Cla014586 (gene) Watermelon (97103) v1

Overview
NameCla014586
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionSmall nuclear ribonucleoprotein-like protein (AHRD V1 ***- B3TLL8_ELAGV); contains Interpro domain(s) IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
LocationChr7 : 20574323 .. 20574760 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGTGTTAAAAACAACACTCAGGTATGCATTTGTTTTTGTGTGTTTAACAGTTGCACTTAGTAAATCACAGGCATAACTTTTCAGGTGAAAATGATATTTATATGTTGTGGACCTCCTTGACAGGTTCTCATAAATTGTCGCAATAATAAGAAGCTTTTGGGACGTGTAAGGGCCTTCGACCGACATTGTAATATGGTTCTGGAAAATGTTAGAGAGATGTGGACTGAGGTTTGTTTTATTGATGCGTGCTTACTCTTTTCCTTGCTTTGTATAGACTCAAGAGTCATGTATCTCCTGTCTTATTACAATGACTAGGTACCAAAAACTGGGAAGGGCAAGAAAAAGGCTCAGCCTGTTAACAAGGACAGATTCATCAGTAAGATGTTCCTGAGAGGAGACTCGGTCATTATCGTTCTTAGGAATCCCAAGTAA

mRNA sequence

ATGATGAGTGTTAAAAACAACACTCAGGTTCTCATAAATTGTCGCAATAATAAGAAGCTTTTGGGACGTGTAAGGGCCTTCGACCGACATTGTAATATGGTTCTGGAAAATGTTAGAGAGATGTGGACTGAGGTACCAAAAACTGGGAAGGGCAAGAAAAAGGCTCAGCCTGTTAACAAGGACAGATTCATCAGTAAGATGTTCCTGAGAGGAGACTCGGTCATTATCGTTCTTAGGAATCCCAAGTAA

Coding sequence (CDS)

ATGATGAGTGTTAAAAACAACACTCAGGTTCTCATAAATTGTCGCAATAATAAGAAGCTTTTGGGACGTGTAAGGGCCTTCGACCGACATTGTAATATGGTTCTGGAAAATGTTAGAGAGATGTGGACTGAGGTACCAAAAACTGGGAAGGGCAAGAAAAAGGCTCAGCCTGTTAACAAGGACAGATTCATCAGTAAGATGTTCCTGAGAGGAGACTCGGTCATTATCGTTCTTAGGAATCCCAAGTAA

Protein sequence

MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
Homology
[Close]
BLAST of Cla014586 vs. Swiss-Prot
Match: SMD2_BOVIN (Small nuclear ribonucleoprotein Sm D2 OS=Bos taurus GN=SNRPD2 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-37
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 3   SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDR 62
           SVKNNTQVLINCRNNKKLLGRV+AFDRHCNMVLENV+EMWTEVPK+GKGKKK++PVNKDR
Sbjct: 35  SVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDR 94

Query: 63  FISKMFLRGDSVIIVLRNP 82
           +ISKMFLRGDSVI+VLRNP
Sbjct: 95  YISKMFLRGDSVIVVLRNP 113

[Close]
BLAST of Cla014586 vs. Swiss-Prot
Match: SMD2_HUMAN (Small nuclear ribonucleoprotein Sm D2 OS=Homo sapiens GN=SNRPD2 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-37
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 3   SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDR 62
           SVKNNTQVLINCRNNKKLLGRV+AFDRHCNMVLENV+EMWTEVPK+GKGKKK++PVNKDR
Sbjct: 35  SVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDR 94

Query: 63  FISKMFLRGDSVIIVLRNP 82
           +ISKMFLRGDSVI+VLRNP
Sbjct: 95  YISKMFLRGDSVIVVLRNP 113

[Close]
BLAST of Cla014586 vs. Swiss-Prot
Match: SMD2_MOUSE (Small nuclear ribonucleoprotein Sm D2 OS=Mus musculus GN=Snrpd2 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-37
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 3   SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDR 62
           SVKNNTQVLINCRNNKKLLGRV+AFDRHCNMVLENV+EMWTEVPK+GKGKKK++PVNKDR
Sbjct: 35  SVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDR 94

Query: 63  FISKMFLRGDSVIIVLRNP 82
           +ISKMFLRGDSVI+VLRNP
Sbjct: 95  YISKMFLRGDSVIVVLRNP 113

[Close]
BLAST of Cla014586 vs. Swiss-Prot
Match: SMD2_DROME (Probable small nuclear ribonucleoprotein Sm D2 OS=Drosophila melanogaster GN=SmD2 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-37
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 1 

Query: 3   SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDR 62
           SVKNNTQVLINCRNNKKLLGRV+AFDRHCNMVLENV+EMWTE+P+TGKGKKK +PVNKDR
Sbjct: 34  SVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDR 93

