Cp4.1LG01g03420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g03420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor
LocationCp4.1LG01 : 1823796 .. 1824389 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTTAGAAGAATTCTTCAACATTGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTACCGAAGCCCGACATGTCGGGTCAAGTCTGTCATGTCAAGGCGGAAGATGCCGTGGCAGGGACCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

mRNA sequence

ATGGCATCCTTAGAAGAATTCTTCAACATTGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTACCGAAGCCCGACATGTCGGGTCAAGTCTGTCATGTCAAGGCGGAAGATGCCGTGGCAGGGACCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Coding sequence (CDS)

ATGGCATCCTTAGAAGAATTCTTCAACATTGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTACCGAAGCCCGACATGTCGGGTCAAGTCTGTCATGTCAAGGCGGAAGATGCCGTGGCAGGGACCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Protein sequence

MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGRQKWTNVRKGLMAMNEK
Homology
[Close]
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32
Identity = 85/187 (45.45%), Postives = 114/187 (60.96%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPV 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +   +     Q   P  P +
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQ--EPDSPVL 60

Query: 61  PAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAV--AGTTGEKVK-KHFRGVRRRPW 120
             +   NE    E    S   P+++      + + +V  A    E+V  +H+RGVRRRPW
Sbjct: 61  DPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPW 120

Query: 121 GKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAV 180
           GKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + PA 
Sbjct: 121 GKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPAN 180

Query: 181 ANSKRGR 182
           +  KR R
Sbjct: 181 SGRKRKR 185

[Close]
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1 

Query: 104 KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFP 163
           +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AYD AAF+LRGRKA+LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 164 LEAGEPDPPAVANSKRGR 182
           L+AG+ D P  +  KR R
Sbjct: 165 LDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-27
Identity = 69/147 (46.94%), Postives = 93/147 (63.27%), Query Frame = 1 

Query: 43  FFFDSQITPPLPPPVPAEGSDNETK---SSEVVHP----SLPKPDMSGQVCHVKAEDAVA 102
           F FDS+++       P+  + N+ +    S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GTTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 183
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-27
Identity = 77/168 (45.83%), Postives = 101/168 (60.12%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDS---QITPPLPPPV 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  ++    IT   P P 
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSETGPRTITNQSPKP- 60

Query: 61  PAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKF 120
               + N+ K      P LP   +S  V           T  E+ ++H+RGVRRRPWGK+
Sbjct: 61  --NSTLNQRK------PPLPNLSVSRTVS--------TKTEKEEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 166
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-25
Identity = 67/155 (43.23%), Postives = 91/155 (58.71%), Query Frame = 1 

Query: 32  SSFLHPIKLEDFFFDSQITPPLPPPVPAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAE 91
           SSF +  K E   F+ +  P +     +  S  +T   E       KP ++  +   + E
Sbjct: 77  SSFFNNSKTEFDSFEFETKPNVSAARISSNSPKQTSFKE------RKPSLNIAIPMKQQE 136

Query: 92  DAVAGTTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAF 151
                      KKH+RGVR+RPWGKFAAEIRDPNRKG+RVWLGT+D+ ++AAKAYD AAF
Sbjct: 137 VVQKVEVVPTEKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAF 196

Query: 152 RLRGRKAILNFPLEAG---EPDPPAVANSKRGRQK 184
           +LRG KAI+NFPLE     + D   +  +  GR++
Sbjct: 197 KLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKR 225

[Close]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match: A0A0A0KXM4_CUCSA (DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.0e-69
Identity = 146/201 (72.64%), Postives = 158/201 (78.61%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAE 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I PPLPPP   E
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPI-PPLPPP--PE 60

Query: 61  GSDNETKSSEVVHPS-LP--KPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKF 120
            S N+TK  +VV PS LP  +PDMS Q C  + + AV   +G K ++HFRGVRRRPWGKF
Sbjct: 61  ISGNDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWGKF 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANS 180
           AAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A+ 
Sbjct: 121 AAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADR 180

Query: 181 KRGR-QKWTNVRKGLMAMNEK 198
           KRGR QKW N+ K LMA NEK
Sbjct: 181 KRGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match: T1QCY4_CARPA (Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 95/183 (51.91%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAE 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++   F F+ Q      P  P  
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQ---FNFNPQYKQE-EPDSPIS 60

Query: 61  GSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKFAAE 120
            + N+      +H + P+P +S     +   D      GE+ +KH+RG RRRPWGKFAAE
Sbjct: 61  DTHNQFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFAAE 120

Query: 121 IRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRG 180
           IRDPNRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    KR 
Sbjct: 121 IRDPNRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRKRR 169

