CmoCh07G003470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCTCTCTCAGAACTCGAATCCACTTCTCAATCTTCCCCACTTCAAAAAACCCACCAATTTCTCCCCCTTTAATTCCGATCAACGTCCCGACCCCTCTTAGAAGCCCTTTCCGGCCACTTGCATCCTCTTCGCCGCCGAAATCTCCGGCCAAATCCCCGAAGAATACTTGGCCATCAGATCTCAAGGCAATCGAAGCACACCCAATCGAGAGCTCGAGGTTTCTGATCATCGGAGCCGTTTCAGTGGGCGTTGCCCTGTTTCTGATGGGTTCCGACGGGGAAAGGGCTTTGGCTTTGGGCCCTGAAGGGCCTTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATACGCGATTTACGCGGTTACTGTGAGTAGTGGTGCTCTTTACACTATCCTTCTCCCCATTTTGGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTAGCTATTTTTGGGGGTACCATTTTCATTATCTCTCAAGTGCTTTCTGCTATGGTTGGTGTCAATGAGTTTTCTTATGAATATGCCTATTGA ATGGCCACCTCTCTCAGAACTCGAATCCACTTCTCAATCTTCCCCACTTCAAAAAACCCACCAATTTCTCCCCCTTTAATTCCGATCAACGTCCCGACCCCTCTTAGAAGCCCTTTCCGGCCACTTGCATCCTCTTCGCCGCCGAAATCTCCGGCCAAATCCCCGAAGAATACTTGGCCATCAGATCTCAAGGCAATCGAAGCACACCCAATCGAGAGCTCGAGGTTTCTGATCATCGGAGCCGTTTCAGTGGGCGTTGCCCTGTTTCTGATGGGTTCCGACGGGGAAAGGGCTTTGGCTTTGGGCCCTGAAGGGCCTTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATACGCGATTTACGCGGTTACTGTGAGTAGTGGTGCTCTTTACACTATCCTTCTCCCCATTTTGGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTAGCTATTTTTGGGGGTACCATTTTCATTATCTCTCAAGTGCTTTCTGCTATGGTTGGTGTCAATGAGTTTTCTTATGAATATGCCTATTGA ATGGCCACCTCTCTCAGAACTCGAATCCACTTCTCAATCTTCCCCACTTCAAAAAACCCACCAATTTCTCCCCCTTTAATTCCGATCAACGTCCCGACCCCTCTTAGAAGCCCTTTCCGGCCACTTGCATCCTCTTCGCCGCCGAAATCTCCGGCCAAATCCCCGAAGAATACTTGGCCATCAGATCTCAAGGCAATCGAAGCACACCCAATCGAGAGCTCGAGGTTTCTGATCATCGGAGCCGTTTCAGTGGGCGTTGCCCTGTTTCTGATGGGTTCCGACGGGGAAAGGGCTTTGGCTTTGGGCCCTGAAGGGCCTTTGGTGGAGGAATTTTGGGACAATGTTAGAAGATACGCGATTTACGCGGTTACTGTGAGTAGTGGTGCTCTTTACACTATCCTTCTCCCCATTTTGGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTAGCTATTTTTGGGGGTACCATTTTCATTATCTCTCAAGTGCTTTCTGCTATGGTTGGTGTCAATGAGTTTTCTTATGAATATGCCTATTGA
BLAST of CmoCh07G003470 vs. TrEMBL
Match: A0A0A0KHP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511100 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.0e-60 Identity = 135/180 (75.00%), Postives = 147/180 (81.67%), Query Frame = 1
BLAST of CmoCh07G003470 vs. TrEMBL
Match: D7T5G1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00160 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 8.5e-39 Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 1
BLAST of CmoCh07G003470 vs. TrEMBL
Match: D7TZ28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1543g00010 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38 Identity = 98/189 (51.85%), Postives = 131/189 (69.31%), Query Frame = 1
BLAST of CmoCh07G003470 vs. TrEMBL
Match: A5ADD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023242 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.2e-38 Identity = 96/188 (51.06%), Postives = 129/188 (68.62%), Query Frame = 1
BLAST of CmoCh07G003470 vs. TrEMBL
Match: A0A061GIF1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030411 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-37 Identity = 78/107 (72.90%), Postives = 98/107 (91.59%), Query Frame = 1
BLAST of CmoCh07G003470 vs. TAIR10
Match: AT4G16410.1 (AT4G16410.1 unknown protein) HSP 1 Score: 142.5 bits (358), Expect = 2.5e-34 Identity = 67/107 (62.62%), Postives = 91/107 (85.05%), Query Frame = 1
BLAST of CmoCh07G003470 vs. NCBI nr
Match: gi|449434036|ref|XP_004134802.1| (PREDICTED: uncharacterized protein LOC101208124 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60 Identity = 135/180 (75.00%), Postives = 147/180 (81.67%), Query Frame = 1
BLAST of CmoCh07G003470 vs. NCBI nr
Match: gi|659079116|ref|XP_008440084.1| (PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo]) HSP 1 Score: 230.7 bits (587), Expect = 2.0e-57 Identity = 131/180 (72.78%), Postives = 143/180 (79.44%), Query Frame = 1
BLAST of CmoCh07G003470 vs. NCBI nr
Match: gi|802681929|ref|XP_012082180.1| (PREDICTED: uncharacterized protein LOC105642100 [Jatropha curcas]) HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1
BLAST of CmoCh07G003470 vs. NCBI nr
Match: gi|297736708|emb|CBI25744.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38 Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 1
BLAST of CmoCh07G003470 vs. NCBI nr
Match: gi|359495622|ref|XP_002268164.2| (PREDICTED: uncharacterized protein LOC100254484 [Vitis vinifera]) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38 Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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