Cla021829 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021829
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	50S ribosomal protein l3 (AHRD V1 ***- E5GC40_CUCME); contains Interpro domain(s) IPR019927 Ribosomal protein L3, bacterial/organelle-type
Location	Chr5 : 6665835 .. 6670143 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGGTACTGTTCAAATCTCTTCTTCTCATTTTTATTCCGTTAGTGGAGTATTTATTATTATTTTTAGTTGTCGTTGCTACTTAGATGAAATTAGGAGCATGACTGAAAACTAGAAAACCGACATTTCTTGCCTTGGCATTGTTAGTTTCTATCTCGCAGCCGTAGAACCAAAGAAAGCAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAATGAAATGGGATTTTGGCTTAATGATGTTGAGGAGTCTATTTTTGGCCTAATGATATTCTTTTGGACTGGGGTCCTTGTCTGTAGTTAGTGTCGAACTCTCTGTTTTTGTTGGACCTTTTTTTTTTTTTTTGAGCTCTTGTATATTCTTTCACTTGTCTCAATGTAGGTGTGGTTCCTTACTGATATATATTCTCTTACGTGAGAGGGATTTGAAGCTGTTGTTTTGGCTTCCCACACTTTCAATTCCATGGGTTTTGTTATTATACTGAACAGAACTGTTGCACATTGTTGTTTTGGACCAGAATTTCACCAGCTCCTATCATCTCATCACTTCCATCCATACACTTAGCTAGACATAACCATTTGTGGCTTTTTAAATTACAATAACTGTGGTATTGAGGTTGATGGTTGTACTCCTTGCATCATGTTCATGGCCAATCCCACTAATCTTCGGAAGATTTTCACCCACCCAATACTAACTTTGAAAGACAACTAGAGTTTTAGATATTGGTAAAATTTATACCTGGTGTTGATTTCACTCTTTCTAAAGAAAATACCAATTGTCTCCTCCATTAAACCATATGTTTAGGGTTCTTTTTTCTTTTTCAGTTCTTACATATTTTATTTCCTACAACTTGAATTTATTGACCAAAGGTGCTATGGTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGTGAATCCATTGAACCATTTTTTTTTTTGATAAGAAACAATTTCATTGATGAATGAAATATCCAAAGATTCATTCAATTCCTTATATTTGGCATTATGGTTAAGTCAGTTATGTATCAAAATTACTCAAACAGTAAAATGTTATCGTGGGAACATTGACTCATATAAATGTGTCTCTCTCTGAGTTTAGGTCAAAGTACCAATTAAAAGCTGTTTAATCATCAATGACAACTGAATGAACAGATCTATGAAATTGAACTGCAATAAGTGATAACTGTAAACTGGGCGCGTTTAAAAAACATTGTTGGTTCCTTTTCTCTTTCTTCCTTGGCATTGACATTTCTAGTCAATTATGTTCATCAACAGTATTCTGTATGTACTGATATTTCTTCCAGGGATTCTCAAATATGCTATTTTTAATCGTGGTAGCACTGCATAATGTGATATCAAGGACATGGACTATTGGCCTTTGCATCAACTTCAAGCAATACTGATGATGTCAGCCTTGTTATGTTTAACTACCCACAACTTTCTTTGATGTGCAACTTACAACTCAAACTTTAACTTATAGAGCAAGTCCAATCCAATTAAAGTATCAAGTTACATCAAATGAACATATAGGTGTAAGCGATCATATCTTTTAAAACAAAAACCACCCAAATAACAAAGAATGCGAAAACCACAATAGTAGAGATCTGTAGTTCAAAACTCAAGTGAACAACCTCATGGTATCCTACTAATAACTAAACTCCAAAATCTAAAATGTCCATTGAAGAGTCAAAATGAGAGTTTTAGCAGAAACAATTATTGGACAAGTTATGTATCTTGTTTGTCATTGTCAGATTCCAATTTGTATCATTGCAATCCTTACTTTGGGTTATGGGCATTATAATAGATTTAGTAAGCAGTAAGCAAATATTTACATGATTCTCAAACATAAGCATGCTTAATTACCTGACTTGCTGCATGGTCTGCAAGATACAATTTAACCATCAAAGTTACACCGAGATATACGTGTTTATCATAAGATAACACGAACAATTTCTCGATTAGATTATGTGCATCCTGGAGACAAAAATAATAAAAAAAACACAATTCATATATATAAGCATACAGAAAAAAAAATATATAAGGGAGCTAACCCCTTTGAAAGCTGTGATCTTTGCTTTGTCTTCTTTCATGTTTGTGCTAATTTGGCTAATATCAAGTTGTATATTTGTGTCCTGAAAATTTTTCATGAGATCTTGAATAATCATAACAAAATTGTTTCCTTACCTTGTGTAAATGGTATAAAATATTTTCCATGAAAACAATGTCTCTCATTGCTAATCCTTTTTCTAATTGTGCTCAGGGAGTGATGAAAAGGCATGGTTTTTCAGGAATGCNNNNNNNNNNNNNNNNNGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTGCGTTTATCTTTCCTTGGTGGTATTCATTTTTATGATTGAGTGGTATCTTGGTTCTTCATTGTACTTTAGAGCTGCCTGAAACTCACAATTGAGATAGTAGAGAAGTTGTAGTAGTATATACCGGTAGCCTACTAGGTCGCTTCTGATTCTCAGAGTATTGCAAGGCTCCTGAATGAATGGTAATTTCATAGAAGAGAAATAAGAATTGACTGGGAGCATATAGTTACAAAACAAGTATGAATAACTTGCATGGTGAAAGTTTATTCACATAATTCCACCCTGGACAGTTTACGGATGTCACTCTGCTTGTGGAATGAATTAGTATCGAGTAACATGTGGAAATTTTCATTGGTTACAATCTTGAAAATAATATTCTTTCTGTTGGTCTATTCCTGGTGAAGCTTTAATATTTACGAAGTTTGAATAGCCTTATACTCTTGAACCCTCTTTCAAATACTGACCTGTTATTCTACAGTTCCGTGATTCAATAGAATATACTTGGAGTTCTGTCAGATTTGCTTTGCATAGGGAACCGTGGAAACTTTTATATCGAATCTTAGAAGCTTGTCCCTGTTTCTAAATAACAGAAAAAAGAAAATCCAAAGTGTGGAATAATTTTTTATGATCTGTTAATAGTGAGTTCTAGTCCGTTTTCATTGTATTCCATGTAATTTATGATAGTGAGAAACATGCGGTTATTTTGCAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTAAGTTTCTTCTAAAACCAAATTTCAAACTCTTGATCTGATCCTTATACTTGAGTCCTTGTTATATACATCAATATCATATACTCTTGGGACATCATGGTCTGAGGCTTTTGCTGCCCATAACTCCACCTTTTCTTTAGGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGA

mRNA sequence

ATGTCAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGAATGCNNNNNNNNNNNNNNNNNGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGA

Coding sequence (CDS)

ATGTCAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGAATGCNNNNNNNNNNNNNNNNNGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGA

Protein sequence

MSALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAADNEDTEKLEPLVADLGEVDPFMVGD

Homology

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BLAST of Cla021829 vs. Swiss-Prot
Match: RK3B_ARATH (50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis thaliana GN=RPL3B PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 231/328 (70.43%), Postives = 263/328 (80.18%), Query Frame = 1


Query: 1   MSALSRGLISRL-RLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSL-- 60
           M+A+ RGL+SR+ + LSI S T     SSS S  + S ++  R FS+   +    GS   
Sbjct: 1   MAAVPRGLLSRINQFLSIRSITP----SSSESLPHCSSFFLIRRFSSDTGLMDGGGSDII 60

Query: 61  -SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIE 120
            + + IIEAK G M+  SKRTG+IAVKCGM+ALWDKWG RIP+++LWVDDNIVSQVKT+E
Sbjct: 61  GAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVE 120

Query: 121 KEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHF 180
           KEGI ALQIGCGQKK KHL+K  +GHFRAQGVPLKRKL+EFPV+EDALLPVGT++GVRHF
Sbjct: 121 KEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHF 180

Query: 181 VPGQYVDVTGITTGKGFQEC---XXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240
           VPGQYVDVTGIT GKGFQ C         PASHGASLSHRSGGSTGQRDAPGKVFKGRKM
Sbjct: 181 VPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240

Query: 241 AGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTY 300
           AGRMG  QRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFIKDA  KK + S LPFPTY
Sbjct: 241 AGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTY 300

Query: 301 FAADNEDTEKLEPLVADLGEVDPFMVGD 322
            A ++ED  +LEPLVADLGEVDPFM+ +
Sbjct: 301 LAPEDEDPSELEPLVADLGEVDPFMLAE 324

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BLAST of Cla021829 vs. Swiss-Prot
Match: RL3_ZYMMO (50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=rplC PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 115/238 (48.32%), Postives = 151/238 (63.45%), Query Frame = 1


Query: 76  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           RTGVIA K GM+ L+ + G  +PVTVL ++D  V  VK  +++G  A+Q+G G  KAK++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKNV 61

Query: 136 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGF-- 195
           TKP  GHF    V LK KL EFPVSEDA+L VGT+I   HF+ GQ VD++G T GKGF  
Sbjct: 62  TKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDISGQTQGKGFAG 121

Query: 196 -QECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
             +        A+HG SLSHRS GSTG R  PG+VFK +KMAG MG +QRT +N+ +   
Sbjct: 122 AMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVIST 181

Query: 256 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAADNEDTEKLEPLVAD 311
           D  R+LI+VRG VPG++G ++ I+DAV K    +  P+P    A N +     P+ A+
Sbjct: 182 DAERDLIFVRGSVPGSKGAWLIIRDAV-KVARPTDAPYPAAIKAANGNEAPAAPVAAE 238

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BLAST of Cla021829 vs. Swiss-Prot
Match: RL3_NOVAD (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain DSM 12444 / F199) GN=rplC PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.0e-51
Identity = 108/231 (46.75%), Postives = 151/231 (65.37%), Query Frame = 1


Query: 76  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           RTGVIA K GM+ L+ + G  +PVTVL +++  V  V+T E++G  ALQ+G G+ K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 136 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQ- 195
            KP+  HF    VPLK ++ EF V++DALL VG+ I   HFVPGQYVD+TG T GKGFQ 
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 196 --ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
             +        A+HG S+SHR+ GSTG R  PG+VFK +KMAG MG +QRT +N+ + + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 256 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYF--AADNEDT 302
           D  R LI+V+G VPG++  ++ ++DAV K    +  P+P     AA++ D+
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDAV-KVSRHAEAPYPAGLKQAANSNDS 231

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BLAST of Cla021829 vs. Swiss-Prot
Match: RL3_MAGSA (50S ribosomal protein L3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplC PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.5e-50
Identity = 107/219 (48.86%), Postives = 141/219 (64.38%), Query Frame = 1


Query: 76  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           R+G+IA K GM+ ++ + G  +PVTVL VD   V   +++EK+G  A+Q+G G  K K++
Sbjct: 2   RSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKNV 61

Query: 136 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGF-- 195
           +KP   +F    V  K+KL EF V+ + LL VGT +   HF+PGQYVDVTG T GKGF  
Sbjct: 62  SKPARANFAKAKVEPKKKLVEFRVAPENLLEVGTELSAAHFIPGQYVDVTGTTIGKGFAG 121

Query: 196 -QECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
             +        A+HG S+SHRS GSTGQR  PGKVFKG+KMAG MG +Q T +N+ +   
Sbjct: 122 GMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVVST 181

