Carg00504 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00504
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Peroxiredoxin chloroplastic-like
Location	Cucurbita_argyrosperma_scaffold_014 : 73800 .. 74345 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCTCTTTCAGATCCCGAATCCACCACGTCCCAATCTCCCCCACTTTCAAAAACCCCTCTGTTTCTCCTCCTCCATTTCCAATCAAGGCCACTTCCCCTCTCAGAGGCTCTTTCCGGCCTCTCGCAGCCTCTGCGCCGCCGCAATCCCCCGCCAAACCCTTAAAAACTCCTCAGCCGTTGGATTTCAAGATAATCGACGAAACCCCAATTGGGAACTCTAGGTTTCTGATCATCGGAGCTGTCTCGGTGGGCGTTGCTCTGTTTCTGATGGGTTGCGATGGCGATAGGGCTCTGGCTTTGGGGCCTGAAGGGCCGTTGGTGGAGGAATTCTGGGACAACGTAAGAAGATACGCAATTTACGCTGTCACTGTAAGTTCGGGTGCTCTTTACACTATTCTTCTTCCCATATTCGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCGTTATTTCTCAAGTTCTATCTGCTATGGTTGGCGTCAATGAGTTTTCTTATGATTATGCCTATTGA

mRNA sequence

ATGGCCACCTCTTTCAGATCCCGAATCCACCACGTCCCAATCTCCCCCACTTTCAAAAACCCCTCTGTTTCTCCTCCTCCATTTCCAATCAAGGCCACTTCCCCTCTCAGAGGCTCTTTCCGGCCTCTCGCAGCCTCTGCGCCGCCGCAATCCCCCGCCAAACCCTTAAAAACTCCTCAGCCGTTGGATTTCAAGATAATCGACGAAACCCCAATTGGGAACTCTAGGTTTCTGATCATCGGAGCTGTCTCGGTGGGCGTTGCTCTGTTTCTGATGGGTTGCGATGGCGATAGGGCTCTGGCTTTGGGGCCTGAAGGGCCGTTGGTGGAGGAATTCTGGGACAACGTAAGAAGATACGCAATTTACGCTGTCACTGTAAGTTCGGGTGCTCTTTACACTATTCTTCTTCCCATATTCGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCGTTATTTCTCAAGTTCTATCTGCTATGGTTGGCGTCAATGAGTTTTCTTATGATTATGCCTATTGA

Coding sequence (CDS)

ATGGCCACCTCTTTCAGATCCCGAATCCACCACGTCCCAATCTCCCCCACTTTCAAAAACCCCTCTGTTTCTCCTCCTCCATTTCCAATCAAGGCCACTTCCCCTCTCAGAGGCTCTTTCCGGCCTCTCGCAGCCTCTGCGCCGCCGCAATCCCCCGCCAAACCCTTAAAAACTCCTCAGCCGTTGGATTTCAAGATAATCGACGAAACCCCAATTGGGAACTCTAGGTTTCTGATCATCGGAGCTGTCTCGGTGGGCGTTGCTCTGTTTCTGATGGGTTGCGATGGCGATAGGGCTCTGGCTTTGGGGCCTGAAGGGCCGTTGGTGGAGGAATTCTGGGACAACGTAAGAAGATACGCAATTTACGCTGTCACTGTAAGTTCGGGTGCTCTTTACACTATTCTTCTTCCCATATTCGAGCTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCGTTATTTCTCAAGTTCTATCTGCTATGGTTGGCGTCAATGAGTTTTCTTATGATTATGCCTATTGA

Protein sequence

MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

Homology

[Close]

BLAST of Carg00504 vs. NCBI nr
Match: XP_022949889.1 (uncharacterized protein LOC111453148 [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 2.0e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ 60
           MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ
Sbjct: 1   MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ 60

Query: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120
           PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA
Sbjct: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120

Query: 121 IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180
           IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA
Sbjct: 121 IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180

Query: 181 Y 182
           Y
Sbjct: 181 Y 181

[Close]

BLAST of Carg00504 vs. NCBI nr
Match: XP_022979034.1 (uncharacterized protein LOC111478796 [Cucurbita maxima])

HSP 1 Score: 313.5 bits (802), Expect = 4.6e-82
Identity = 164/181 (90.61%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ 60
           MATSFRSRIHH PISPTFK+PSVSPPPFPIKATSPLRG FRPLAASA         KTPQ
Sbjct: 1   MATSFRSRIHHFPISPTFKSPSVSPPPFPIKATSPLRGPFRPLAASAXXXXXXXXXKTPQ 60

