CmoCh02G009910 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G009910
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor 5
LocationCmo_Chr02 : 6090085 .. 6090810 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTACGGCGACGACGCTTCGACCTTAGATTTCATCAGACAACACCTTCTCAGCGACTTCAACTCCATTGAAGCCTTCGCTTCAAATCTCGATTTCATCAACAATAATGGACTCACACCTCAAATCCCCGCTGCCCCTTCAAAGATCGGTCACCGCCGTCCCTCTCTCAACGTCATGATTCCACCCAAGACCCACTCTGTCCAATCCCCTGCGGCAGCGACGGCGACGGTTACGACATCTTCTGAGGTAAAATCCGATGTGGGCCTGAGTCAGCATTACAGGGGGGTTCGCCGGCGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCCAACAAACGTGGAGCTCGTGTTTGGCTTGGAACTTACGATACCGCAATTGAAGCTGCCAAAGCTTATGATAGAGCTGCTTTTAAGATGAGAGGAAGTAAGGCGATTTTGAATTTTCCTCTTGAGGCTGGAAAGGAAGCAGAGGAGCCGCCGTCCACGGCAGCTGTTGGCCGGAAAAGGAGGAGGGAGAGTGAGGTTGGGGAAATGGAGAATAAGGTTGTGAAGAAGGAGGAGTCGTCGGAAACAAATGAAATCGGAGTTCCGGCGGCCATTTGTCCTCTAACGCCGTCTTGTTGGGCGCCGGTTTGGGACAATGATGGGAAGGGGATCTTCAGCGTGCCGCCGTTATCGCCTCATCCGTTAATGGGATATCCTCAATGCACCGTCACATAA

mRNA sequence

ATGGCTTACGGCGACGACGCTTCGACCTTAGATTTCATCAGACAACACCTTCTCAGCGACTTCAACTCCATTGAAGCCTTCGCTTCAAATCTCGATTTCATCAACAATAATGGACTCACACCTCAAATCCCCGCTGCCCCTTCAAAGATCGGTCACCGCCGTCCCTCTCTCAACGTCATGATTCCACCCAAGACCCACTCTGTCCAATCCCCTGCGGCAGCGACGGCGACGGTTACGACATCTTCTGAGGTAAAATCCGATGTGGGCCTGAGTCAGCATTACAGGGGGGTTCGCCGGCGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCCAACAAACGTGGAGCTCGTGTTTGGCTTGGAACTTACGATACCGCAATTGAAGCTGCCAAAGCTTATGATAGAGCTGCTTTTAAGATGAGAGGAAGTAAGGCGATTTTGAATTTTCCTCTTGAGGCTGGAAAGGAAGCAGAGGAGCCGCCGTCCACGGCAGCTGTTGGCCGGAAAAGGAGGAGGGAGAGTGAGGTTGGGGAAATGGAGAATAAGGTTGTGAAGAAGGAGGAGTCGTCGGAAACAAATGAAATCGGAGTTCCGGCGGCCATTTGTCCTCTAACGCCGTCTTGTTGGGCGCCGGTTTGGGACAATGATGGGAAGGGGATCTTCAGCGTGCCGCCGTTATCGCCTCATCCGTTAATGGGATATCCTCAATGCACCGTCACATAA

Coding sequence (CDS)

ATGGCTTACGGCGACGACGCTTCGACCTTAGATTTCATCAGACAACACCTTCTCAGCGACTTCAACTCCATTGAAGCCTTCGCTTCAAATCTCGATTTCATCAACAATAATGGACTCACACCTCAAATCCCCGCTGCCCCTTCAAAGATCGGTCACCGCCGTCCCTCTCTCAACGTCATGATTCCACCCAAGACCCACTCTGTCCAATCCCCTGCGGCAGCGACGGCGACGGTTACGACATCTTCTGAGGTAAAATCCGATGTGGGCCTGAGTCAGCATTACAGGGGGGTTCGCCGGCGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCCAACAAACGTGGAGCTCGTGTTTGGCTTGGAACTTACGATACCGCAATTGAAGCTGCCAAAGCTTATGATAGAGCTGCTTTTAAGATGAGAGGAAGTAAGGCGATTTTGAATTTTCCTCTTGAGGCTGGAAAGGAAGCAGAGGAGCCGCCGTCCACGGCAGCTGTTGGCCGGAAAAGGAGGAGGGAGAGTGAGGTTGGGGAAATGGAGAATAAGGTTGTGAAGAAGGAGGAGTCGTCGGAAACAAATGAAATCGGAGTTCCGGCGGCCATTTGTCCTCTAACGCCGTCTTGTTGGGCGCCGGTTTGGGACAATGATGGGAAGGGGATCTTCAGCGTGCCGCCGTTATCGCCTCATCCGTTAATGGGATATCCTCAATGCACCGTCACATAA
Homology
[Close]
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 111/239 (46.44%), Postives = 145/239 (60.67%), Query Frame = 1 

Query: 6   DASTLDFIRQHLLSDFNSIEAFASNLDFINNNGLTPQIPAAPSKIGHRRPSLNVMIPPKT 65
           D S LD I QHLL+DF S++ FAS +     + L+ + P                     
Sbjct: 12  DQSALDLITQHLLTDFPSLDTFASTIHHCTTSTLSQRKP--------------------- 71

