match: AT5G07580.1 (AT5G07580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 7.5e-32
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVD---SSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAE 60
           MAS EE   +E I   LL D          F  D+ F+  +    +  +  +P   P + 
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 127

Query: 61  GCYNDT-------KSGKVEDWSTPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRR 120
               D+         G+    S+P+ +      + D     A +   +   R H+RGVRR
Sbjct: 128 VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDAR-HYRGVRR 187

Query: 121 RPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDP 180
           RPWGKFAAEIRDP +KG R+WLGT+ SD+DAA+AYDCAAF+LRGRKAVLNFPL+AG+ + 
Sbjct: 188 RPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEA 247

[Close]
BLAST of CmaCh16G002180 vs. TAIR10
Match: AT5G61590.1 (AT5G61590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 69/155 (44.52%), Postives = 90/155 (58.06%), Query Frame = 1 

Query: 40  LEDFIFD--------------SPIPPSPPPAEGCYNDTKSGKVEDWSTPKTDMLGQASKA 99
           +EDF+FD              +P+P   P +     D+   ++       +      +  
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 DAEASVAGKTNTDKKGRSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAY 159
           + E     K     +   H+RGVRRRPWGKFAAEIRDP +KG R+WLGT+ SDIDAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQKRGR 181
           D AAF+LRGRKAVLNFPL+AG+ D P  S +KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmaCh16G002180 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA+ +E L+I+FI+Q LL D        +TD P L + +L +F                +
Sbjct: 1   MATKQEALAIDFISQHLLTDF----VSMETDHPSLFTNQLHNF----------------H 60

Query: 61  NDTKSGKVEDWSTPKTDMLGQAS----KADAEASVAGKTNTDKKGRSHFRGVRRRPWGKF 120
           ++T    + + S      L Q            +V+ KT  +++ R H+RGVRRRPWGK+
Sbjct: 61  SETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKTEKEEEER-HYRGVRRRPWGKY 120

Query: 121 AAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLE 165
           AAEIRDP +KG R+WLGTY + ++A +AYD AAF+LRGRKA+LNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmaCh16G002180 vs. TAIR10
Match: AT5G47230.1 (AT5G47230.1 ethylene responsive element binding factor 5)

HSP 1 Score: 114.4 bits (285), Expect = 8.0e-26
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 102 RSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNF 161
           + H+RGVR+RPWGKFAAEIRDP ++G RVWLGT+ + I+AA+AYD AAFRLRG KA+LNF
Sbjct: 153 KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNF 212

Query: 162 PLEAGEPDPPAVSGQKR 179
           PLE G+  P A  G+K+
Sbjct: 213 PLEVGKWKPRADEGEKK 229

[Close]
BLAST of CmaCh16G002180 vs. TAIR10
Match: AT4G17490.1 (AT4G17490.1 ethylene responsive element binding factor 6)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 102 RSHFRGVRRRPWGKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNF 161
           + H+RGVR RPWGKFAAEIRDPTR+G RVWLGT+ + I+AA+AYD  AFRLRG KA+LNF
Sbjct: 134 KRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNF 193

Query: 162 PLEAGEPDPPAVSGQ 177
           PLE  + +P A  G+
Sbjct: 194 PLEVDKWNPRAEDGR 208

[Close]
BLAST of CmaCh16G002180 vs. NCBI nr
Match: gi|659107812|ref|XP_008453871.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-74
Identity = 151/200 (75.50%), Postives = 161/200 (80.50%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           M SS+EFL+IEFITQFLL D SDHQTHF TDSPFLH IKLEDF FDSPIPP PPP E   
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQTHFPTDSPFLHPIKLEDFFFDSPIPPLPPPPEISD 60

Query: 61  NDTKS-GKVEDWST-PKTDMLGQASKADAEASVAG-KTNTDKKGRSHFRGVRRRPWGKFA 120
           NDTK  GKV D ST P  DM  QA  A+  A V+  + +  K GR HFRGVRRRPWGKFA
Sbjct: 61  NDTKKPGKVVDQSTTPDPDMSTQACGAELAAKVSVVEASGGKAGRRHFRGVRRRPWGKFA 120

Query: 121 AEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQK 180
           AEIRDPTRKG RVWLGTY SDIDAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPP  + +K
Sbjct: 121 AEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPTAADRK 180

