Cla014394 (gene) Watermelon (97103) v1

NameCla014394
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1); contains Interpro domain(s) IPR008470 Protein of unknown function DUF751
LocationChr1 : 30446871 .. 30447401 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCTCCTTCAGAACTCCATACTTCCCCACTTTCAAAACCCCACTTATTTCTCCTCCTTCATTTCAAATCAAGGCCATCTCCCCTCTCCGAACCCCTTTCCGGCCATTCGCTTCCTCTGCGCTGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTGACCCGTCGGATTCCAAGAAAATTGAAGCAACCCCAAGTGGGAACTCGAGGTTTTTGATCATCGGAGCTGTCTCGGTGGGCGTCGCCCTGTTTCTGATAGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGCCCTGAAGGTCCGTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATATGCAATTTACGCCCTTACTGTGAGTACTGGTGCTATTTACACTATTCTTCTCCCGATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGTTATTTTTGGAGGTGCCATTTTCATTATCTCTCAAGTTCTCTCTGCTATGGTTGGTGTTACTGAGTTTTCTTATGATTATTCCTATTGA

mRNA sequence

ATGGCCACCTCCTTCAGAACTCCATACTTCCCCACTTTCAAAACCCCACTTATTTCTCCTCCTTCATTTCAAATCAAGGCCATCTCCCCTCTCCGAACCCCTTTCCGGCCATTCGCTTCCTCTGCGCTGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTGACCCGTCGGATTCCAAGAAAATTGAAGCAACCCCAAGTGGGAACTCGAGGTTTTTGATCATCGGAGCTGTCTCGGTGGGCGTCGCCCTGTTTCTGATAGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGCCCTGAAGGTCCGTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATATGCAATTTACGCCCTTACTGTGAGTACTGGTGCTATTTACACTATTCTTCTCCCGATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGTTATTTTTGGAGGTGCCATTTTCATTATCTCTCAAGTTCTCTCTGCTATGGTTGGTGTTACTGAGTTTTCTTATGATTATTCCTATTGA

Coding sequence (CDS)

ATGGCCACCTCCTTCAGAACTCCATACTTCCCCACTTTCAAAACCCCACTTATTTCTCCTCCTTCATTTCAAATCAAGGCCATCTCCCCTCTCCGAACCCCTTTCCGGCCATTCGCTTCCTCTGCGCTGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTGACCCGTCGGATTCCAAGAAAATTGAAGCAACCCCAAGTGGGAACTCGAGGTTTTTGATCATCGGAGCTGTCTCGGTGGGCGTCGCCCTGTTTCTGATAGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGCCCTGAAGGTCCGTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATATGCAATTTACGCCCTTACTGTGAGTACTGGTGCTATTTACACTATTCTTCTCCCGATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGTTATTTTTGGAGGTGCCATTTTCATTATCTCTCAAGTTCTCTCTGCTATGGTTGGTGTTACTGAGTTTTCTTATGATTATTCCTATTGA

Protein sequence

MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
BLAST of Cla014394 vs. TrEMBL
Match: A0A0A0KHP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511100 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.5e-83
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 1

Query: 1   MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSK 60
           MATSF TP+FPTFKTPLIS PSF IK ISP+RTPFRP ASSA PQSPAKPLKIP P+D K
Sbjct: 1   MATSFVTPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFK 60

Query: 61  KIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYAIYALT 120
            IEATPSG SRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYA+YALT
Sbjct: 61  TIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYALYALT 120

Query: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY 177
           VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDY+Y
Sbjct: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYTY 176

BLAST of Cla014394 vs. TrEMBL
Match: D7T5G1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00160 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-45
Identity = 102/183 (55.74%), Postives = 130/183 (71.04%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + SP +      +PL   PF+P +S   P  P+           KPL       + 
Sbjct: 97  FQSHIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 156

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 157 QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 216