Query: 256 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFP 292
           D  R LI V+G VPG EG++V ++DAV +KL   V PFP
Sbjct: 182 DADRGLILVKGSVPGHEGSWVLVRDAVKRKLPDGV-PFP 219

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BLAST of Cla021829 vs. Swiss-Prot
Match: RL3_METNO (50S ribosomal protein L3 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplC PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 110/222 (49.55%), Postives = 139/222 (62.61%), Query Frame = 1


Query: 76  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 135
           R+GVIA K GM+ ++   G  +PVTVL VD   V   +T+EK G  ALQ+G G+ K K++
Sbjct: 2   RSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKNV 61

Query: 136 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGF-- 195
           +K E G F    V  KRKL EF VSEDAL+PVG  I   HF+PGQ+VDVTGITTGKGF  
Sbjct: 62  SKAERGRFAIAKVEPKRKLAEFRVSEDALIPVGAEITADHFIPGQFVDVTGITTGKGFAG 121

Query: 196 -QECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 255
             +        ASHG S+SHRS GSTG R  PGK FK +KM G +G ++ T +N+ + + 
Sbjct: 122 GMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVVRT 181

Query: 256 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYF 295
           DP R LI V G VPG  G ++ ++DAV +KL  +  P P  F
Sbjct: 182 DPERGLILVEGAVPGVAGGWIHVRDAVKRKL-PAEAPMPGKF 222

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BLAST of Cla021829 vs. TrEMBL
Match: A0A0A0LAV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171140 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 3.0e-156
Identity = 283/328 (86.28%), Postives = 295/328 (89.94%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSH---TSISSSSSRTNASCYYFARAFSTQDLIQASDGSL 60
           MSALSRGLISR RLLSINS  SH   TS SSSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
           S+SSI EAKPG M  NS RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGI+ GKGFQ   +       PASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PG EGNFVFIKDAVYKKLNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FAADNEDTEKLEPLVADLGEVDPFMVGD 322
           FA D EDT+KLEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of Cla021829 vs. TrEMBL
Match: E5GC40_CUCME (50S ribosomal protein l3 OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 5.2e-156
Identity = 281/328 (85.67%), Postives = 298/328 (90.85%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 60
           MSALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGI+ GKGFQ   +       PASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FAADNEDTEKLEPLVADLGEVDPFMVGD 322
           FA D EDT+KLEPLVADLGEVDPFM+GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of Cla021829 vs. TrEMBL
Match: M5XEE9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008555mg PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 9.5e-134
Identity = 241/327 (73.70%), Postives = 280/327 (85.63%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSISSSSSRTNA---SCYYFARAFSTQDLIQASDGSL 60
           MSALSRGL+SRLRLLS+N  T+ ++ +++++ T +   + Y+F R F+++ L+ AS+ + 
Sbjct: 1   MSALSRGLLSRLRLLSLNPTTTSSAAAANANATTSFTQTQYHFFRWFNSEALVDASEVAE 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
             S +IEAKPG M+P+SKRTG+IAVKCGM+A WDKWGAR+P+TVLWVDDNIVSQVKT EK
Sbjct: 61  ERSRVIEAKPGAMSPSSKRTGLIAVKCGMTARWDKWGARVPITVLWVDDNIVSQVKTPEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EG  ALQIGCGQKKAKHLTK E+GHFRAQGVPLKRKL+EFPV++DALLPVG +IGVRHFV
Sbjct: 121 EGFPALQIGCGQKKAKHLTKSEVGHFRAQGVPLKRKLREFPVTKDALLPVGMSIGVRHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGIT GKGFQ   +       PASHGASLSHRS GSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGITRGKGFQGGMKRHGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYF 300
           GRMGGKQRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFI+DA YKK + S+LPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIRDAFYKKPDISLLPFPTYF 300