Query: 66  HSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYD 125
                P A  A  TT+  V+ +    +HYRGVRRRPWGK+AAEIRDPNK+G RVWLGT+D
Sbjct: 72  -----PLATIAVPTTAPVVQEND--QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFD 131

Query: 126 TAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVV 185
           TA+EAA+ YD+AAFK+RGSKAILNFPLEAGK  +   +   +  K +R+ +V E E++++
Sbjct: 132 TAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTEDESQLI 191

Query: 186 KKEESSETNEIGVPAAICPLTPSCWAPVWDN-DGK--GIFSVPPLSPHPLMGYPQCTVT 242
            + ++ +  E  V A  CPLTPS W   WD  D K  GIFSVP LSP P +G+ Q  VT
Sbjct: 192 SR-KAVKREEAQVQADACPLTPSSWKGFWDGADSKDMGIFSVPLLSPCPSLGHSQLVVT 221

[Close]
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.9e-45
Identity = 130/300 (43.33%), Postives = 154/300 (51.33%), Query Frame = 1 

Query: 5   DDASTLDFIRQHLLSD-----------------------FNSIE---------------- 64
           ++ +TLD IRQHLL D                        NSI                 
Sbjct: 6   ENCTTLDLIRQHLLDDNVFMEHYCPQPILYSQSSSSSESLNSIASELNNETFSFEPTLKY 65

Query: 65  ---AFASNLD---FINNNGLT---------PQIPAA--------PSKIGHRRPSLNVMIP 124
              A +SNLD   F NN+            P + AA         +    R+PSLN+ IP
Sbjct: 66  ADTAQSSNLDISSFFNNSKTEFDSFEFETKPNVSAARISSNSPKQTSFKERKPSLNIAIP 125

Query: 125 PKTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLG 184
            K   V        T              +HYRGVR+RPWGKFAAEIRDPN++G RVWLG
Sbjct: 126 MKQQEVVQKVEVVPTE------------KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLG 185

Query: 185 TYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAG---KEAEEPPSTAAVGRKRRRESEVGE 238
           T+DTAIEAAKAYDRAAFK+RGSKAI+NFPLE     ++  E    A  GRKR RE+E  E
Sbjct: 186 TFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRETENEE 245

[Close]
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 112/246 (45.53%), Postives = 146/246 (59.35%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEA-----FASNL-DFINNNG---LTPQIPAAPSKIG 60
           MA   +A  +DFI QHLL+DF S+E      F + L +F +  G   +T Q P   S + 
Sbjct: 1   MATKQEALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLN 60

Query: 61  HRRPSLNVMIPPKTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRD 120
            R+P L  +            + + TV+T +E + +    +HYRGVRRRPWGK+AAEIRD
Sbjct: 61  QRKPPLPNL------------SVSRTVSTKTEKEEE---ERHYRGVRRRPWGKYAAEIRD 120

Query: 121 PNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVG--- 180
           PNK+G R+WLGTYDTA+EA +AYD+AAF++RG KAILNFPL+    +E       +G   
Sbjct: 121 PNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGK 180

Query: 181 RKRRRESEVGEMENKVVKKEE----SSETNEIGVPAAICPLTPSCWAPVWD-NDGKGIFS 230
           RKR + S   E +   VK EE    +SET E  V   + PLTPS W   WD   G GIFS
Sbjct: 181 RKRDKGSPPEEEKAARVKVEEEESNTSETTEAEVEPVV-PLTPSSWMGFWDVGAGDGIFS 230

[Close]
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 120/284 (42.25%), Postives = 146/284 (51.41%), Query Frame = 1 

Query: 5   DDASTLDFIRQHLLSDFNSIEAF------------------------------------- 64
           ++++TLD IRQHLL D   +E +                                     
Sbjct: 6   ENSTTLDLIRQHLLDDNVFLEHYCSETETTTLIYSQSSSSSESLDQSFSFEPTLNYATTA 65

Query: 65  -ASNLD---FINNN---------GLTPQIPAAPSK------IGHRRPSLNVMIPPKTHSV 124
            +SNL+   F NN+         G  P + AA S          R+PSLN+ IP K   V
Sbjct: 66  QSSNLEVSTFFNNSKTEFDSFEFGTIPNVSAARSSSLKQTSFKERKPSLNIAIPVKQEVV 125

Query: 125 QSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAI 184
           Q    A                 +HYRGVR+RPWGKFAAEIRDPN++G RVWLGT+DTAI
Sbjct: 126 QKVELAPTE-------------KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAI 185

Query: 185 EAAKAYDRAAFKMRGSKAILNFPLEAG--KEAEEPPSTAAVGRKRRRESEVGEMENKVVK 230
           EAAKAYDRAA+K+RGSKAI+NFPLE    K+         V   R+R  E    E  V+ 
Sbjct: 186 EAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNNEIRPLVNSSRKRVRETVNEEQLVIN 245

[Close]
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-37
Identity = 103/225 (45.78%), Postives = 133/225 (59.11%), Query Frame = 1 

