CmaCh04G003610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G003610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor 3
LocationCma_Chr04 : 1803763 .. 1804344 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGGTCCCAGCGGAAAGGTCCGACAACGAGACGAAGTCTAGCGAAGTTGTCCACCCGTCGTTGCCGAAGCCCGACATGTCGGGTCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGTCACCGGCGAGAAGGTAAAGAAGCACTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCACCGGCGGTGGCGAACTCGAAGAGAGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

mRNA sequence

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGGTCCCAGCGGAAAGGTCCGACAACGAGACGAAGTCTAGCGAAGTTGTCCACCCGTCGTTGCCGAAGCCCGACATGTCGGGTCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGTCACCGGCGAGAAGGTAAAGAAGCACTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCACCGGCGGTGGCGAACTCGAAGAGAGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Coding sequence (CDS)

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGGTCCCAGCGGAAAGGTCCGACAACGAGACGAAGTCTAGCGAAGTTGTCCACCCGTCGTTGCCGAAGCCCGACATGTCGGGTCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGTCACCGGCGAGAAGGTAAAGAAGCACTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCACCGGCGGTGGCGAACTCGAAGAGAGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Protein sequence

MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGRQKWTNVRKGLMAMNEK
Homology
[Close]
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-32
Identity = 85/193 (44.04%), Postives = 111/193 (57.51%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAER 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +          I P VP + 
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWC--------IEPHVPKQE 60

Query: 61  SD----------NETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTG---EKVKKHFRG 120
            D          NE    E    S   P+++      + + +V        E   +H+RG
Sbjct: 61  PDSPVLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRG 120

Query: 121 VRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGE 178
           VRRRPWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+
Sbjct: 121 VRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK 180

[Close]
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1 

Query: 100 KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFP 159
           +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AYD AAF+LRGRKA+LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 160 LEAGEPDPPAVANSKRGR 178
           L+AG+ D P  +  KR R
Sbjct: 165 LDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.1e-28
Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSDN 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F   S+  P     +S  
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFH--SETGPRTITNQSPK 60

Query: 61  ETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDP 120
              +     P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+AAEIRDP
Sbjct: 61  PNSTLNQRKPPLPNLSVSRTVS-TKTEK-------EEEERHYRGVRRRPWGKYAAEIRDP 120

Query: 121 NRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 162
           N+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 NKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27
Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 1 

Query: 43  FFFDSQITPP----VPAERSDNETK---SSEVVHP----SLPKPDMSGQVCHVKAEDAVA 102
           F FDS+++       P+ ++ N+ +    S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GVTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 179
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.3e-26
Identity = 68/151 (45.03%), Postives = 92/151 (60.93%), Query Frame = 1 

Query: 32  SSFLHPIKLEDFFFDSQITPPVPAERSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVA 91
           SSF +  K E   F+ +  P V A R  + +          P  +++  +   +    V 
Sbjct: 77  SSFFNNSKTEFDSFEFETKPNVSAARISSNSPKQTSFKERKPSLNIAIPMKQQEVVQKVE 136

Query: 92  GVTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 151
            V  EK  KH+RGVR+RPWGKFAAEIRDPNRKG+RVWLGT+D+ ++AAKAYD AAF+LRG
Sbjct: 137 VVPTEK--KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRG 196

Query: 152 RKAILNFPLEAG---EPDPPAVANSKRGRQK 180
            KAI+NFPLE     + D   +  +  GR++
Sbjct: 197 SKAIVNFPLEVANFKQQDNEILQPANSGRKR 225

[Close]
BLAST of CmaCh04G003610 vs. TrEMBL
Match: A0A0A0KXM4_CUCSA (DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.9e-69
Identity = 143/198 (72.22%), Postives = 155/198 (78.28%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP-PVPAERSD 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I P P P E S 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPIPPLPPPPEISG 60

Query: 61  NETKSSEVVHPS-LP--KPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAE 120
           N+TK  +VV PS LP  +PDMS Q C  + + AV   +G K ++HFRGVRRRPWGKFAAE
Sbjct: 61  NDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWGKFAAE 120

Query: 121 IRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRG 180
           IRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A+ KRG
Sbjct: 121 IRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADRKRG 180

Query: 181 R-QKWTNVRKGLMAMNEK 194
           R QKW N+ K LMA NEK
Sbjct: 181 RGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmaCh04G003610 vs. TrEMBL
Match: T1QCY4_CARPA (Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-38
Identity = 93/179 (51.96%), Postives = 113/179 (63.13%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSDN 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++        Q  P  P   + N
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQFNFNPQYKQEEPDSPISDTHN 60