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG++FI+SQV+SAMVGVTEFSYD
Sbjct: 217 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIVSQVISAMVGVTEFSYD 276

BLAST of Cla014394 vs. TrEMBL
Match: D7TZ28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1543g00010 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + SP +      +PL   PF+P  S   P  P+           KPL       + 
Sbjct: 97  FQSHIPSPTNLPTPTANPLFLIPFKPRPSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 156

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 157 QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 216

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG+++I+SQV+SAMVGVTEFSYD
Sbjct: 217 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYD 276

BLAST of Cla014394 vs. TrEMBL
Match: A5ADD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023242 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.5e-44
Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + S  +      +PL   PF+P +S   P  P+           KPL       + 
Sbjct: 84  FQSHIPSSTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 143

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 144 QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 203

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG+++I+SQV+SAMVGVTEFSYD
Sbjct: 204 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYD 263

BLAST of Cla014394 vs. TrEMBL
Match: A0A067GT71_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029319mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-41
Identity = 99/177 (55.93%), Postives = 121/177 (68.36%), Query Frame = 1

Query: 3   TSFRTPYF--PTFKTPLISPPSFQIKAISPLRTPFRPFASSA-LPQSPAKPLKIPDPSDS 62
           T+F +P     TF T  I   +     I   R   R  AS A   +S  +   +     S
Sbjct: 19  TNFTSPSANPSTFTTMPIKTKTNSCNLIRLKRPLLRECASHAHSDKSTGEGEALERSPKS 78

Query: 63  KKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYAIYAL 122
            +++A   GNSR L++GA+SVG  L L+G D  +A+A GP+GPLVEEFW+NVRRYA+YAL
Sbjct: 79  SQVKAFTDGNSRVLVVGAISVGFVLLLMGMDDPKAMAFGPQGPLVEEFWENVRRYALYAL 138

Query: 123 TVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY 177
           TVSTGA+YTIL PI ELLKNPI+A+L+LVI GG IFIISQVLSAMVGVTEFSYDY Y
Sbjct: 139 TVSTGALYTILQPIFELLKNPISAILLLVILGGTIFIISQVLSAMVGVTEFSYDYGY 195

BLAST of Cla014394 vs. NCBI nr
Match: gi|449434036|ref|XP_004134802.1| (PREDICTED: uncharacterized protein LOC101208124 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-83
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 1

Query: 1   MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSK 60
           MATSF TP+FPTFKTPLIS PSF IK ISP+RTPFRP ASSA PQSPAKPLKIP P+D K
Sbjct: 1   MATSFVTPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFK 60

Query: 61  KIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYAIYALT 120
            IEATPSG SRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYA+YALT
Sbjct: 61  TIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYALYALT 120

Query: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY 177
           VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDY+Y
Sbjct: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYTY 176

BLAST of Cla014394 vs. NCBI nr
Match: gi|659079116|ref|XP_008440084.1| (PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 5.6e-81
Identity = 158/176 (89.77%), Postives = 162/176 (92.05%), Query Frame = 1

Query: 1   MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSK 60
           MATSF TP+FPTF+T LI  PSF +K I P+RTPFRP ASSA PQSPAKPLKIP PSD K
Sbjct: 1   MATSFITPFFPTFRTSLIPLPSFPVKPIPPIRTPFRPLASSASPQSPAKPLKIPHPSDFK 60

Query: 61  KIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYAIYALT 120
            IEATPSG SRFLIIGAVSVGVALFLIGCD ERALALGPEGPLVEEFWDNVRRYAIYALT
Sbjct: 61  TIEATPSGKSRFLIIGAVSVGVALFLIGCDSERALALGPEGPLVEEFWDNVRRYAIYALT 120

Query: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY 177
           VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
Sbjct: 121 VSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY 176

BLAST of Cla014394 vs. NCBI nr
Match: gi|297736708|emb|CBI25744.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 189.1 bits (479), Expect = 6.5e-45
Identity = 102/183 (55.74%), Postives = 130/183 (71.04%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + SP +      +PL   PF+P +S   P  P+           KPL       + 
Sbjct: 97  FQSHIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 156