Query: 20  DFNSIEAFASNLDFINNNGLTPQI-PAAPSKIGHRRPSLNVMIPPKTHSVQSPAAATATV 79
           +F+S E   S+ DF  +N    Q  P   S+I  R+P L + +P KT  +Q  A  T   
Sbjct: 87  EFDS-EVSVSDFDFKPSNQNQNQFEPELKSQI--RKPPLKISLPAKTEWIQFAAENTKPE 146

Query: 80  TTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAA 139
            T    + +    +HYRGVR+RPWGKFAAEIRDPNKRG+RVWLGT+DTAIEAA+AYD AA
Sbjct: 147 VTKPVSEEE---KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAA 206

Query: 140 FKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVVKKEESSETNEIGV 199
           F++RGSKAILNFPLE GK   +P +     +++R + E   +  KV+K E+S + N    
Sbjct: 207 FRLRGSKAILNFPLEVGK--WKPRADEGEKKRKRDDDEKVTVVEKVLKTEQSVDVN---- 266

Query: 200 PAAICPLTPSCWAPVWDNDGKGIFSVP---PLSPHPLMGYPQCTV 241
                P   S    + D D  G  + P   PLSPHP  GY Q TV
Sbjct: 267 GGETFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTV 299

[Close]
BLAST of CmoCh02G009910 vs. TrEMBL
Match: A0A0A0KKV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G167120 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.5e-94
Identity = 182/239 (76.15%), Postives = 202/239 (84.52%), Query Frame = 1 

Query: 5   DDASTLDFIRQHLLSDFNSIEAFASNLDFINNNGLTPQIPA-APSKIGHRRPSLNVMIPP 64
           DDASTLD IRQHLL+DFNSIEAFASNL+F +N+G+  QI +  PSK+  RRPSLNV IPP
Sbjct: 2   DDASTLDLIRQHLLNDFNSIEAFASNLNFDHNSGVNSQISSPTPSKVAPRRPSLNVAIPP 61

Query: 65  KTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGT 124
           K+ SV S       V TS E KSDVG+S+HYRGVRRRPWGKFAAEIRDP KRGARVWLGT
Sbjct: 62  KSISVGS------AVETSIEAKSDVGVSRHYRGVRRRPWGKFAAEIRDPAKRGARVWLGT 121

Query: 125 YDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRR--ESEVGEME 184
           YDTAIEAAKAYDRAAF+MRGSKAILNFPLEAGK+ E+P ST+ VGRKRRR  ESEV EM 
Sbjct: 122 YDTAIEAAKAYDRAAFRMRGSKAILNFPLEAGKDVEDPQSTSDVGRKRRRESESEVVEMG 181

Query: 185 NKVVKKEESSETNEIGVPAAICPLTPSCWAPVWDNDGKGIFSVPPLSPHPLMGYPQCTV 241
            K +KKEE SET EIGVP  +CPLTPSCWA VWD+DGKGIF+VPPLSP+PLMG+PQCTV
Sbjct: 182 KKEMKKEERSETEEIGVPTTVCPLTPSCWASVWDSDGKGIFNVPPLSPYPLMGHPQCTV 234

[Close]
BLAST of CmoCh02G009910 vs. TrEMBL
Match: D8VD38_ACTDE (Ethylene response factor 11 OS=Actinidia deliciosa GN=ERF11 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.8e-56
Identity = 136/275 (49.45%), Postives = 159/275 (57.82%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEAFASNLD-------FINNNGLT------------- 60
           MA  D+ S L+ IRQHLL DF   E+F +N D       F+N    T             
Sbjct: 1   MALPDETSALELIRQHLLDDFAFAESFITNFDPSSSSNSFVNQFSQTSSSESTGSCKIEL 60

Query: 61  --------PQIPAA---PSKIGHRRPSLNVMIPPKTHSVQSPAAATATVTTSSEVKSDVG 120
                   PQI      PSK   RRPSLN+ +P     +Q            +  ++D G
Sbjct: 61  DSFEFETRPQINITSPKPSKFSERRPSLNISVPAAKLKIQGADFCGGVPPREAAEEADSG 120

Query: 121 LSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILN 180
             +HYRGVRRRPWGKFAAEIR+PN+RGARVWLGT+DTA+EAAKAYDRAAFK+RGSKAILN
Sbjct: 121 ERRHYRGVRRRPWGKFAAEIRNPNRRGARVWLGTFDTAVEAAKAYDRAAFKLRGSKAILN 180

Query: 181 FPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVVKKEESSETNEIGVPAAICPLTPSC 240
           FP E G   E  P  A   RKRRRE E  E E + VK+E++ E  E     A+ PLTPS 
Sbjct: 181 FPHEIGSSPESFP-PADTRRKRRREDESEEREKREVKREKAEEEEEAEGVTAVAPLTPSN 240

[Close]
BLAST of CmoCh02G009910 vs. TrEMBL
Match: F6I2P6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g01110 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.9e-51
Identity = 125/250 (50.00%), Postives = 161/250 (64.40%), Query Frame = 1 

Query: 4   GDDASTLDFIRQHLLSDFNSIEAFASNLDF-----INNNGLTPQIPAAPSKIGHRRPSLN 63
           G++AS+L  I Q LLSDF+S+E F S+         +++    + P  PS++ HRRP L+
Sbjct: 2   GEEASSLQLIHQLLLSDFDSMETFVSHASHSLRSSASDSSFQTESPK-PSRLSHRRPPLS 61