Query: 61  ETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDP 120
           +      +H + P+P +S     +   D      GE+ +KH+RG RRRPWGKFAAEIRDP
Sbjct: 61  QFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFAAEIRDP 120

Query: 121 NRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGRQK 180
           NRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    KR R+K
Sbjct: 121 NRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRKRRREK 169

[Close]
BLAST of CmaCh04G003610 vs. TrEMBL
Match: A0A067JF46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35
Identity = 94/194 (48.45%), Postives = 118/194 (60.82%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGD---------SLDHQTHFETDSSFLHPIKLEDFFFDSQITP 60
           MA+ +E   +E I Q LLGD         +LD  +H  +    L P+KLE     +Q   
Sbjct: 1   MATPQESSALELIRQHLLGDFTSTDVFISNLD--SHISSLVHNLQPVKLE-----TQDES 60

Query: 61  PVPAERSDNETKSSEVVHP--SLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRP 120
              +E + + + S +  H    L   + SG     ++    A    +  KKH+RGVRRRP
Sbjct: 61  LSGSESNSSVSDSFQYTHEFVDLKSQEYSGSGSVKRSSTPKAKPADDDEKKHYRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDP+RKGSRVWLGT+D+D+DAAKAYDCAAFR+RGRKAILNFPLEAG  DPPA
Sbjct: 121 WGKFAAEIRDPSRKGSRVWLGTFDTDIDAAKAYDCAAFRMRGRKAILNFPLEAGRADPPA 180

Query: 181 VANSKRGRQKWTNV 184
               KR R K  +V
Sbjct: 181 NTGRKRRRVKREDV 187

[Close]
BLAST of CmaCh04G003610 vs. TrEMBL
Match: B9R9Y6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35
Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHP----IKLE-DFFFDSQITPPVP 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP    +KLE D    S   P  P
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESDNCPASSPEPKSP 60

Query: 61  AERSDNETKSS--EVVHPSLPKP-DMSGQVCHVKAEDAVAGVTG-EKVKKHFRGVRRRPW 120
                     +  EVV P+ P+P  ++ +  + ++    +     E+ K+H+RGVRRRPW
Sbjct: 61  VSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRPW 120

Query: 121 GKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAV 180
           GKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DPP  
Sbjct: 121 GKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPKN 180

Query: 181 ANSKRGRQKWTNVRK 186
              KR R K  +V +
Sbjct: 181 TGRKRRRVKRADVEE 195

[Close]
BLAST of CmaCh04G003610 vs. TrEMBL
Match: W9QXG7_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_001232 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.1e-35
Identity = 91/192 (47.40%), Postives = 118/192 (61.46%), Query Frame = 1 

Query: 4   LEEFFN----IEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSD 63
           +E+F N    +E I Q+LLGD    +T F + S   +  K+    F S    PV  E S 
Sbjct: 1   MEDFLNESSTLELIRQYLLGDFTSSETLFTSFSPTSNTSKIN--MFSSYDLQPVKHEYSP 60

Query: 64  NETKSSEVVHPSLPKPDMSGQVCHVKAEDAV------------AGVTGEKVKKHFRGVRR 123
           +E++ +  V  S+PKPD         A D +            +  +GE+  + +RGVRR
Sbjct: 61  SESEPNSPV--SMPKPDAPMSKTAFSAADVMTTDTLVTTKTSSSSCSGER--RRYRGVRR 120

Query: 124 RPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDP 180
           RPWGKFAAEIRDPNRKGSRVWLGT+D+DVDAA+AYDCAAF++RGRKAILNFPLEAG  +P
Sbjct: 121 RPWGKFAAEIRDPNRKGSRVWLGTFDTDVDAARAYDCAAFKMRGRKAILNFPLEAGMSEP 180

[Close]
BLAST of CmaCh04G003610 vs. TAIR10
Match: AT5G07580.1 (AT5G07580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-33
Identity = 85/193 (44.04%), Postives = 111/193 (57.51%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAER 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +          I P VP + 
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWC--------IEPHVPKQE 127

Query: 61  SD----------NETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTG---EKVKKHFRG 120
            D          NE    E    S   P+++      + + +V        E   +H+RG
Sbjct: 128 PDSPVLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRG 187