Query: 63  FISKMFLRGDSVIIVLRNP 82
           FISKMFLRGDSVI+VLRNP
Sbjct: 94  FISKMFLRGDSVILVLRNP 112

[Close]
BLAST of Cla014586 vs. Swiss-Prot
Match: SMD2_DICDI (Probable small nuclear ribonucleoprotein Sm D2 OS=Dictyostelium discoideum GN=snrpd2 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-35
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           M SV NNTQVLIN RNNKKLLGRVRAFDRHCNMVLENV+E+WTEVPKT KGKKKA+P+NK
Sbjct: 24  MDSVNNNTQVLINVRNNKKLLGRVRAFDRHCNMVLENVKEIWTEVPKTAKGKKKAKPINK 83

Query: 61  DRFISKMFLRGDSVIIVLRNP 82
           DRFISKMFLRGDSVI+VL+NP
Sbjct: 84  DRFISKMFLRGDSVILVLKNP 104

[Close]
BLAST of Cla014586 vs. TrEMBL
Match: A0A151STX8_CAJCA (Putative small nuclear ribonucleoprotein Sm D2 OS=Cajanus cajan GN=KK1_004496 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 23  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 82

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 83  DRFISKMFLRGDSVIIVLRNPK 104

[Close]
BLAST of Cla014586 vs. TrEMBL
Match: G7LBH7_MEDTR (Small nuclear ribonucleoprotein OS=Medicago truncatula GN=MTR_8g105890 PE=4 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 43  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 102

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 103 DRFISKMFLRGDSVIIVLRNPK 124

[Close]
BLAST of Cla014586 vs. TrEMBL
Match: A0A0A0KUK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046730 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 107 MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 166

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 167 DRFISKMFLRGDSVIIVLRNPK 188

[Close]
BLAST of Cla014586 vs. TrEMBL
Match: G7LBH6_MEDTR (Small nuclear ribonucleoprotein OS=Medicago truncatula GN=MTR_8g105890 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 27  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 86

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 87  DRFISKMFLRGDSVIIVLRNPK 108

[Close]
BLAST of Cla014586 vs. TrEMBL
Match: A0A0S3QWM2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G011900 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 27  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 86

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 87  DRFISKMFLRGDSVIIVLRNPK 108

[Close]
BLAST of Cla014586 vs. NCBI nr
Match: gi|950930093|ref|XP_014503527.1| (PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Vigna radiata var. radiata])

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 27  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 86

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 87  DRFISKMFLRGDSVIIVLRNPK 108

[Close]
BLAST of Cla014586 vs. NCBI nr
Match: gi|922338755|ref|XP_013447367.1| (small nuclear ribonucleoprotein [Medicago truncatula])

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
          MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 1  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60

Query: 61 DRFISKMFLRGDSVIIVLRNPK 83
          DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61 DRFISKMFLRGDSVIIVLRNPK 82

[Close]
BLAST of Cla014586 vs. NCBI nr
Match: gi|449457536|ref|XP_004146504.1| (PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 26  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 85

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 86  DRFISKMFLRGDSVIIVLRNPK 107

[Close]
BLAST of Cla014586 vs. NCBI nr
Match: gi|224068340|ref|XP_002302713.1| (small nuclear ribonucleoprotein D2 [Populus trichocarpa])

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 27  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 86

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 87  DRFISKMFLRGDSVIIVLRNPK 108

[Close]
BLAST of Cla014586 vs. NCBI nr
Match: gi|950946639|ref|XP_014494508.1| (PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Vigna radiata var. radiata])

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1   MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 60
           MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK
Sbjct: 28  MMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNK 87