Query: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120
           PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGC+G+RALALGPEGPLVEEFWDNVRRYA
Sbjct: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCNGERALALGPEGPLVEEFWDNVRRYA 120

Query: 121 IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180
           IYAVTVS+GALYTILLPI ELLKNPITAVLVLAI GGAIFVISQVLSAMVGVNEFSYDYA
Sbjct: 121 IYAVTVSTGALYTILLPILELLKNPITAVLVLAILGGAIFVISQVLSAMVGVNEFSYDYA 180

Query: 181 Y 182
           Y
Sbjct: 181 Y 181

[Close]

BLAST of Carg00504 vs. NCBI nr
Match: XP_023543366.1 (uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 9.9e-77
Identity = 157/181 (86.74%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ 60
           MATSFRSRIHH PISPTFKNPSVSPPPFPIKATSPLRG                      
Sbjct: 1   MATSFRSRIHHFPISPTFKNPSVSPPPFPIKATSPLRGXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120
           PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA
Sbjct: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120

Query: 121 IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180
           IYAVTVS+GALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA
Sbjct: 121 IYAVTVSTGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180

Query: 181 Y 182
           Y
Sbjct: 181 Y 181

[Close]

BLAST of Carg00504 vs. NCBI nr
Match: XP_022133418.1 (uncharacterized protein LOC111005989 [Momordica charantia])

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 127/181 (70.17%), Postives = 135/181 (74.59%), Query Frame = 0


Query: 1   MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQ 60
           MATSFRSRI H P  P FKNP +SP   PI A  PL           P   PAK     +
Sbjct: 1   MATSFRSRI-HFPNFPLFKNPPISPRLLPINAAPPLXXXXXXXXXXXP---PAKSRPIAE 60

Query: 61  PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYA 120
           P D KIID  P   SR LI+GAVSVGV LFLMGCD   A ALGPEGPLVEEFWDNVRRYA
Sbjct: 61  PSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEGPLVEEFWDNVRRYA 120

Query: 121 IYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYA 180
           IYAVTVS+GALYTI LPIFELLKNPI+AVLVLAIFGG IF++SQVLSAMVGV+EFSYDYA
Sbjct: 121 IYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYA 175

Query: 181 Y 182
           Y
Sbjct: 181 Y 175

[Close]

BLAST of Carg00504 vs. NCBI nr
Match: XP_004134802.1 (PREDICTED: uncharacterized protein LOC101208124 [Cucumis sativus] >KGN49043.1 hypothetical protein Csa_6G511100 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 5.5e-51
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 59  PQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRR 118
           P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RALALGPEGPLVEEFWDNVRR
Sbjct: 54  PHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 113

Query: 119 YAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYD 178
           YA+YA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYD
Sbjct: 114 YALYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 173

Query: 179 YAY 182
           Y Y
Sbjct: 174 YTY 176

[Close]

BLAST of Carg00504 vs. TAIR10
Match: AT4G16410.1 (unknown protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34
Identity = 66/107 (61.68%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 76  RFLIIGAVSVGVALFL-MGCDGDRALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTI 135
           R+ ++G VSVG+ + L +G D ++A+ALGPEGPL+EEFWDNVRRY +YA+TVS+GAL  +
Sbjct: 79  RYAVVGGVSVGLMMVLVLGMDAEKAMALGPEGPLMEEFWDNVRRYGLYALTVSTGALSAV 138

Query: 136 LLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY 182
             PIFELLKNPI+A+L+L I GG+ +++SQV+SAM+GVNEF+Y Y+Y
Sbjct: 139 FEPIFELLKNPISAILILLILGGSFYIVSQVVSAMIGVNEFAYQYSY 185

[Close]

BLAST of Carg00504 vs. TrEMBL
Match: tr|A0A0A0KHP7|A0A0A0KHP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511100 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.6e-51
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 59  PQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRR 118
           P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RALALGPEGPLVEEFWDNVRR
Sbjct: 54  PHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRR 113

Query: 119 YAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYD 178
           YA+YA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYD
Sbjct: 114 YALYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 173

Query: 179 YAY 182
           Y Y
Sbjct: 174 YTY 176

[Close]