Query: 64  VMIPPKTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGAR 123
           + +PP   S            TSS +  D G  +HYRGVRRRPWGKFAAEIRDPN+RG+R
Sbjct: 62  ISLPPPPIS-----------HTSSSL--DSGERRHYRGVRRRPWGKFAAEIRDPNRRGSR 121

Query: 124 VWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVG 183
           VWLGT++TAIEAA+AYDRAAFKMRGSKA+LNFPLEAG  ++  P   ++ RKR RESE  
Sbjct: 122 VWLGTFETAIEAARAYDRAAFKMRGSKAVLNFPLEAGNWSDSDPPATSI-RKRERESESE 181

Query: 184 EMEN---KVVKKEESSETNEIGVPAAIC------PLTPSCWAPVW-DNDGKGIFSVP--- 236
           E E    KV+K+EE+   ++  V A         PLTPS W  VW + D +G F +P   
Sbjct: 182 EREQPEIKVLKQEEAPPASDSPVVAEAANVLEASPLTPSSWRTVWEERDMEGAFHLPPLT 236

[Close]
BLAST of CmoCh02G009910 vs. TrEMBL
Match: F6I2P2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g01000 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 134/279 (48.03%), Postives = 164/279 (58.78%), Query Frame = 1 

Query: 6   DASTLDFIRQHLLSDFNSIEAFASNL---------------------DFIN--------- 65
           +AS L FI QHLLSDF S+E F  N+                     D+           
Sbjct: 4   EASALHFIHQHLLSDFESLETFVVNVNELSQTSSPESGVSTTDVEVSDYFKVHDDECSTS 63

Query: 66  -NNGLTPQIPAAP--SKIGHRRPSLNVMIPPKTHSVQSPAAATATVTTSSEVKSDVGLSQ 125
            ++GL      +P  SK+ HRRPSL + +PP     Q PA            +SD G ++
Sbjct: 64  TSSGLFQFETKSPKLSKLSHRRPSLCISVPPPPIP-QLPA------------ESDPGDAR 123

Query: 126 HYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPL 185
           HYRGVRRRPWGKFAAEIRDPN+RG+RVWLGT++TAIEAA+AYDRAAFKMRGSKAILNFPL
Sbjct: 124 HYRGVRRRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAARAYDRAAFKMRGSKAILNFPL 183

Query: 186 EAGKEAEEPPSTAAVGRKRRRESEVGE---MENKVVKKEESSETNEIGVPAA----ICPL 241
           EAG  +   P T   GRKR+RE E GE    E KV+K+EE    ++  + AA    I PL
Sbjct: 184 EAGNLSCSDP-TVISGRKRQRECESGEREQAETKVLKQEEQLPDSDCNLAAASVFGISPL 243

[Close]
BLAST of CmoCh02G009910 vs. TrEMBL
Match: B9NBQ9_POPTR (Ethylene-responsive element-binding family protein OS=Populus trichocarpa GN=POPTR_0003s15040g PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 133/293 (45.39%), Postives = 166/293 (56.66%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEAFASNL-------------DFIN---------NNG 60
           MA  D+AS L+ IR+HLL+DF S+++  +NL             D+I          N  
Sbjct: 1   MASFDEASALELIREHLLTDFASMDSLITNLDDLCSTSSSCITTDYIKTESTEFDPFNQS 60

Query: 61  LTPQ---------------IPAAPSKIGHRRPSL--NVMIPPKTHSVQSPAAATATVTTS 120
             PQ                P +PS +  R+PS+  N+ IPP      +P      V   
Sbjct: 61  EHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIPPPATLNMTPQVVQPVV--- 120

Query: 121 SEVKSDVGLSQ--HYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAAF 180
             +K+DV   Q  HYRGVRRRPWGK+AAEIRDPNK+GARVWLGT+DTAIEAAKAYD AAF
Sbjct: 121 --IKADVSSEQERHYRGVRRRPWGKYAAEIRDPNKKGARVWLGTFDTAIEAAKAYDSAAF 180

Query: 181 KMRGSKAILNFPLEAGK-EAEEPPSTAAVGRKRRRESEV-GEME-------NKVVKKEES 240
           ++RGSKAILNFPLEAGK  +++P        K+R+  E+   ME       NKV K+E S
Sbjct: 181 RLRGSKAILNFPLEAGKSNSQQPEQFLETSSKKRKIEEIESSMESTGSVITNKVAKRESS 240

[Close]
BLAST of CmoCh02G009910 vs. TAIR10
Match: AT5G51190.1 (AT5G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 111/239 (46.44%), Postives = 145/239 (60.67%), Query Frame = 1 

Query: 6   DASTLDFIRQHLLSDFNSIEAFASNLDFINNNGLTPQIPAAPSKIGHRRPSLNVMIPPKT 65
           D S LD I QHLL+DF S++ FAS +     + L+ + P                     
Sbjct: 12  DQSALDLITQHLLTDFPSLDTFASTIHHCTTSTLSQRKP--------------------- 71

Query: 66  HSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYD 125
                P A  A  TT+  V+ +    +HYRGVRRRPWGK+AAEIRDPNK+G RVWLGT+D
Sbjct: 72  -----PLATIAVPTTAPVVQEND--QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFD 131