Query: 121 VRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGE 178
           VRRRPWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+
Sbjct: 188 VRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK 247

[Close]
BLAST of CmaCh04G003610 vs. TAIR10
Match: AT5G61590.1 (AT5G61590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1 

Query: 100 KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFP 159
           +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AYD AAF+LRGRKA+LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 160 LEAGEPDPPAVANSKRGR 178
           L+AG+ D P  +  KR R
Sbjct: 165 LDAGKYDAPVNSCRKRRR 182

[Close]
BLAST of CmaCh04G003610 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 125.6 bits (314), Expect = 3.4e-29
Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSDN 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F   S+  P     +S  
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFH--SETGPRTITNQSPK 60

Query: 61  ETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDP 120
              +     P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+AAEIRDP
Sbjct: 61  PNSTLNQRKPPLPNLSVSRTVS-TKTEK-------EEEERHYRGVRRRPWGKYAAEIRDP 120

Query: 121 NRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 162
           N+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 NKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of CmaCh04G003610 vs. TAIR10
Match: AT5G47230.1 (AT5G47230.1 ethylene responsive element binding factor 5)

HSP 1 Score: 124.0 bits (310), Expect = 9.9e-29
Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 1 

Query: 43  FFFDSQITPP----VPAERSDNETK---SSEVVHP----SLPKPDMSGQVCHVKAEDAVA 102
           F FDS+++       P+ ++ N+ +    S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GVTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 179
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]
BLAST of CmaCh04G003610 vs. TAIR10
Match: AT5G51190.1 (AT5G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-26
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 86  AEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCA 145
           A    A V  E  ++H+RGVRRRPWGK+AAEIRDPN+KG RVWLGT+D+ ++AA+ YD A
Sbjct: 56  AVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 115

Query: 146 AFRLRGRKAILNFPLEAGE 165
           AF+LRG KAILNFPLEAG+
Sbjct: 116 AFKLRGSKAILNFPLEAGK 134

[Close]
BLAST of CmaCh04G003610 vs. NCBI nr
Match: gi|659107812|ref|XP_008453871.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 4.2e-69
Identity = 144/200 (72.00%), Postives = 156/200 (78.00%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP-PVPAERSD 60
           M S +EF  IEFITQFLLGD  DHQTHF TDS FLHPIKLEDFFFDS I P P P E SD
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQTHFPTDSPFLHPIKLEDFFFDSPIPPLPPPPEISD 60

Query: 61  NETKS-SEVVHPSL-PKPDMSGQVC--HVKAEDAVAGVTGEKV-KKHFRGVRRRPWGKFA 120
           N+TK   +VV  S  P PDMS Q C   + A+ +V   +G K  ++HFRGVRRRPWGKFA
Sbjct: 61  NDTKKPGKVVDQSTTPDPDMSTQACGAELAAKVSVVEASGGKAGRRHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP  A+ K
Sbjct: 121 AEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPTAADRK 180

Query: 181 RGR-QKWTNVRKGLMAMNEK 194
           RGR QKW N+ K LMA NEK
Sbjct: 181 RGRGQKWRNISKALMATNEK 200

[Close]
BLAST of CmaCh04G003610 vs. NCBI nr
Match: gi|449458407|ref|XP_004146939.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 7.1e-69
Identity = 143/198 (72.22%), Postives = 155/198 (78.28%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP-PVPAERSD 60
           M S +EF  IEFITQFLLGD  DHQT    DS FLHPIKLEDFFFDS I P P P E S 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQT----DSPFLHPIKLEDFFFDSPIPPLPPPPEISG 60

Query: 61  NETKSSEVVHPS-LP--KPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAE 120
           N+TK  +VV PS LP  +PDMS Q C  + + AV   +G K ++HFRGVRRRPWGKFAAE
Sbjct: 61  NDTKPGKVVDPSTLPDHRPDMSTQACGAETKVAVVEASGGKGRRHFRGVRRRPWGKFAAE 120

Query: 121 IRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRG 180
           IRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA A+ KRG
Sbjct: 121 IRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAADRKRG 180

Query: 181 R-QKWTNVRKGLMAMNEK 194
           R QKW N+ K LMA NEK
Sbjct: 181 RGQKWRNIPKALMATNEK 194

[Close]
BLAST of CmaCh04G003610 vs. NCBI nr
Match: gi|410108801|gb|AFV60735.1| (ethylene-responsive transcription factor 3 [Carica papaya])

