Cla019790 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019790
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nucleic acid binding protein (AHRD V1 **** D7L2W2_ARALL); contains Interpro domain(s) IPR014560 Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
Location	Chr2 : 27211650 .. 27212867 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGATTGCAGTATCGGGAGCCACAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAATACCAAGAAACCCCTCTTCTTCTACGTAAATCTTGCTAAGGTATACATAAATCCTCCTTTACCTCTTCAATTCTTCGATTGTAGTGAATGAAAAAAGATTCCCGATTTTCGTTATGTTCTTGTTTGGTTCTCAAGAAATGGAATCCAAATCCGCAATGTATGAACGATTCATCATTAATCTATGTTGTTCTTTAGATTCACATTATGATTTGAGCAATTGTATCTGCAAAATCGTTTGATTTCCGTTTCTACGTTGTTTGGTTGTTGTTTGATCGGAAATTCTAATCGCTGTTTCCCCTAATATCTTTATTGATTTAGAGGTACATTCAACAGCATAATGAAGTTGAGCTTTCTGCTTTGGGAATGGGTACTGTTTCGTTTCTTGTACATTTTTTTTCTTTTTCTTTTTTTTTTTTTTTCCCTCTGATCGATTTATATCTGACGAATTTTTGGTTTTCTTGACTCAAATCCTCCTTTGCATCATTACAGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAGAAGAGTAATCCATTTTTATTATCTTTAATGCTAATTTCTATGAATAAAAATGATGATAAAAACTACTGATAATCGTATGGTTTTGATATGAAACAGAAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAGGCTAAGGTTTGTTTATGCTTTAACACTTAATCAGCAATAGATTGAATAATGCCAAATAGTTATGAATGTTTGGATGTTATATCCTCGTGGGATTGATTGATTTTGGATGATTATCTGCTGTGTTAGATCATTTTAATTGGGTTTTTAACGAATGATTTGGTATGTTTCAAATAATGTCAAAGGCATGTTTGATTTTGAATATAACAAAACTGATTTAACCATTTCAAAATCATTTTCGAACAAGGTTTGACAACACAGAATCATAGATTGAGATTCTTAGAGTTTTATTTTTGGTCCATTTTGTGATAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGGCGGTGGTGGCCGGCGCCGCTGCTGCTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG

mRNA sequence

ATGGCGACGATTGCAGTATCGGGAGCCACAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAATACCAAGAAACCCCTCTTCTTCTACGTAAATCTTGCTAAGAGGTACATTCAACAGCATAATGAAGTTGAGCTTTCTGCTTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAGGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGGCGGTGGTGGCCGGCGCCGCTGCTGCTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG

Coding sequence (CDS)

ATGGCGACGATTGCAGTATCGGGAGCCACAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAATACCAAGAAACCCCTCTTCTTCTACGTAAATCTTGCTAAGAGGTACATTCAACAGCATAATGAAGTTGAGCTTTCTGCTTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAGGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGGCGGTGGTGGCCGGCGCCGCTGCTGCTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG

Protein sequence

MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEAVVAGAAAAEEKKAEESKEEQ

Homology

[Close]

BLAST of Cla019790 vs. Swiss-Prot
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-39
Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 1


Query: 11  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 70
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 71  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKE 122

[Close]

BLAST of Cla019790 vs. TrEMBL
Match: A0A0A0LG69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010240 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 137/141 (97.16%), Postives = 137/141 (97.16%), Query Frame = 1


Query: 2   ATIAVSGAT-ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPET 122

Query: 122 VVAGAAAA-EEKKAEESKEEQ 141
           VVA AAAA EEKKAEESKEEQ
Sbjct: 123 VVAVAAAAEEEKKAEESKEEQ 143

[Close]

BLAST of Cla019790 vs. TrEMBL
Match: A0A0S3SQ60_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G160900 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+A +     ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVT
Sbjct: 1   MATVAAAATLPDETPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFD+LM++    PE 
Sbjct: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMSSTKTEPE- 120

Query: 121 VVAGAAAAEEKK 133
               AAAAE+KK
Sbjct: 121 ----AAAAEDKK 127

[Close]