Query: 126 TAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVV 185
           TA+EAA+ YD+AAFK+RGSKAILNFPLEAGK  +   +   +  K +R+ +V E E++++
Sbjct: 132 TAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTEDESQLI 191

Query: 186 KKEESSETNEIGVPAAICPLTPSCWAPVWDN-DGK--GIFSVPPLSPHPLMGYPQCTVT 242
            + ++ +  E  V A  CPLTPS W   WD  D K  GIFSVP LSP P +G+ Q  VT
Sbjct: 192 SR-KAVKREEAQVQADACPLTPSSWKGFWDGADSKDMGIFSVPLLSPCPSLGHSQLVVT 221

[Close]
BLAST of CmoCh02G009910 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 174.5 bits (441), Expect = 8.0e-44
Identity = 112/246 (45.53%), Postives = 146/246 (59.35%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEA-----FASNL-DFINNNG---LTPQIPAAPSKIG 60
           MA   +A  +DFI QHLL+DF S+E      F + L +F +  G   +T Q P   S + 
Sbjct: 1   MATKQEALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLN 60

Query: 61  HRRPSLNVMIPPKTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRD 120
            R+P L  +            + + TV+T +E + +    +HYRGVRRRPWGK+AAEIRD
Sbjct: 61  QRKPPLPNL------------SVSRTVSTKTEKEEE---ERHYRGVRRRPWGKYAAEIRD 120

Query: 121 PNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVG--- 180
           PNK+G R+WLGTYDTA+EA +AYD+AAF++RG KAILNFPL+    +E       +G   
Sbjct: 121 PNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGK 180

Query: 181 RKRRRESEVGEMENKVVKKEE----SSETNEIGVPAAICPLTPSCWAPVWD-NDGKGIFS 230
           RKR + S   E +   VK EE    +SET E  V   + PLTPS W   WD   G GIFS
Sbjct: 181 RKRDKGSPPEEEKAARVKVEEEESNTSETTEAEVEPVV-PLTPSSWMGFWDVGAGDGIFS 230

[Close]
BLAST of CmoCh02G009910 vs. TAIR10
Match: AT5G47230.1 (AT5G47230.1 ethylene responsive element binding factor 5)

HSP 1 Score: 158.3 bits (399), Expect = 5.9e-39
Identity = 103/225 (45.78%), Postives = 133/225 (59.11%), Query Frame = 1 

Query: 20  DFNSIEAFASNLDFINNNGLTPQI-PAAPSKIGHRRPSLNVMIPPKTHSVQSPAAATATV 79
           +F+S E   S+ DF  +N    Q  P   S+I  R+P L + +P KT  +Q  A  T   
Sbjct: 87  EFDS-EVSVSDFDFKPSNQNQNQFEPELKSQI--RKPPLKISLPAKTEWIQFAAENTKPE 146

Query: 80  TTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAA 139
            T    + +    +HYRGVR+RPWGKFAAEIRDPNKRG+RVWLGT+DTAIEAA+AYD AA
Sbjct: 147 VTKPVSEEE---KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAA 206

Query: 140 FKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVVKKEESSETNEIGV 199
           F++RGSKAILNFPLE GK   +P +     +++R + E   +  KV+K E+S + N    
Sbjct: 207 FRLRGSKAILNFPLEVGK--WKPRADEGEKKRKRDDDEKVTVVEKVLKTEQSVDVN---- 266

Query: 200 PAAICPLTPSCWAPVWDNDGKGIFSVP---PLSPHPLMGYPQCTV 241
                P   S    + D D  G  + P   PLSPHP  GY Q TV
Sbjct: 267 GGETFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTV 299

[Close]
BLAST of CmoCh02G009910 vs. TAIR10
Match: AT4G17490.1 (AT4G17490.1 ethylene responsive element binding factor 6)

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-33
Identity = 91/203 (44.83%), Postives = 115/203 (56.65%), Query Frame = 1 

Query: 52  HRRPSLNVMIPPKTHSVQ----SPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAA 111
           +R+P L +  P +T  +Q    +P         ++E K      +HYRGVR RPWGKFAA
Sbjct: 97  NRKPPLKIAPPNRTKWIQFATGNPKPELPVPVVAAEEK------RHYRGVRMRPWGKFAA 156

Query: 112 EIRDPNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAV 171
           EIRDP +RG RVWLGT++TAIEAA+AYD+ AF++RGSKAILNFPLE  K          +
Sbjct: 157 EIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAEDGRGL 216

Query: 172 GRKRRRESEVGEME--NKVVKKEES-----SETNEIGVPAAICPLTPSCWAPVWDNDGKG 231
             KR+R+ E  E+    KV+K EES      E  E G+ A            + D D   
Sbjct: 217 YNKRKRDGEEEEVTVVEKVLKTEESYDVSGGENVESGLTA------------IDDWDLTE 276

Query: 232 IFSVP---PLSPHPLMGYPQCTV 241
             S+P   PLSPHP  GYPQ TV
Sbjct: 277 FLSMPLLSPLSPHPPFGYPQLTV 281

[Close]
BLAST of CmoCh02G009910 vs. TAIR10
Match: AT5G07580.1 (AT5G07580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 84/211 (39.81%), Postives = 119/211 (56.40%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEAFASNLDFINN--NGLTPQIPAAPSKIGHRRPSLN 60
           MA  +++S L+ I+ HLL D    + F  + DF  +  +GL    P  P +     P   
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQ----EPDSP 127

Query: 61  VMIPP-----------KTHSVQSPA--AATATVTTSSEVKSDVGLSQ-----HYRGVRRR 120
           V+ P            ++ S  SP   ++++T  T   VK      +     HYRGVRRR
Sbjct: 128 VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRR 187

Query: 121 PWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEE 180
           PWGKFAAEIRDP K+G+R+WLGT+++ ++AA+AYD AAFK+RG KA+LNFPL+AGK   E
Sbjct: 188 PWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK--YE 247

Query: 181 PPSTAAVGRKRRRESEVGEMENKVVKKEESS 192
            P+ +  GRKR+R     E++        SS
Sbjct: 248 APANS--GRKRKRSDVHEELQRTQSNSSSSS 270

[Close]
BLAST of CmoCh02G009910 vs. NCBI nr
Match: gi|659073275|ref|XP_008436974.1| (PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 9.4e-95
Identity = 184/240 (76.67%), Postives = 207/240 (86.25%), Query Frame = 1 

Query: 5   DDASTLDFIRQHLLSDFNSIEAFASNLDFIN-NNGLTPQIPAA-PSKIGHRRPSLNVMIP 64
           DDASTLD IRQHLL+DFNSIEAFASNL+F + NNG   QI ++ PSK+  RRPSLNV IP
Sbjct: 2   DDASTLDLIRQHLLNDFNSIEAFASNLNFDHHNNGHQSQISSSTPSKVAPRRPSLNVAIP 61

Query: 65  PKTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLG 124
           PK++SV S       V TS E KSDVG+S+HYRGVRRRPWGK+AAEIRDP+KRGARVWLG
Sbjct: 62  PKSYSVGS------AVETSIEAKSDVGVSRHYRGVRRRPWGKYAAEIRDPSKRGARVWLG 121

Query: 125 TYDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRR--ESEVGEM 184
           TYDTAIEAAKAYDRAAF+MRGSKAILNFPLEAGK+ E+PPST+ VGRKRRR  ESEV EM
Sbjct: 122 TYDTAIEAAKAYDRAAFRMRGSKAILNFPLEAGKDVEDPPSTSDVGRKRRRESESEVVEM 181

Query: 185 ENKVVKKEESSETNEIGVPAAICPLTPSCWAPVWDNDGKGIFSVPPLSPHPLMGYPQCTV 241
             K +KKEESSET EIGVP+ +CPLTPSCWA VWD+DGKGIF+VPPLSP+PLMG+PQCTV
Sbjct: 182 GKKEMKKEESSETGEIGVPSTVCPLTPSCWATVWDSDGKGIFNVPPLSPYPLMGHPQCTV 235

[Close]
BLAST of CmoCh02G009910 vs. NCBI nr
Match: gi|778700301|ref|XP_004143677.2| (PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 7.9e-94
Identity = 182/239 (76.15%), Postives = 202/239 (84.52%), Query Frame = 1 

Query: 5   DDASTLDFIRQHLLSDFNSIEAFASNLDFINNNGLTPQIPA-APSKIGHRRPSLNVMIPP 64
           DDASTLD IRQHLL+DFNSIEAFASNL+F +N+G+  QI +  PSK+  RRPSLNV IPP
Sbjct: 2   DDASTLDLIRQHLLNDFNSIEAFASNLNFDHNSGVNSQISSPTPSKVAPRRPSLNVAIPP 61

Query: 65  KTHSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGT 124
           K+ SV S       V TS E KSDVG+S+HYRGVRRRPWGKFAAEIRDP KRGARVWLGT
Sbjct: 62  KSISVGS------AVETSIEAKSDVGVSRHYRGVRRRPWGKFAAEIRDPAKRGARVWLGT 121

Query: 125 YDTAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRR--ESEVGEME 184
           YDTAIEAAKAYDRAAF+MRGSKAILNFPLEAGK+ E+P ST+ VGRKRRR  ESEV EM 
Sbjct: 122 YDTAIEAAKAYDRAAFRMRGSKAILNFPLEAGKDVEDPQSTSDVGRKRRRESESEVVEMG 181

Query: 185 NKVVKKEESSETNEIGVPAAICPLTPSCWAPVWDNDGKGIFSVPPLSPHPLMGYPQCTV 241
            K +KKEE SET EIGVP  +CPLTPSCWA VWD+DGKGIF+VPPLSP+PLMG+PQCTV
Sbjct: 182 KKEMKKEERSETEEIGVPTTVCPLTPSCWASVWDSDGKGIFNVPPLSPYPLMGHPQCTV 234

[Close]
BLAST of CmoCh02G009910 vs. NCBI nr
Match: gi|300079018|gb|ADJ67440.1| (ethylene response factor 11 [Actinidia deliciosa])

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-55
Identity = 136/275 (49.45%), Postives = 159/275 (57.82%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEAFASNLD-------FINNNGLT------------- 60
           MA  D+ S L+ IRQHLL DF   E+F +N D       F+N    T             
Sbjct: 1   MALPDETSALELIRQHLLDDFAFAESFITNFDPSSSSNSFVNQFSQTSSSESTGSCKIEL 60