HSP 1 Score: 166.0 bits (419), Expect = 6.5e-38
Identity = 93/179 (51.96%), Postives = 113/179 (63.13%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPVPAERSDN 60
           MA+LEE   +E I Q LL D     T  + DSSFL  ++        Q  P  P   + N
Sbjct: 1   MATLEESSTLELIRQHLLED---FSTDLDFDSSFLSALQFNFNPQYKQEEPDSPISDTHN 60

Query: 61  ETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFAAEIRDP 120
           +      +H + P+P +S     +   D      GE+ +KH+RG RRRPWGKFAAEIRDP
Sbjct: 61  QFLPEIFLHVTSPEPGVSASCTEIMEPD------GEE-RKHYRGXRRRPWGKFAAEIRDP 120

Query: 121 NRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGRQK 180
           NRKGSR+WLGT+DSDVDAAKAYDCAAF+ RGRKAILNFPLEAG+  PPA    KR R+K
Sbjct: 121 NRKGSRIWLGTFDSDVDAAKAYDCAAFKFRGRKAILNFPLEAGKCGPPATTGRKRRREK 169

[Close]
BLAST of CmaCh04G003610 vs. NCBI nr
Match: gi|802769972|ref|XP_012090504.1| (PREDICTED: ethylene-responsive transcription factor ERF106 [Jatropha curcas])

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-35
Identity = 94/194 (48.45%), Postives = 118/194 (60.82%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGD---------SLDHQTHFETDSSFLHPIKLEDFFFDSQITP 60
           MA+ +E   +E I Q LLGD         +LD  +H  +    L P+KLE     +Q   
Sbjct: 1   MATPQESSALELIRQHLLGDFTSTDVFISNLD--SHISSLVHNLQPVKLE-----TQDES 60

Query: 61  PVPAERSDNETKSSEVVHP--SLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRP 120
              +E + + + S +  H    L   + SG     ++    A    +  KKH+RGVRRRP
Sbjct: 61  LSGSESNSSVSDSFQYTHEFVDLKSQEYSGSGSVKRSSTPKAKPADDDEKKHYRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDP+RKGSRVWLGT+D+D+DAAKAYDCAAFR+RGRKAILNFPLEAG  DPPA
Sbjct: 121 WGKFAAEIRDPSRKGSRVWLGTFDTDIDAAKAYDCAAFRMRGRKAILNFPLEAGRADPPA 180

Query: 181 VANSKRGRQKWTNV 184
               KR R K  +V
Sbjct: 181 NTGRKRRRVKREDV 187

[Close]
BLAST of CmaCh04G003610 vs. NCBI nr
Match: gi|223550126|gb|EEF51613.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-35
Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHF-ETDSSFLHP----IKLE-DFFFDSQITPPVP 60
           MA+ +E   +E I+Q+LLGD       F   DS+  HP    +KLE D    S   P  P
Sbjct: 1   MATSQESSVLELISQYLLGDFPSADIFFCNLDSTLAHPNLRPVKLESDNCPASSPEPKSP 60

Query: 61  AERSDNETKSS--EVVHPSLPKP-DMSGQVCHVKAEDAVAGVTG-EKVKKHFRGVRRRPW 120
                     +  EVV P+ P+P  ++ +  + ++    +     E+ K+H+RGVRRRPW
Sbjct: 61  VSDLIQYAHDAKPEVVEPTPPQPLGLASRPINRQSPPPDSNARDDEEEKRHYRGVRRRPW 120

Query: 121 GKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAV 180
           GKFAAEIRDPNRKGSRVWLGT+D DVDAAKAYDCAAFR+RGRKAILNFPLEAG  DPP  
Sbjct: 121 GKFAAEIRDPNRKGSRVWLGTFDRDVDAAKAYDCAAFRMRGRKAILNFPLEAGLADPPKN 180