Query: 301 AADNEDTEKLEPLVADLGEVDPFMVGD 322
           A ++ED  KLE LVADLGEVDPFMV D
Sbjct: 301 APEDEDATKLETLVADLGEVDPFMVAD 327

[Close]

BLAST of Cla021829 vs. TrEMBL
Match: A9PFR0_POPTR (50S ribosomal protein L3-2 OS=Populus trichocarpa GN=POPTR_0008s21180g PE=2 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 6.0e-128
Identity = 239/326 (73.31%), Postives = 263/326 (80.67%), Query Frame = 1


Query: 1   MSALSRGLISRL-RLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSS 60
           MSALSRGLISRL R+LS NS T  T+ +          +Y  R FS   LI  S      
Sbjct: 1   MSALSRGLISRLYRILSANSRTPPTATTK---------FYLLRCFSADALIDGSQVEYHQ 60

Query: 61  SS-IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKE 120
            S IIEAKPGVM PNSKRTGV+AVKCGM+ALWDKWGARIP+TVLWVDDNIVSQVKT+EKE
Sbjct: 61  QSRIIEAKPGVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKE 120

Query: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVP 180
           G  ALQ+GCGQKK KHLTKPE+GHFRAQGVP+KRKL+EFPV+EDALLPVGT +GVRHFVP
Sbjct: 121 GFFALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTYVGVRHFVP 180

Query: 181 GQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAG 240
           GQ+VDV GIT GKGFQ   +       PASHGASLSHRS GSTGQRDAPGKVFKG+KM G
Sbjct: 181 GQFVDVAGITMGKGFQGGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPG 240

Query: 241 RMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFA 300
           RMGG QRTVKNVW+YKIDPARNL+WV+GQVPG EGNFVFIKD+VYKK +  +LPFPTYF 
Sbjct: 241 RMGGVQRTVKNVWVYKIDPARNLMWVKGQVPGAEGNFVFIKDSVYKKPDIQMLPFPTYFG 300

Query: 301 ADNEDTEKLEPLVADLGEVDPFMVGD 322
           A  ED +  EPLVADLGEVDPFMV D
Sbjct: 301 A--EDDDNAEPLVADLGEVDPFMVAD 315

[Close]

BLAST of Cla021829 vs. TrEMBL
Match: D7T692_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00810 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.8e-128
Identity = 236/324 (72.84%), Postives = 258/324 (79.63%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSS 60
           MSA SRGLIS  R LSI   TS    S           Y  R F ++ LI          
Sbjct: 1   MSAASRGLISGFRFLSIGPRTSAIVAS-----------YQFRRFGSESLID------EEP 60

Query: 61  SIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGI 120
            II  KPGVM+PNSKRTG IAVKCGMSALWDKWGAR+P+TVLW+DDNIVSQVKT EKEG+
Sbjct: 61  RIIVPKPGVMSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGL 120

Query: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQ 180
            ALQ+GCGQKKAKHLTKPE+GHFRAQGVPLKRKL+EFPV+EDALLPVGT IGVRHFVPGQ
Sbjct: 121 NALQVGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQ 180

Query: 181 YVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240
           YVDVTGIT GKGFQ   +       PASHGASLSHRS GSTGQRDAPGKVFKG+KM GRM
Sbjct: 181 YVDVTGITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRM 240

Query: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAAD 300
           GGKQRTVKNVW+YKIDP RNL+WVRGQVPG EGNFVFIKDAVYKK + S+LPFPTYF A+
Sbjct: 241 GGKQRTVKNVWVYKIDPTRNLMWVRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPAE 300

Query: 301 NEDTEKLEPLVADLGEVDPFMVGD 322
           +ED   LEP+VADLG++DPFMV D
Sbjct: 301 DEDPTVLEPIVADLGDIDPFMVAD 307

[Close]