Query: 181 RGRGQKWRNIPKALMAMDEK 198
           RGRGQKWRNI KALMA +EK
Sbjct: 181 RGRGQKWRNISKALMATNEK 200

[Close]
BLAST of CmaCh16G002180 vs. NCBI nr
Match: gi|449458407|ref|XP_004146939.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 2.4e-72
Identity = 150/200 (75.00%), Postives = 158/200 (79.00%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           M SS+EFL+IEFITQFLL D SDHQT    DSPFLH IKLEDF FDSPIPP PPP E   
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPIPPLPPPPEISG 60

Query: 61  NDTKSGKVEDWST---PKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGKFA 120
           NDTK GKV D ST    + DM  QA    AE  VA    +  KGR HFRGVRRRPWGKFA
Sbjct: 61  NDTKPGKVVDPSTLPDHRPDMSTQA--CGAETKVAVVEASGGKGRRHFRGVRRRPWGKFA 120

Query: 121 AEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSGQK 180
           AEIRDPTRKG RVWLGTY SDIDAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPA + +K
Sbjct: 121 AEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADRK 180

Query: 181 RGRGQKWRNIPKALMAMDEK 198
           RGRGQKWRNIPKALMA +EK
Sbjct: 181 RGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmaCh16G002180 vs. NCBI nr
Match: gi|629079793|gb|KCW46238.1| (hypothetical protein EUGRSUZ_K00128 [Eucalyptus grandis])

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 89/185 (48.11%), Postives = 111/185 (60.00%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA  +E  ++E ITQ+LL DS +           L  +K E+   D P P SP      +
Sbjct: 148 MAELDESSTLELITQYLLEDSINLAQ--------LQPVKTENLFLD-PGPDSPDSDHPTW 207

Query: 61  NDTKSGKVEDWSTPKT-----DMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGK 120
            D ++  +E  + P T       LG   K   EA  A K +        +RGVRRRPWGK
Sbjct: 208 QDLETPNLEIKAEPITLESPESELGSPEKNQDEAGSAAKAS--------YRGVRRRPWGK 267

Query: 121 FAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSG 180
           +AAEIRDPTRKG RVWLGTY +D+DAAKAYDCAAF++RGRKA+LNFPLEAG+  PP   G
Sbjct: 268 YAAEIRDPTRKGSRVWLGTYDTDVDAAKAYDCAAFKMRGRKAILNFPLEAGKSAPPPNPG 315

[Close]
BLAST of CmaCh16G002180 vs. NCBI nr
Match: gi|702501190|ref|XP_010038413.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Eucalyptus grandis])

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 89/185 (48.11%), Postives = 111/185 (60.00%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDSPIPPSPPPAEGCY 60
           MA  +E  ++E ITQ+LL DS +           L  +K E+   D P P SP      +
Sbjct: 1   MAELDESSTLELITQYLLEDSINLAQ--------LQPVKTENLFLD-PGPDSPDSDHPTW 60

Query: 61  NDTKSGKVEDWSTPKT-----DMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGK 120
            D ++  +E  + P T       LG   K   EA  A K +        +RGVRRRPWGK
Sbjct: 61  QDLETPNLEIKAEPITLESPESELGSPEKNQDEAGSAAKAS--------YRGVRRRPWGK 120

Query: 121 FAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSG 180
           +AAEIRDPTRKG RVWLGTY +D+DAAKAYDCAAF++RGRKA+LNFPLEAG+  PP   G
Sbjct: 121 YAAEIRDPTRKGSRVWLGTYDTDVDAAKAYDCAAFKMRGRKAILNFPLEAGKSAPPPNPG 168

[Close]
BLAST of CmaCh16G002180 vs. NCBI nr
Match: gi|223550126|gb|EEF51613.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33
Identity = 90/187 (48.13%), Postives = 109/187 (58.29%), Query Frame = 1 

Query: 1   MASSEEFLSIEFITQFLLVDSSDHQTHF-QTDS----PFLHSIKLEDFIFDSPIPPSPPP 60
           MA+S+E   +E I+Q+LL D       F   DS    P L  +KLE     +  P    P
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESDNCPASSPEPKSP 60

Query: 61  AEGCYNDTKSGKVEDWSTPKTDMLGQASKADAEASVAGKTNT--DKKGRSHFRGVRRRPW 120
                      K E         LG AS+     S    +N   D++ + H+RGVRRRPW
Sbjct: 61  VSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRPW 120