Query: 181 ANSKRGRQKWTNVRK 186
              KR R K  +V +
Sbjct: 181 TGRKRRRVKRADVEE 195

The following BLAST results are available for this feature:
BLAST of CmaCh04G003610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF106_ARATH4.1e-3244.04Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF10... [more]
EF107_ARATH2.7e-2871.79Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF10... [more]
EF104_ARATH6.1e-2846.58Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF10... [more]
EF102_ARATH1.8e-2746.94Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 ... [more]
ERF5_TOBAC4.3e-2645.03Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=... [more]
BLAST of CmaCh04G003610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXM4_CUCSA4.9e-6972.22DNA binding protein OS=Cucumis sativus GN=Csa_4G023020 PE=4 SV=1[more]
T1QCY4_CARPA4.5e-3851.96Ethylene-responsive transcription factor 3 OS=Carica papaya GN=ERF3 PE=2 SV=1[more]
A0A067JF46_JATCU2.7e-3548.45Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26298 PE=4 SV=1[more]
B9R9Y6_RICCO2.7e-3549.74DNA binding protein, putative OS=Ricinus communis GN=RCOM_1501800 PE=4 SV=1[more]
W9QXG7_9ROSA6.1e-3547.40Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_001232 PE=4 ... [more]
BLAST of CmaCh04G003610 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07580.12.3e-3344.04 Integrase-type DNA-binding superfamily protein[more]
AT5G61590.11.5e-2971.79 Integrase-type DNA-binding superfamily protein[more]
AT5G61600.13.4e-2946.58 ethylene response factor 104[more]
AT5G47230.19.9e-2946.94 ethylene responsive element binding factor 5[more]
AT5G51190.12.1e-2667.09 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmaCh04G003610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107812|ref|XP_008453871.1|4.2e-6972.00PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis melo][more]
gi|449458407|ref|XP_004146939.1|7.1e-6972.22PREDICTED: ethylene-responsive transcription factor ERF106 [Cucumis sativus][more]
gi|410108801|gb|AFV60735.1|6.5e-3851.96ethylene-responsive transcription factor 3 [Carica papaya][more]
gi|802769972|ref|XP_012090504.1|3.9e-3548.45PREDICTED: ethylene-responsive transcription factor ERF106 [Jatropha curcas][more]
gi|223550126|gb|EEF51613.1|3.9e-3549.74DNA binding protein, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G003610.1CmaCh04G003610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 102..113
score: 1.2E-12coord: 141..161
score: 1.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 101..160
score: 3.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 101..151
score: 1.3
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 101..165
score: 6.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 101..159
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 101..161
score: 1.11
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 99..169
score: 5.4
NoneNo IPR availablePANTHERPTHR31677:SF24ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106coord: 99..169
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G003610Cucsa.094100Cucumber (Gy14) v1cgycmaB0203
CmaCh04G003610Cla010713Watermelon (97103) v1cmawmB693
CmaCh04G003610Csa4G023020Cucumber (Chinese Long) v2cmacuB710
CmaCh04G003610Csa5G167110Cucumber (Chinese Long) v2cmacuB745
CmaCh04G003610MELO3C017645Melon (DHL92) v3.5.1cmameB702
CmaCh04G003610ClCG07G016980Watermelon (Charleston Gray)cmawcgB669
CmaCh04G003610ClCG01G004700Watermelon (Charleston Gray)cmawcgB637
CmaCh04G003610CSPI05G07450Wild cucumber (PI 183967)cmacpiB754
CmaCh04G003610CSPI04G04150Wild cucumber (PI 183967)cmacpiB716
CmaCh04G003610CmoCh16G002360Cucurbita moschata (Rifu)cmacmoB701
CmaCh04G003610CmoCh04G003790Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G003610Lsi09G004870Bottle gourd (USVL1VR-Ls)cmalsiB625
CmaCh04G003610Lsi07G001160Bottle gourd (USVL1VR-Ls)cmalsiB696
CmaCh04G003610Cp4.1LG01g03420Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G003610MELO3C017645.2Melon (DHL92) v3.6.1cmamedB791
CmaCh04G003610CsaV3_5G004890Cucumber (Chinese Long) v3cmacucB0882
CmaCh04G003610CsaV3_4G004210Cucumber (Chinese Long) v3cmacucB0842
CmaCh04G003610Cla97C01G004910Watermelon (97103) v2cmawmbB707
CmaCh04G003610Cla97C07G144030Watermelon (97103) v2cmawmbB775
CmaCh04G003610Bhi01G002005Wax gourdcmawgoB0854
CmaCh04G003610CsGy5G004900Cucumber (Gy14) v2cgybcmaB671
CmaCh04G003610CsGy4G004060Cucumber (Gy14) v2cgybcmaB542
CmaCh04G003610Carg16760Silver-seed gourdcarcmaB1209
CmaCh04G003610Carg08035Silver-seed gourdcarcmaB0529
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G003610CmaCh16G002180Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G003610Cucurbita pepo (Zucchini)cmacpeB715