BLAST of Cla021829 vs. NCBI nr
Match: gi|449459792|ref|XP_004147630.1| (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 559.3 bits (1440), Expect = 4.4e-156
Identity = 283/328 (86.28%), Postives = 295/328 (89.94%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSH---TSISSSSSRTNASCYYFARAFSTQDLIQASDGSL 60
           MSALSRGLISR RLLSINS  SH   TS SSSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
           S+SSI EAKPG M  NS RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGI+ GKGFQ   +       PASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PG EGNFVFIKDAVYKKLNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FAADNEDTEKLEPLVADLGEVDPFMVGD 322
           FA D EDT+KLEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of Cla021829 vs. NCBI nr
Match: gi|659077038|ref|XP_008438999.1| (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo])

HSP 1 Score: 558.5 bits (1438), Expect = 7.4e-156
Identity = 281/328 (85.67%), Postives = 298/328 (90.85%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 60
           MSALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGI+ GKGFQ   +       PASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 300
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FAADNEDTEKLEPLVADLGEVDPFMVGD 322
           FA D EDT+KLEPLVADLGEVDPFM+GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of Cla021829 vs. NCBI nr
Match: gi|1009163611|ref|XP_015900059.1| (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 489.2 bits (1258), Expect = 5.5e-135
Identity = 237/325 (72.92%), Postives = 282/325 (86.77%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSISSSS-SRTNASCYYFARAFSTQDLIQASDGSLSS 60
           MSALSRGL+SR+RLLS+N   + T+ +++S S +  + Y+F+R FS++ L+ A++ +   
Sbjct: 1   MSALSRGLLSRIRLLSLNPPATCTATTTTSFSSSTPALYHFSRRFSSESLLDATEIASQP 60

Query: 61  SSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEG 120
           + IIEA+PG M PNSKRTG+IAVKCGMSALWDKWGAR+P+TVLWVDDNIVSQVKTI+K+ 
Sbjct: 61  TRIIEARPGAMTPNSKRTGLIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIDKDC 120

Query: 121 ITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPG 180
            TALQIGCG KKAKHLTKPE+GHFRAQ VPLKRKL+EFPV++DALLPVGT++GVRHFVPG
Sbjct: 121 TTALQIGCGHKKAKHLTKPEVGHFRAQDVPLKRKLREFPVTDDALLPVGTSLGVRHFVPG 180

Query: 181 QYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGR 240
           Q+VDVTGIT GKGFQ   +       PASHGASLSHRSGGSTGQRDAPGKVFKGRKM GR
Sbjct: 181 QFVDVTGITRGKGFQGVMKRHGFKGGPASHGASLSHRSGGSTGQRDAPGKVFKGRKMPGR 240

Query: 241 MGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAA 300
           MG +QRTVKNVW+YKIDPARNL+WV+GQVPG +GNFVFIKD+VYKK N S+LPFPTYFAA
Sbjct: 241 MGAQQRTVKNVWVYKIDPARNLMWVKGQVPGAKGNFVFIKDSVYKKPNISMLPFPTYFAA 300

Query: 301 DNEDTEKLEPLVADLGEVDPFMVGD 322
           ++EDT +LEP++ADLGEVDPFM  D
Sbjct: 301 EDEDTAELEPMIADLGEVDPFMAAD 325

[Close]

BLAST of Cla021829 vs. NCBI nr
Match: gi|645233773|ref|XP_008223504.1| (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Prunus mume])

HSP 1 Score: 485.3 bits (1248), Expect = 8.0e-134
Identity = 239/324 (73.77%), Postives = 277/324 (85.49%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSS 60
           MSALSRGLISRLRLLS+N   +  + +++++    + Y+F R FS++ L++A++ +   S
Sbjct: 1   MSALSRGLISRLRLLSLNPTAAAAANANATTSFTQTQYHFFRWFSSEALVEAAEVAEERS 60

Query: 61  SIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGI 120
            +IEAKPG M+P+SKRTG++AVKCGM+A WDKWGAR+P+TVLWVDDNIVSQVKT EKEG 
Sbjct: 61  RVIEAKPGAMSPSSKRTGLVAVKCGMTARWDKWGARVPITVLWVDDNIVSQVKTPEKEGF 120