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 157 QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 216

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG++FI+SQV+SAMVGVTEFSYD
Sbjct: 217 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIVSQVISAMVGVTEFSYD 276

BLAST of Cla014394 vs. NCBI nr
Match: gi|359495622|ref|XP_002268164.2| (PREDICTED: uncharacterized protein LOC100254484 [Vitis vinifera])

HSP 1 Score: 189.1 bits (479), Expect = 6.5e-45
Identity = 102/183 (55.74%), Postives = 130/183 (71.04%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + SP +      +PL   PF+P +S   P  P+           KPL       + 
Sbjct: 8   FQSHIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 67

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 68  QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 127

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG++FI+SQV+SAMVGVTEFSYD
Sbjct: 128 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIVSQVISAMVGVTEFSYD 187

BLAST of Cla014394 vs. NCBI nr
Match: gi|731439970|ref|XP_003635589.2| (PREDICTED: uncharacterized protein LOC100854249 [Vitis vinifera])

HSP 1 Score: 187.2 bits (474), Expect = 2.5e-44
Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1

Query: 13  FKTPLISPPSFQIKAISPL-RTPFRPFASSALPQSPA-----------KPL-------KI 72
           F++ + SP +      +PL   PF+P  S   P  P+           KPL       + 
Sbjct: 85  FQSHIPSPTNLPTPTANPLFLIPFKPRPSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRS 144

Query: 73  PDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 132
             PS  +  + + +G SRF++IGAVSVGV L L+G D  +ALALGPEGPL+EEFWDNVRR
Sbjct: 145 QKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRR 204

Query: 133 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 177
           YA+Y LTVSTGA+YT+ +PILELLKNPI+A+LVLVIFGG+++I+SQV+SAMVGVTEFSYD
Sbjct: 205 YALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYD 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KHP7_CUCSA2.5e-8391.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511100 PE=4 SV=1[more]
D7T5G1_VITVI4.5e-4555.74Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00160 PE=4 SV=... [more]
D7TZ28_VITVI1.7e-4455.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1543g00010 PE=4 SV=... [more]
A5ADD6_VITVI8.5e-4454.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023242 PE=4 SV=1[more]
A0A067GT71_CITSI1.0e-4155.93Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029319mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449434036|ref|XP_004134802.1|3.5e-8391.48PREDICTED: uncharacterized protein LOC101208124 [Cucumis sativus][more]
gi|659079116|ref|XP_008440084.1|5.6e-8189.77PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo][more]
gi|297736708|emb|CBI25744.3|6.5e-4555.74unnamed protein product [Vitis vinifera][more]
gi|359495622|ref|XP_002268164.2|6.5e-4555.74PREDICTED: uncharacterized protein LOC100254484 [Vitis vinifera][more]
gi|731439970|ref|XP_003635589.2|2.5e-4455.19PREDICTED: uncharacterized protein LOC100854249 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008470Uncharacterised_Ycf33
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005623 cell
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016209 antioxidant activity
molecular_function GO:0016491 oxidoreductase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU24853watermelon EST collection version 2.0transcribed_cluster
WMU30209watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU49169watermelon EST collection version 2.0transcribed_cluster
WMU53523watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014394Cla014394.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU24853WMU24853transcribed_cluster
WMU30209WMU30209transcribed_cluster
WMU49169WMU49169transcribed_cluster
WMU53523WMU53523transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008470Uncharacterised protein family Ycf33PFAMPF05421DUF751coord: 107..166
score: 8.0
NoneNo IPR availablePANTHERPTHR36049FAMILY NOT NAMEDcoord: 68..176
score: 4.5
NoneNo IPR availablePANTHERPTHR36049:SF3SUBFAMILY NOT NAMEDcoord: 68..176
score: 4.5