Query: 181 RQK 184
           R+K
Sbjct: 181 REK 169

[Close]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match: B9R9Y6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-36
Identity = 97/196 (49.49%), Postives = 115/196 (58.67%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHPIKLEDFFFDSQITPPLPPPVPA 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP  L     +S   P   P   +
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHP-NLRPVKLESDNCPASSPEPKS 60

Query: 61  EGSD----NETKSSEVVHPSLPKPD--MSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRP 120
             SD          EVV P+ P+P    S  +              E+ K+H+RGVRRRP
Sbjct: 61  PVSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DPP 
Sbjct: 121 WGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPK 180

Query: 181 VANSKRGRQKWTNVRK 190
               KR R K  +V +
Sbjct: 181 NTGRKRRRVKRADVEE 195

[Close]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match: A0A067JF46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-35
Identity = 94/198 (47.47%), Postives = 119/198 (60.10%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGD---------SLDHQTHFETDSSFLHPIKLEDFFFDSQITP 60
           MA+ +E   +E I Q LLGD         +LD  +H  +    L P+KLE    D  ++ 
Sbjct: 1   MATPQESSALELIRQHLLGDFTSTDVFISNLD--SHISSLVHNLQPVKLETQ--DESLSG 60

Query: 61  PLPPPVPAEGSDNETKSSEVVHP--SLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGV 120
                  +E + + + S +  H    L   + SG     ++    A    +  KKH+RGV
Sbjct: 61  -------SESNSSVSDSFQYTHEFVDLKSQEYSGSGSVKRSSTPKAKPADDDEKKHYRGV 120

Query: 121 RRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEP 180
           RRRPWGKFAAEIRDP+RKGSRVWLGT+D+D+DAAKAYDCAAFR+RGRKAILNFPLEAG  
Sbjct: 121 RRRPWGKFAAEIRDPSRKGSRVWLGTFDTDIDAAKAYDCAAFRMRGRKAILNFPLEAGRA 180

Query: 181 DPPAVANSKRGRQKWTNV 188
           DPPA    KR R K  +V
Sbjct: 181 DPPANTGRKRRRVKREDV 187

[Close]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match: V4RKU4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005863mg PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-35
Identity = 99/205 (48.29%), Postives = 127/205 (61.95%), Query Frame = 1 

Query: 1   MASLEEFFNI-EFITQFLLGD--SLDHQTHFETDSSFLHPIKLEDFFFDSQ--------I 60
           M +LEE  +I EFI QFLLGD  SLD     + + SFL P++ E     S+        I
Sbjct: 36  MTTLEEESSILEFIRQFLLGDFTSLD-----DPNLSFLQPMESEFPVIKSEPDSPTFCEI 95

Query: 61  TPPLPPPVPAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGV 120
             P P  +   GS N T+S +                  ++E  +A T   + +KH+RGV
Sbjct: 96  IKPEPLDITCLGSSNWTESPQK-----------------RSEPKLADT---EERKHYRGV 155

Query: 121 RRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEP 180
           RRRPWGK+AAEIRDP RKGSRVWLGT+DSDVDAAKAYD AAFR+RGRKAILNFPLEAG  
Sbjct: 156 RRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 215

Query: 181 DPPAVANSKRGRQKWTNVRKGLMAM 195
            PPA  + KR R+K  ++++  +++
Sbjct: 216 SPPAKNSRKRRREKTLDLQESTISI 215

[Close]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match: AT5G07580.1 (AT5G07580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-33
Identity = 85/187 (45.45%), Postives = 114/187 (60.96%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPV 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +   +     Q   P  P +
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQ--EPDSPVL 127

Query: 61  PAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAV--AGTTGEKVK-KHFRGVRRRPW 120
             +   NE    E    S   P+++      + + +V  A    E+V  +H+RGVRRRPW
Sbjct: 128 DPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPW 187

Query: 121 GKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAV 180
           GKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + PA 
Sbjct: 188 GKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPAN 247

Query: 181 ANSKRGR 182
           +  KR R
Sbjct: 248 SGRKRKR 252

[Close]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match: AT5G61590.1 (AT5G61590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1 

Query: 104 KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFP 163
           +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AYD AAF+LRGRKA+LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 164 LEAGEPDPPAVANSKRGR 182
           L+AG+ D P  +  KR R
Sbjct: 165 LDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match: AT5G47230.1 (AT5G47230.1 ethylene responsive element binding factor 5)

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28
Identity = 69/147 (46.94%), Postives = 93/147 (63.27%), Query Frame = 1 

Query: 43  FFFDSQITPPLPPPVPAEGSDNETK---SSEVVHP----SLPKPDMSGQVCHVKAEDAVA 102
           F FDS+++       P+  + N+ +    S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GTTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 183
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 77/168 (45.83%), Postives = 101/168 (60.12%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDS---QITPPLPPPV 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  ++    IT   P P 
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSETGPRTITNQSPKP- 60

Query: 61  PAEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKF 120
               + N+ K      P LP   +S  V           T  E+ ++H+RGVRRRPWGK+
Sbjct: 61  --NSTLNQRK------PPLPNLSVSRTVS--------TKTEKEEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 166
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match: AT5G51190.1 (AT5G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 90  AEDAVAGTTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCA 149
           A    A    E  ++H+RGVRRRPWGK+AAEIRDPN+KG RVWLGT+D+ ++AA+ YD A
Sbjct: 56  AVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 115

Query: 150 AFRLRGRKAILNFPLEAGE 169
           AF+LRG KAILNFPLEAG+
Sbjct: 116 AFKLRGSKAILNFPLEAGK 134

[Close]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match: gi|659107812|ref|XP_008453871.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 8.5e-70
Identity = 147/203 (72.41%), Postives = 159/203 (78.33%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAE 60
           M S +EF  IEFITQFLLGD  DHQTHF TDS FLHPIKLEDFFFDS I PPLPPP   E
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQTHFPTDSPFLHPIKLEDFFFDSPI-PPLPPP--PE 60

Query: 61  GSDNETKS-SEVVHPSL-PKPDMSGQVC--HVKAEDAVAGTTGEKV-KKHFRGVRRRPWG 120
            SDN+TK   +VV  S  P PDMS Q C   + A+ +V   +G K  ++HFRGVRRRPWG
Sbjct: 61  ISDNDTKKPGKVVDQSTTPDPDMSTQACGAELAAKVSVVEASGGKAGRRHFRGVRRRPWG 120

Query: 121 KFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVA 180
           KFAAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP  A
Sbjct: 121 KFAAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPTAA 180

Query: 181 NSKRGR-QKWTNVRKGLMAMNEK 198
           + KRGR QKW N+ K LMA NEK
Sbjct: 181 DRKRGRGQKWRNISKALMATNEK 200

[Close]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match: gi|449458407|ref|XP_004146939.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.5e-69
Identity = 146/201 (72.64%), Postives = 158/201 (78.61%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAE 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I PPLPPP   E
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPI-PPLPPP--PE 60

Query: 61  GSDNETKSSEVVHPS-LP--KPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKF 120
            S N+TK  +VV PS LP  +PDMS Q C  + + AV   +G K ++HFRGVRRRPWGKF
Sbjct: 61  ISGNDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWGKF 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANS 180
           AAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A+ 
Sbjct: 121 AAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADR 180

Query: 181 KRGR-QKWTNVRKGLMAMNEK 198
           KRGR QKW N+ K LMA NEK
Sbjct: 181 KRGRGQKWRNIPKALMATNEK 194

[Close]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match: gi|410108801|gb|AFV60735.1| (ethylene-responsive transcription factor 3 [Carica papaya])

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 95/183 (51.91%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPAE 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++   F F+ Q      P  P  
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQ---FNFNPQYKQE-EPDSPIS 60

Query: 61  GSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKFAAE 120
            + N+      +H + P+P +S     +   D      GE+ +KH+RG RRRPWGKFAAE
Sbjct: 61  DTHNQFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFAAE 120

Query: 121 IRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRG 180
           IRDPNRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    KR 
Sbjct: 121 IRDPNRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRKRR 169

Query: 181 RQK 184
           R+K
Sbjct: 181 REK 169

[Close]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match: gi|223550126|gb|EEF51613.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 159.1 bits (401), Expect = 8.1e-36
Identity = 97/196 (49.49%), Postives = 115/196 (58.67%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHPIKLEDFFFDSQITPPLPPPVPA 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP  L     +S   P   P   +
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHP-NLRPVKLESDNCPASSPEPKS 60

Query: 61  EGSD----NETKSSEVVHPSLPKPD--MSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRP 120
             SD          EVV P+ P+P    S  +              E+ K+H+RGVRRRP
Sbjct: 61  PVSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DPP 
Sbjct: 121 WGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPK 180

Query: 181 VANSKRGRQKWTNVRK 190
               KR R K  +V +
Sbjct: 181 NTGRKRRRVKRADVEE 195

[Close]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match: gi|1000984397|ref|XP_002511011.2| (PREDICTED: ethylene-responsive transcription factor ERF106 [Ricinus communis])

HSP 1 Score: 159.1 bits (401), Expect = 8.1e-36
Identity = 97/196 (49.49%), Postives = 115/196 (58.67%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHPIKLEDFFFDSQITPPLPPPVPA 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP  L     +S   P   P   +
Sbjct: 120 MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHP-NLRPVKLESDNCPASSPEPKS 179