Query: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQ 180
            ALQIGCGQKKAKHLTK E+GHFRAQGVPLKRKLKEFPV++DALLPVG +IGVRHFVPGQ
Sbjct: 121 PALQIGCGQKKAKHLTKSEVGHFRAQGVPLKRKLKEFPVTKDALLPVGMSIGVRHFVPGQ 180

Query: 181 YVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240
           YVDVTGIT GKGFQ   +       P SHGASLSHRS GSTGQRDAPGKVFKG+KMAGRM
Sbjct: 181 YVDVTGITRGKGFQGGMKRHGFKGMPESHGASLSHRSIGSTGQRDAPGKVFKGKKMAGRM 240

Query: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAAD 300
           GGKQRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFI+DA YKK + S+LPFPTYFA +
Sbjct: 241 GGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIRDAFYKKPDISLLPFPTYFAPE 300

Query: 301 NEDTEKLEPLVADLGEVDPFMVGD 322
           +ED  KLEPLVADLGEVDPFMV D
Sbjct: 301 DEDATKLEPLVADLGEVDPFMVAD 324

[Close]

BLAST of Cla021829 vs. NCBI nr
Match: gi|596145900|ref|XP_007222647.1| (hypothetical protein PRUPE_ppa008555mg [Prunus persica])

HSP 1 Score: 484.6 bits (1246), Expect = 1.4e-133
Identity = 241/327 (73.70%), Postives = 280/327 (85.63%), Query Frame = 1


Query: 1   MSALSRGLISRLRLLSINSGTSHTSISSSSSRTNA---SCYYFARAFSTQDLIQASDGSL 60
           MSALSRGL+SRLRLLS+N  T+ ++ +++++ T +   + Y+F R F+++ L+ AS+ + 
Sbjct: 1   MSALSRGLLSRLRLLSLNPTTTSSAAAANANATTSFTQTQYHFFRWFNSEALVDASEVAE 60

Query: 61  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 120
             S +IEAKPG M+P+SKRTG+IAVKCGM+A WDKWGAR+P+TVLWVDDNIVSQVKT EK
Sbjct: 61  ERSRVIEAKPGAMSPSSKRTGLIAVKCGMTARWDKWGARVPITVLWVDDNIVSQVKTPEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 180
           EG  ALQIGCGQKKAKHLTK E+GHFRAQGVPLKRKL+EFPV++DALLPVG +IGVRHFV
Sbjct: 121 EGFPALQIGCGQKKAKHLTKSEVGHFRAQGVPLKRKLREFPVTKDALLPVGMSIGVRHFV 180

Query: 181 PGQYVDVTGITTGKGFQ---ECXXXXXXPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTGIT GKGFQ   +       PASHGASLSHRS GSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGITRGKGFQGGMKRHGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYF 300
           GRMGGKQRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFI+DA YKK + S+LPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIRDAFYKKPDISLLPFPTYF 300

Query: 301 AADNEDTEKLEPLVADLGEVDPFMVGD 322
           A ++ED  KLE LVADLGEVDPFMV D
Sbjct: 301 APEDEDATKLETLVADLGEVDPFMVAD 327

The following BLAST results are available for this feature:

BLAST of Cla021829 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RK3B_ARATH	1.8e-125	70.43	50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis thaliana GN=RPL3B PE=2 ...	[more]
RL3_ZYMMO	2.4e-53	48.32	50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 ...	[more]
RL3_NOVAD	5.0e-51	46.75	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain DSM 12444 / ...	[more]
RL3_MAGSA	2.5e-50	48.86	50S ribosomal protein L3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700...	[more]
RL3_METNO	3.2e-50	49.55	50S ribosomal protein L3 OS=Methylobacterium nodulans (strain ORS2060 / LMG 2196...	[more]