Query: 121 GKFAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAV 180
           GKFAAEIRDP RKG RVWLGT+  D+DAAKAYDCAAFR+RGRKA+LNFPLEAG  DPP  
Sbjct: 121 GKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPKN 180

The following BLAST results are available for this feature:
BLAST of CmaCh16G002180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF106_ARATH1.3e-3042.63Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF10... [more]
EF107_ARATH2.8e-2844.52Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF10... [more]
EF104_ARATH3.4e-2641.07Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF10... [more]
EF102_ARATH1.4e-2466.23Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 ... [more]
ERF5_TOBAC9.2e-2463.74Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=... [more]
BLAST of CmaCh16G002180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXM4_CUCSA1.7e-7275.00DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1[more]
A0A058ZWQ0_EUCGR2.6e-3348.11Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00128 PE=4 SV=1[more]
B9R9Y6_RICCO3.4e-3348.13DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1[more]
T1QCY4_CARPA3.8e-3244.16Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1[more]
B9GK33_POPTR3.2e-3143.94Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11800g PE=4 SV=2[more]
BLAST of CmaCh16G002180 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07580.17.5e-3242.63 Integrase-type DNA-binding superfamily protein[more]
AT5G61590.11.6e-2944.52 Integrase-type DNA-binding superfamily protein[more]
AT5G61600.11.9e-2741.07 ethylene response factor 104[more]
AT5G47230.18.0e-2666.23 ethylene responsive element binding factor 5[more]
AT4G17490.11.5e-2466.67 ethylene responsive element binding factor 6[more]
BLAST of CmaCh16G002180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107812|ref|XP_008453871.1|2.0e-7475.50PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo][more]
gi|449458407|ref|XP_004146939.1|2.4e-7275.00PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus][more]
gi|629079793|gb|KCW46238.1|3.7e-3348.11hypothetical protein EUGRSUZ_K00128 [Eucalyptus grandis][more]
gi|702501190|ref|XP_010038413.1|3.7e-3348.11PREDICTED: ethylene-responsive transcription factor ERF106 [Eucalyptus grandis][more]
gi|223550126|gb|EEF51613.1|4.9e-3348.13DNA binding protein, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G002180.1CmaCh16G002180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 144..164
score: 1.1E-12coord: 105..116
score: 1.1
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 104..163
score: 1.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 103..154
score: 1.8
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 104..168
score: 1.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 104..162
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 103..164
score: 4.9
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 104..174
score: 2.1
NoneNo IPR availablePANTHERPTHR31677:SF24ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106coord: 104..174
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G002180Cucsa.094100Cucumber (Gy14) v1cgycmaB0196
CmaCh16G002180Cla010713Watermelon (97103) v1cmawmB313
CmaCh16G002180Csa4G023020Cucumber (Chinese Long) v2cmacuB332
CmaCh16G002180MELO3C017645Melon (DHL92) v3.5.1cmameB304
CmaCh16G002180ClCG07G016980Watermelon (Charleston Gray)cmawcgB302
CmaCh16G002180CSPI04G04150Wild cucumber (PI 183967)cmacpiB337
CmaCh16G002180CmoCh04G003790Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G002180CmoCh16G002360Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G002180Lsi09G004870Bottle gourd (USVL1VR-Ls)cmalsiB301
CmaCh16G002180Lsi07G001160Bottle gourd (USVL1VR-Ls)cmalsiB323
CmaCh16G002180Cp4.1LG01g03420Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G002180Cp4.1LG13g02430Cucurbita pepo (Zucchini)cmacpeB342
CmaCh16G002180MELO3C017645.2Melon (DHL92) v3.6.1cmamedB355
CmaCh16G002180CsaV3_4G004210Cucumber (Chinese Long) v3cmacucB0387
CmaCh16G002180CsaV3_5G004890Cucumber (Chinese Long) v3cmacucB0405
CmaCh16G002180Cla97C07G144030Watermelon (97103) v2cmawmbB352
CmaCh16G002180Cla97C01G004910Watermelon (97103) v2cmawmbB329
CmaCh16G002180Bhi01G002006Wax gourdcmawgoB0440
CmaCh16G002180CsGy4G004060Cucumber (Gy14) v2cgybcmaB493
CmaCh16G002180Carg16760Silver-seed gourdcarcmaB1206
CmaCh16G002180Carg08494Silver-seed gourdcarcmaB0995
CmaCh16G002180Carg08035Silver-seed gourdcarcmaB0526
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G002180CmaCh04G003610Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G002180Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G002180Wax gourdcmawgoB0410