Query: 61  EGSD----NETKSSEVVHPSLPKPD--MSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRP 120
             SD          EVV P+ P+P    S  +              E+ K+H+RGVRRRP
Sbjct: 180 PVSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRP 239

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DPP 
Sbjct: 240 WGKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPK 299

Query: 181 VANSKRGRQKWTNVRK 190
               KR R K  +V +
Sbjct: 300 NTGRKRRRVKRADVEE 314

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g03420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF106_ARATH7.1e-3245.45Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF10... [more]
EF107_ARATH2.8e-2871.79Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF10... [more]
EF102_ARATH4.0e-2746.94Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 ... [more]
EF104_ARATH5.2e-2745.83Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF10... [more]
ERF5_TOBAC8.4e-2543.23Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=... [more]
BLAST of Cp4.1LG01g03420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXM4_CUCSA1.0e-6972.64DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1[more]
T1QCY4_CARPA1.3e-3751.91Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1[more]
B9R9Y6_RICCO5.6e-3649.49DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1[more]
A0A067JF46_JATCU6.2e-3547.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1[more]
V4RKU4_9ROSI6.2e-3548.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005863mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g03420 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07580.14.0e-3345.45 Integrase-type DNA-binding superfamily protein[more]
AT5G61590.11.6e-2971.79 Integrase-type DNA-binding superfamily protein[more]
AT5G47230.12.3e-2846.94 ethylene responsive element binding factor 5[more]
AT5G61600.13.0e-2845.83 ethylene response factor 104[more]
AT5G51190.16.2e-2665.82 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cp4.1LG01g03420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107812|ref|XP_008453871.1|8.5e-7072.41PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo][more]
gi|449458407|ref|XP_004146939.1|1.5e-6972.64PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus][more]
gi|410108801|gb|AFV60735.1|1.9e-3751.91ethylene-responsive transcription factor 3 [Carica papaya][more]
gi|223550126|gb|EEF51613.1|8.1e-3649.49DNA binding protein, putative [Ricinus communis][more]
gi|1000984397|ref|XP_002511011.2|8.1e-3649.49PREDICTED: ethylene-responsive transcription factor ERF106 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g03420.1Cp4.1LG01g03420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 145..165
score: 1.2E-12coord: 106..117
score: 1.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 105..164
score: 3.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 105..155
score: 1.3
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 105..169
score: 6.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 105..163
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 105..165
score: 1.11
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 103..173
score: 5.4
NoneNo IPR availablePANTHERPTHR31677:SF24ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106coord: 103..173
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g03420Cucsa.094100Cucumber (Gy14) v1cgycpeB0191
Cp4.1LG01g03420CmaCh16G002180Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g03420CmaCh04G003610Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g03420CmoCh16G002360Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g03420CmoCh04G003790Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g03420Cla010712Watermelon (97103) v1cpewmB421
Cp4.1LG01g03420Csa4G023020Cucumber (Chinese Long) v2cpecuB401
Cp4.1LG01g03420MELO3C017645Melon (DHL92) v3.5.1cpemeB425
Cp4.1LG01g03420ClCG01G004700Watermelon (Charleston Gray)cpewcgB372
Cp4.1LG01g03420ClCG07G016980Watermelon (Charleston Gray)cpewcgB403
Cp4.1LG01g03420CSPI04G04150Wild cucumber (PI 183967)cpecpiB398
Cp4.1LG01g03420Lsi09G004870Bottle gourd (USVL1VR-Ls)cpelsiB314
Cp4.1LG01g03420Lsi07G001160Bottle gourd (USVL1VR-Ls)cpelsiB374
Cp4.1LG01g03420MELO3C017645.2Melon (DHL92) v3.6.1cpemedB497
Cp4.1LG01g03420CsaV3_5G004890Cucumber (Chinese Long) v3cpecucB0540
Cp4.1LG01g03420CsaV3_4G004210Cucumber (Chinese Long) v3cpecucB0498
Cp4.1LG01g03420Bhi01G002005Wax gourdcpewgoB0519
Cp4.1LG01g03420CsGy4G004060Cucumber (Gy14) v2cgybcpeB503
Cp4.1LG01g03420Carg16760Silver-seed gourdcarcpeB1216
Cp4.1LG01g03420Carg08494Silver-seed gourdcarcpeB1001
Cp4.1LG01g03420Carg08035Silver-seed gourdcarcpeB0527
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g03420Cp4.1LG05g07350Cucurbita pepo (Zucchini)cpecpeB403
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g03420Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG01g03420Bottle gourd (USVL1VR-Ls)cpelsiB340
Cp4.1LG01g03420Wax gourdcpewgoB0477