Query: 61  --------PQIPAA---PSKIGHRRPSLNVMIPPKTHSVQSPAAATATVTTSSEVKSDVG 120
                   PQI      PSK   RRPSLN+ +P     +Q            +  ++D G
Sbjct: 61  DSFEFETRPQINITSPKPSKFSERRPSLNISVPAAKLKIQGADFCGGVPPREAAEEADSG 120

Query: 121 LSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIEAAKAYDRAAFKMRGSKAILN 180
             +HYRGVRRRPWGKFAAEIR+PN+RGARVWLGT+DTA+EAAKAYDRAAFK+RGSKAILN
Sbjct: 121 ERRHYRGVRRRPWGKFAAEIRNPNRRGARVWLGTFDTAVEAAKAYDRAAFKLRGSKAILN 180

Query: 181 FPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVVKKEESSETNEIGVPAAICPLTPSC 240
           FP E G   E  P  A   RKRRRE E  E E + VK+E++ E  E     A+ PLTPS 
Sbjct: 181 FPHEIGSSPESFP-PADTRRKRRREDESEEREKREVKREKAEEEEEAEGVTAVAPLTPSN 240

[Close]
BLAST of CmoCh02G009910 vs. NCBI nr
Match: gi|297745009|emb|CBI38601.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 217.6 bits (553), Expect = 2.3e-53
Identity = 131/246 (53.25%), Postives = 160/246 (65.04%), Query Frame = 1 

Query: 6   DASTLDFIRQHLLSDFNSIEAFASNLDFINNNGLTPQIPAAPSKIGHRRPSLNVMIPPKT 65
           +AS L FI QHLLSDF S+E F  N +       +P++    SK+ HRRPSL + +PP  
Sbjct: 4   EASALHFIHQHLLSDFESLETFVVNFET-----KSPKL----SKLSHRRPSLCISVPPPP 63

Query: 66  HSVQSPAAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYD 125
              Q PA            +SD G ++HYRGVRRRPWGKFAAEIRDPN+RG+RVWLGT++
Sbjct: 64  IP-QLPA------------ESDPGDARHYRGVRRRPWGKFAAEIRDPNRRGSRVWLGTFE 123

Query: 126 TAIEAAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGE---MEN 185
           TAIEAA+AYDRAAFKMRGSKAILNFPLEAG  +   P T   GRKR+RE E GE    E 
Sbjct: 124 TAIEAARAYDRAAFKMRGSKAILNFPLEAGNLSCSDP-TVISGRKRQRECESGEREQAET 183

Query: 186 KVVKKEESSETNEIGVPAA----ICPLTPSCWAPVWDNDG-KGIFSVP---PLSPHPLMG 241
           KV+K+EE    ++  + AA    I PL PS W  +W+     GIF++P   PLSPHP +G
Sbjct: 184 KVLKQEEQLPDSDCNLAAASVFGISPLMPSSWRTIWEGKATDGIFNLPPLTPLSPHPWIG 226

[Close]
BLAST of CmoCh02G009910 vs. NCBI nr
Match: gi|1009121858|ref|XP_015877689.1| (PREDICTED: ethylene-responsive transcription factor ERF105-like [Ziziphus jujuba])

HSP 1 Score: 216.5 bits (550), Expect = 5.2e-53
Identity = 141/321 (43.93%), Postives = 172/321 (53.58%), Query Frame = 1 

Query: 1   MAYGDDASTLDFIRQHLLSDFNSIEAFASNL-----------------DFINNNGLT--- 60
           MA   +AS L+ IRQHLL+DF S+++F + L                    NNN +    
Sbjct: 1   MASQQEASALELIRQHLLNDFASMDSFIATLNHCTNQIPQQSQPQYTHTKNNNNNINDLK 60

Query: 61  ------------------PQI--------PAAPSKIGHRRPSLNVMIPPKTHSVQSP--- 120
                             PQI        P  PS++ +RRPS+NV IPP T  + SP   
Sbjct: 61  ISDFLLPNEESQLEIEVKPQITTATNSAKPPNPSRLSNRRPSINVAIPPATFRLSSPPPQ 120

Query: 121 --AAATATVTTSSEVKSDVGLSQHYRGVRRRPWGKFAAEIRDPNKRGARVWLGTYDTAIE 180
             A +T + TT          S+HYRGVRRRPWGK+AAEIRDPN+RG+RVWLGT+DTAIE
Sbjct: 121 SMAVSTNSNTTVQSTSDSSNESKHYRGVRRRPWGKYAAEIRDPNRRGSRVWLGTFDTAIE 180

Query: 181 AAKAYDRAAFKMRGSKAILNFPLEAGKEAEEPPSTAAVGRKRRRESEVGEMENKVVK--- 240
           AAKAYDRAAF++RGSKAILNFPLE    AE     A++GRKRRRE E    E + VK   
Sbjct: 181 AAKAYDRAAFRLRGSKAILNFPLEVANSAE---PLASIGRKRRREDENANEEMREVKEIK 240