Query: 61  DRFISKMFLRGDSVIIVLRNPK 83
           DRFISKMFLRGDSVIIVLRNPK
Sbjct: 88  DRFISKMFLRGDSVIIVLRNPK 109

The following BLAST results are available for this feature:
BLAST of Cla014586 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SMD2_BOVIN2.3e-3791.14Small nuclear ribonucleoprotein Sm D2 OS=Bos taurus GN=SNRPD2 PE=3 SV=1[more]
SMD2_HUMAN2.3e-3791.14Small nuclear ribonucleoprotein Sm D2 OS=Homo sapiens GN=SNRPD2 PE=1 SV=1[more]
SMD2_MOUSE2.3e-3791.14Small nuclear ribonucleoprotein Sm D2 OS=Mus musculus GN=Snrpd2 PE=1 SV=1[more]
SMD2_DROME3.0e-3791.14Probable small nuclear ribonucleoprotein Sm D2 OS=Drosophila melanogaster GN=SmD... [more]
SMD2_DICDI1.3e-3587.65Probable small nuclear ribonucleoprotein Sm D2 OS=Dictyostelium discoideum GN=sn... [more]
BLAST of Cla014586 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151STX8_CAJCA1.7e-39100.00Putative small nuclear ribonucleoprotein Sm D2 OS=Cajanus cajan GN=KK1_004496 PE... [more]
G7LBH7_MEDTR1.7e-39100.00Small nuclear ribonucleoprotein OS=Medicago truncatula GN=MTR_8g105890 PE=4 SV=2[more]
A0A0A0KUK4_CUCSA1.7e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046730 PE=4 SV=1[more]
G7LBH6_MEDTR1.7e-39100.00Small nuclear ribonucleoprotein OS=Medicago truncatula GN=MTR_8g105890 PE=2 SV=1[more]
A0A0S3QWM2_PHAAN1.7e-39100.00Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G011900 PE=... [more]
BLAST of Cla014586 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|950930093|ref|XP_014503527.1|2.5e-39100.00PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Vigna radiata var. radiat... [more]
gi|922338755|ref|XP_013447367.1|2.5e-39100.00small nuclear ribonucleoprotein [Medicago truncatula][more]
gi|449457536|ref|XP_004146504.1|2.5e-39100.00PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Cucumis sativus][more]
gi|224068340|ref|XP_002302713.1|2.5e-39100.00small nuclear ribonucleoprotein D2 [Populus trichocarpa][more]
gi|950946639|ref|XP_014494508.1|2.5e-39100.00PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Vigna radiata var. radiat... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001163LSM_dom_euk/arc
IPR010920LSM_dom_sf
IPR027248Sm_D2
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Vocabulary: Cellular Component
TermDefinition
GO:0030532small nuclear ribonucleoprotein complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
biological_process GO:0016567 protein ubiquitination
biological_process GO:0000387 spliceosomal snRNP assembly
cellular_component GO:0030532 small nuclear ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0005686 U2 snRNP
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular_component GO:0005682 U5 snRNP
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU12362watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU39636watermelon EST collection version 2.0transcribed_cluster
WMU47199watermelon EST collection version 2.0transcribed_cluster
WMU61562watermelon EST collection version 2.0transcribed_cluster
WMU73841watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014586Cla014586.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU39636WMU39636transcribed_cluster
WMU47199WMU47199transcribed_cluster
WMU12362WMU12362transcribed_cluster
WMU61562WMU61562transcribed_cluster
WMU73841WMU73841transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001163LSM domain, eukaryotic/archaea-typePFAMPF01423LSMcoord: 4..77
score: 2.5
IPR001163LSM domain, eukaryotic/archaea-typeSMARTSM00651Sm3coord: 1..79
score: 6.6
IPR010920LSM domainunknownSSF50182Sm-like ribonucleoproteinscoord: 2..80
score: 1.52
IPR027248Small nuclear ribonucleoprotein Sm D2PANTHERPTHR12777SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2coord: 1..82
score: 2.4
NoneNo IPR availableGENE3DG3DSA:2.30.30.100coord: 2..82
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla014586Cla97C07G135540Watermelon (97103) v2wmwmbB166
Cla014586Csa4G046730Cucumber (Chinese Long) v2cuwmB310
Cla014586MELO3C016382Melon (DHL92) v3.5.1mewmB505
Cla014586ClCG07G008500Watermelon (Charleston Gray)wcgwmB364
Cla014586CSPI04G05510Wild cucumber (PI 183967)cpiwmB313
Cla014586Cucsa.106550Cucumber (Gy14) v1cgywmB147
Cla014586CmaCh16G006170Cucurbita maxima (Rimu)cmawmB307
Cla014586CmaCh04G007540Cucurbita maxima (Rimu)cmawmB677
Cla014586CmoCh16G006730Cucurbita moschata (Rifu)cmowmB301
Cla014586CmoCh04G008050Cucurbita moschata (Rifu)cmowmB671
Cla014586Lsi07G002570Bottle gourd (USVL1VR-Ls)lsiwmB439
Cla014586Cp4.1LG14g01890Cucurbita pepo (Zucchini)cpewmB218
Cla014586Cp4.1LG01g07090Cucurbita pepo (Zucchini)cpewmB420
Cla014586CsGy4G005390Cucumber (Gy14) v2cgybwmB288
Cla014586MELO3C016382.2Melon (DHL92) v3.6.1medwmB491
Cla014586Carg14152Silver-seed gourdcarwmB0940
Cla014586Carg05739Silver-seed gourdcarwmB1018
Cla014586CsaV3_4G005660Cucumber (Chinese Long) v3cucwmB322
Cla014586Bhi01G001835Wax gourdwgowmB192
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla014586Silver-seed gourdcarwmB0402
Cla014586Cucumber (Chinese Long) v3cucwmB509
Cla014586Watermelon (97103) v2wmwmbB142
Cla014586Wax gourdwgowmB177
Cla014586Watermelon (97103) v1wmwmB102
Cla014586Cucurbita maxima (Rimu)cmawmB625
Cla014586Cucurbita moschata (Rifu)cmowmB616
Cla014586Melon (DHL92) v3.5.1mewmB565
Cla014586Watermelon (Charleston Gray)wcgwmB126
Cla014586Cucumber (Chinese Long) v2cuwmB483
Cla014586Bottle gourd (USVL1VR-Ls)lsiwmB139
Cla014586Cucumber (Gy14) v2cgybwmB453
Cla014586Melon (DHL92) v3.6.1medwmB553