BLAST of Cla021829 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAV0_CUCSA	3.0e-156	86.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171140 PE=3 SV=1	[more]
E5GC40_CUCME	5.2e-156	85.67	50S ribosomal protein l3 OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
M5XEE9_PRUPE	9.5e-134	73.70	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008555mg PE=3 SV=1	[more]
A9PFR0_POPTR	6.0e-128	73.31	50S ribosomal protein L3-2 OS=Populus trichocarpa GN=POPTR_0008s21180g PE=2 SV=1	[more]
D7T692_VITVI	7.8e-128	72.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00810 PE=3 SV=...	[more]

BLAST of Cla021829 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459792\|ref\|XP_004147630.1\|	4.4e-156	86.28	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis sativus]	[more]
gi\|659077038\|ref\|XP_008438999.1\|	7.4e-156	85.67	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo]	[more]
gi\|1009163611\|ref\|XP_015900059.1\|	5.5e-135	72.92	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Ziziphus jujuba]	[more]
gi\|645233773\|ref\|XP_008223504.1\|	8.0e-134	73.77	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Prunus mume]	[more]
gi\|596145900\|ref\|XP_007222647.1\|	1.4e-133	73.70	hypothetical protein PRUPE_ppa008555mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000597	Ribosomal_L3
IPR009000	Transl_B-barrel_sf
IPR019927	Ribosomal_L3_bac/org-type

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021829	Cla021829.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 174..254 score: 1.
IPR009000	Translation protein, beta-barrel domain	unknown	SSF50447	Translation proteins	coord: 71..293 score: 9.71
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 62..318 score: 4.1E
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAMs	TIGR03625	TIGR03625	coord: 78..276 score: 3.0
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 230..283 score: 1.2E-5coord: 78..120 score: 1.
None	No IPR available	GENE3D	G3DSA:4.10.960.10		coord: 151..229 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021829	Cla97C05G088510	Watermelon (97103) v2	wmwmbB206
Cla021829	Csa3G171140	Cucumber (Chinese Long) v2	cuwmB233
Cla021829	MELO3C006752	Melon (DHL92) v3.5.1	mewmB461
Cla021829	ClCG05G006870	Watermelon (Charleston Gray)	wcgwmB286
Cla021829	CSPI03G15360	Wild cucumber (PI 183967)	cpiwmB231
Cla021829	Cucsa.252160	Cucumber (Gy14) v1	cgywmB479
Cla021829	CmoCh06G015820	Cucurbita moschata (Rifu)	cmowmB793
Cla021829	Cp4.1LG08g05500	Cucurbita pepo (Zucchini)	cpewmB845
Cla021829	CsGy3G015430	Cucumber (Gy14) v2	cgybwmB217
Cla021829	MELO3C006752.2	Melon (DHL92) v3.6.1	medwmB447
Cla021829	Carg25657	Silver-seed gourd	carwmB0738
Cla021829	CsaV3_3G015540	Cucumber (Chinese Long) v3	cucwmB239
Cla021829	Bhi01G000820	Wax gourd	wgowmB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021829	Watermelon (97103) v2	wmwmbB217
Cla021829	Wax gourd	wgowmB067
Cla021829	Cucurbita maxima (Rimu)	cmawmB242
Cla021829	Cucurbita maxima (Rimu)	cmawmB798
Cla021829	Cucurbita moschata (Rifu)	cmowmB231
Cla021829	Cucurbita moschata (Rifu)	cmowmB341
Cla021829	Watermelon (Charleston Gray)	wcgwmB332
Cla021829	Cucurbita pepo (Zucchini)	cpewmB152
Cla021829	Cucurbita pepo (Zucchini)	cpewmB613
Cla021829	Bottle gourd (USVL1VR-Ls)	lsiwmB366
Cla021829	Melon (DHL92) v3.6.1	medwmB094
Cla021829	Silver-seed gourd	carwmB0070
Cla021829	Silver-seed gourd	carwmB0269