The following BLAST results are available for this feature:
BLAST of CmoCh02G009910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF105_ARATH1.9e-4746.44Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF10... [more]
ERF5_TOBAC8.9e-4543.33Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=... [more]
EF104_ARATH1.4e-4245.53Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF10... [more]
ERF5_NICSY1.2e-4142.25Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 ... [more]
EF102_ARATH1.1e-3745.78Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 ... [more]
BLAST of CmoCh02G009910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKV1_CUCSA5.5e-9476.15Uncharacterized protein OS=Cucumis sativus GN=Csa_5G167120 PE=4 SV=1[more]
D8VD38_ACTDE7.8e-5649.45Ethylene response factor 11 OS=Actinidia deliciosa GN=ERF11 PE=2 SV=1[more]
F6I2P6_VITVI9.9e-5150.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g01110 PE=4 SV=... [more]
F6I2P2_VITVI2.2e-5048.03Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g01000 PE=4 SV=... [more]
B9NBQ9_POPTR1.1e-4945.39Ethylene-responsive element-binding family protein OS=Populus trichocarpa GN=POP... [more]
BLAST of CmoCh02G009910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51190.11.1e-4846.44 Integrase-type DNA-binding superfamily protein[more]
AT5G61600.18.0e-4445.53 ethylene response factor 104[more]
AT5G47230.15.9e-3945.78 ethylene responsive element binding factor 5[more]
AT4G17490.14.9e-3344.83 ethylene responsive element binding factor 6[more]
AT5G07580.13.6e-2839.81 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh02G009910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073275|ref|XP_008436974.1|9.4e-9576.67PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis melo][more]
gi|778700301|ref|XP_004143677.2|7.9e-9476.15PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis sativus][more]
gi|300079018|gb|ADJ67440.1|1.1e-5549.45ethylene response factor 11 [Actinidia deliciosa][more]
gi|297745009|emb|CBI38601.3|2.3e-5353.25unnamed protein product [Vitis vinifera][more]
gi|1009121858|ref|XP_015877689.1|5.2e-5343.93PREDICTED: ethylene-responsive transcription factor ERF105-like [Ziziphus jujuba... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0050896 response to stimulus
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G009910.1CmoCh02G009910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 133..153
score: 1.3E-13coord: 94..105
score: 1.3
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 93..152
score: 3.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 93..143
score: 1.8
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 93..157
score: 5.6
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 93..151
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 93..152
score: 7.85
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 53..240
score: 1.2
NoneNo IPR availablePANTHERPTHR31677:SF8SUBFAMILY NOT NAMEDcoord: 53..240
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G009910Cucsa.129320Cucumber (Gy14) v1cgycmoB0345
CmoCh02G009910CmaCh15G013610Cucurbita maxima (Rimu)cmacmoB295
CmoCh02G009910CmaCh02G009830Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G009910Cla003618Watermelon (97103) v1cmowmB569
CmoCh02G009910Csa5G167110Cucumber (Chinese Long) v2cmocuB599
CmoCh02G009910MELO3C005465Melon (DHL92) v3.5.1cmomeB520
CmoCh02G009910ClCG01G004700Watermelon (Charleston Gray)cmowcgB517
CmoCh02G009910CSPI05G07450Wild cucumber (PI 183967)cmocpiB607
CmoCh02G009910Lsi09G004890Bottle gourd (USVL1VR-Ls)cmolsiB517
CmoCh02G009910Lsi07G001170Bottle gourd (USVL1VR-Ls)cmolsiB573
CmoCh02G009910Cp4.1LG13g00750Cucurbita pepo (Zucchini)cmocpeB552
CmoCh02G009910MELO3C005502.2Melon (DHL92) v3.6.1cmomedB595
CmoCh02G009910CsaV3_5G004890Cucumber (Chinese Long) v3cmocucB0719
CmoCh02G009910Cla97C01G004920Watermelon (97103) v2cmowmbB576
CmoCh02G009910Cla97C07G144040Watermelon (97103) v2cmowmbB630
CmoCh02G009910BhiUN395G15Wax gourdcmowgoB0735
CmoCh02G009910Bhi01G002005Wax gourdcmowgoB0723
CmoCh02G009910Carg20815Silver-seed gourdcarcmoB1389
CmoCh02G009910Carg08494Silver-seed gourdcarcmoB0971
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh02G009910CmoCh15G014220Cucurbita moschata (Rifu)cmocmoB247
CmoCh02G009910CmoCh16G002360Cucurbita moschata (Rifu)cmocmoB280
CmoCh02G009910CmoCh04G003790Cucurbita moschata (Rifu)cmocmoB435
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G009910Melon (DHL92) v3.6.1cmomedB597
CmoCh02G009910Cucumber (Chinese Long) v3cmocucB0714
CmoCh02G009910Wax gourdcmowgoB0711
CmoCh02G009910Cucumber (Gy14) v1cgycmoB0195
CmoCh02G009910Wild cucumber (PI 183967)cmocpiB604
CmoCh02G009910Melon (DHL92) v3.5.1cmomeB573
CmoCh02G009910Watermelon (Charleston Gray)cmowcgB565
CmoCh02G009910Watermelon (97103) v1cmowmB557
CmoCh02G009910Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G009910Cucumber (Gy14) v2cgybcmoB497
CmoCh02G009910Cucumber (Gy14) v2cgybcmoB614