BLAST of Cla019790 vs. TrEMBL
Match: A0A0L9THG8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan845s000300 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+A +     ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVT
Sbjct: 1   MATVAAAATLPDETPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFD+LM++    PE 
Sbjct: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMSSTKTEPE- 120

Query: 121 VVAGAAAAEEKK 133
               AAAAE+KK
Sbjct: 121 ----AAAAEDKK 127

[Close]

BLAST of Cla019790 vs. TrEMBL
Match: W9RI44_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024556 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.2e-49
Identity = 109/135 (80.74%), Postives = 114/135 (84.44%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+AV  A +   QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 1   MATVAVPQAQSIHAQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           I+EILKNNGLATEKKV TSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL+ A+T  PE 
Sbjct: 61  ISEILKNNGLATEKKVSTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLVAASTVAPE- 120

Query: 121 VVAGAAAAEEKKAEE 136
                A  E  K EE
Sbjct: 121 ----PANDENSKEEE 130

[Close]

BLAST of Cla019790 vs. TrEMBL
Match: A0A067JVY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23517 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.9e-48
Identity = 106/119 (89.08%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 2   ATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 61
           AT      TA    KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 22  ATATEMVTTAQGQHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 81

Query: 62  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 121
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM AA  VPEA
Sbjct: 82  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMDAANTVPEA 140

[Close]

BLAST of Cla019790 vs. NCBI nr
Match: gi|449443233|ref|XP_004139384.1| (PREDICTED: uncharacterized protein At2g34160 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 137/141 (97.16%), Postives = 137/141 (97.16%), Query Frame = 1


Query: 2   ATIAVSGAT-ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPET 122

Query: 122 VVAGAAAA-EEKKAEESKEEQ 141
           VVA AAAA EEKKAEESKEEQ
Sbjct: 123 VVAVAAAAEEEKKAEESKEEQ 143

[Close]

BLAST of Cla019790 vs. NCBI nr
Match: gi|659070696|ref|XP_008456222.1| (PREDICTED: uncharacterized protein At2g34160 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-62
Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 1


Query: 1   MATIAVSGAT-ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 AVVAGAAAA-EEKKAEESKEEQ 141
            VVA AAA  EEKKAEE+KEEQ
Sbjct: 121 TVVAVAAAGEEEKKAEENKEEQ 142

[Close]

BLAST of Cla019790 vs. NCBI nr
Match: gi|1009117586|ref|XP_015875397.1| (PREDICTED: uncharacterized protein At2g34160 [Ziziphus jujuba])

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-49
Identity = 116/144 (80.56%), Postives = 123/144 (85.42%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+ VS + A ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 1   MATMVVS-SQAIETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           IAEILKNNGLATEKKV TSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAA      
Sbjct: 61  IAEILKNNGLATEKKVSTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAA------ 120

Query: 121 VVAGAAAAEEKK-----AEESKEE 140
            VA A A E+K+      +E+K+E
Sbjct: 121 -VASATATEDKENDKEIGKENKKE 136

[Close]

BLAST of Cla019790 vs. NCBI nr
Match: gi|920683230|gb|KOM29975.1| (hypothetical protein LR48_Vigan845s000300 [Vigna angularis])

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+A +     ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVT
Sbjct: 1   MATVAAAATLPDETPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFD+LM++    PE 
Sbjct: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMSSTKTEPE- 120

Query: 121 VVAGAAAAEEKK 133
               AAAAE+KK
Sbjct: 121 ----AAAAEDKK 127

[Close]

BLAST of Cla019790 vs. NCBI nr
Match: gi|703121217|ref|XP_010102274.1| (Uncharacterized protein L484_024556 [Morus notabilis])

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 109/135 (80.74%), Postives = 114/135 (84.44%), Query Frame = 1


Query: 1   MATIAVSGATATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MAT+AV  A +   QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 1   MATVAVPQAQSIHAQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEA 120
           I+EILKNNGLATEKKV TSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL+ A+T  PE 
Sbjct: 61  ISEILKNNGLATEKKVSTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLVAASTVAPE- 120

Query: 121 VVAGAAAAEEKKAEE 136
                A  E  K EE
Sbjct: 121 ----PANDENSKEEE 130

The following BLAST results are available for this feature:

BLAST of Cla019790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y2416_ARATH	1.9e-39	76.15	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1	[more]

BLAST of Cla019790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG69_CUCSA	1.1e-62	97.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010240 PE=4 SV=1	[more]
A0A0S3SQ60_PHAAN	1.4e-49	82.58	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G160900 PE=...	[more]
A0A0L9THG8_PHAAN	1.4e-49	82.58	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan845s000300 PE=4 SV=1	[more]
W9RI44_9ROSA	9.2e-49	80.74	Uncharacterized protein OS=Morus notabilis GN=L484_024556 PE=4 SV=1	[more]
A0A067JVY8_JATCU	5.9e-48	89.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23517 PE=4 SV=1	[more]

BLAST of Cla019790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443233\|ref\|XP_004139384.1\|	1.6e-62	97.16	PREDICTED: uncharacterized protein At2g34160 [Cucumis sativus]	[more]
gi\|659070696\|ref\|XP_008456222.1\|	2.7e-62	95.77	PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]	[more]
gi\|1009117586\|ref\|XP_015875397.1\|	1.6e-49	80.56	PREDICTED: uncharacterized protein At2g34160 [Ziziphus jujuba]	[more]
gi\|920683230\|gb\|KOM29975.1\|	2.0e-49	82.58	hypothetical protein LR48_Vigan845s000300 [Vigna angularis]	[more]
gi\|703121217\|ref\|XP_010102274.1\|	1.3e-48	80.74	Uncharacterized protein L484_024556 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002775	DNA/RNA-bd_Alba-like
IPR014560	UCP030333_Alba

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0008150	biological_process
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019790	Cla019790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	GENE3D	G3DSA:3.30.110.20		coord: 16..121 score: 3.1
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 18..80 score: 2.1
IPR002775	DNA/RNA-binding protein Alba-like	unknown	SSF82704	AlbA-like	coord: 17..112 score: 1.23
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIR	PIRSF030333	UCP030333_Alba	coord: 1..139 score: 5.0
None	No IPR available	PANTHER	PTHR31947	FAMILY NOT NAMED	coord: 10..139 score: 4.2
None	No IPR available	PANTHER	PTHR31947:SF5	SUBFAMILY NOT NAMED	coord: 10..139 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019790	Cla97C02G042600	Watermelon (97103) v2	wmwmbB316
Cla019790	Csa2G010240	Cucumber (Chinese Long) v2	cuwmB147
Cla019790	MELO3C004397	Melon (DHL92) v3.5.1	mewmB418
Cla019790	ClCG02G016810	Watermelon (Charleston Gray)	wcgwmB197
Cla019790	CSPI02G02790	Wild cucumber (PI 183967)	cpiwmB149
Cla019790	Cucsa.133090	Cucumber (Gy14) v1	cgywmB223
Cla019790	CmaCh12G011330	Cucurbita maxima (Rimu)	cmawmB170
Cla019790	CmaCh05G012170	Cucurbita maxima (Rimu)	cmawmB764
Cla019790	CmoCh12G011530	Cucurbita moschata (Rifu)	cmowmB156
Cla019790	Lsi11G004260	Bottle gourd (USVL1VR-Ls)	lsiwmB107
Cla019790	Cp4.1LG00g04330	Cucurbita pepo (Zucchini)	cpewmB016
Cla019790	Cp4.1LG11g09900	Cucurbita pepo (Zucchini)	cpewmB113
Cla019790	Cp4.1LG07g09860	Cucurbita pepo (Zucchini)	cpewmB806
Cla019790	CsGy2G002900	Cucumber (Gy14) v2	cgybwmB140
Cla019790	MELO3C004397.2	Melon (DHL92) v3.6.1	medwmB407
Cla019790	Carg17605	Silver-seed gourd	carwmB0714
Cla019790	Carg22995	Silver-seed gourd	carwmB1071

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla019790	Cla021562	Watermelon (97103) v1	wmwmB133

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019790	Cucumber (Chinese Long) v3	cucwmB159
Cla019790	Wax gourd	wgowmB133
Cla019790	Watermelon (97103) v1	wmwmB162
Cla019790	Cucurbita moschata (Rifu)	cmowmB757