BLAST of Carg00504 vs. TrEMBL
Match: tr|A0A1S3B114|A0A1S3B114_CUCME (uncharacterized protein LOC103484667 OS=Cucumis melo OX=3656 GN=LOC103484667 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.0e-50
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 59  PQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRR 118
           P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCD +RALALGPEGPLVEEFWDNVRR
Sbjct: 54  PHPSDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDSERALALGPEGPLVEEFWDNVRR 113

Query: 119 YAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYD 178
           YAIYA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYD
Sbjct: 114 YAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYD 173

Query: 179 YAY 182
           Y+Y
Sbjct: 174 YSY 176

[Close]

BLAST of Carg00504 vs. TrEMBL
Match: tr|A5ADD6|A5ADD6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023242 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39
Identity = 95/180 (52.78%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 11  HVPISPTFKNPSVSPP-PFPIKATSPLRGSFRPLAASAPPQSPA-KPL-------KTPQP 70
           H+P S     P+ +P    P K  S L    +P + S P +    KPL       ++ +P
Sbjct: 87  HIPSSTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRSQKP 146

Query: 71  LDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYAI 130
              +    +  G SRF++IGAVSVGV L LMG D  +ALALGPEGPL+EEFWDNVRRYA+
Sbjct: 147 SKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRRYAL 206

Query: 131 YAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY 182
           Y +TVS+GA+YT+ +PI ELLKNPI+A+LVL IFGG+++++SQV+SAMVGV EFSYDY+Y
Sbjct: 207 YFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYDYSY 266

[Close]

BLAST of Carg00504 vs. TrEMBL
Match: tr|D7TZ28|D7TZ28_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1543g00010 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.4e-39
Identity = 94/171 (54.97%), Postives = 121/171 (70.76%), Query Frame = 0


Query: 12  VPISPTFKNPSVSPPPFPIKATSPLRGSF-RPLAASAPPQSPAKPLKTPQPLDFKIIDET 71
           +P  P    PS++ P  P   + P RG   +PL +S       KP K       +    +
Sbjct: 118 IPFKP---RPSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRSQKPSKE------EFCQVS 177

Query: 72  PIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYAIYAVTVSSGA 131
             G SRF++IGAVSVGV L LMG D  +ALALGPEGPL+EEFWDNVRRYA+Y +TVS+GA
Sbjct: 178 ANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRRYALYFLTVSTGA 237

Query: 132 LYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY 182
           +YT+ +PI ELLKNPI+A+LVL IFGG+++++SQV+SAMVGV EFSYDY+Y
Sbjct: 238 VYTVFVPILELLKNPISAILVLVIFGGSLYIVSQVISAMVGVTEFSYDYSY 279

[Close]

BLAST of Carg00504 vs. TrEMBL
Match: tr|D7T5G1|D7T5G1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00160 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.1e-39
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 11  HVPISPTFKNPSVSPP-PFPIKATSPLRGSFRPLAASAPPQSPA-KPL-------KTPQP 70
           H+P       P+ +P    P K  S L    +P + S P +    KPL       ++ +P
Sbjct: 100 HIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHINKPLVSSGLTPRSQKP 159

Query: 71  LDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVEEFWDNVRRYAI 130
              +    +  G SRF++IGAVSVGV L LMG D  +ALALGPEGPL+EEFWDNVRRYA+
Sbjct: 160 SKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDEHKALALGPEGPLMEEFWDNVRRYAL 219

Query: 131 YAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY 182
           Y +TVS+GA+YT+ +PI ELLKNPI+A+LVL IFGG++F++SQV+SAMVGV EFSYDY+Y
Sbjct: 220 YFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIVSQVISAMVGVTEFSYDYSY 279

The following BLAST results are available for this feature:

BLAST of Carg00504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949889.1	2.0e-93	100.00	uncharacterized protein LOC111453148 [Cucurbita moschata]	[more]
XP_022979034.1	4.6e-82	90.61	uncharacterized protein LOC111478796 [Cucurbita maxima]	[more]
XP_023543366.1	9.9e-77	86.74	uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]	[more]
XP_022133418.1	1.1e-54	70.17	uncharacterized protein LOC111005989 [Momordica charantia]	[more]
XP_004134802.1	5.5e-51	85.37	PREDICTED: uncharacterized protein LOC101208124 [Cucumis sativus] >KGN49043.1 hy...	[more]

BLAST of Carg00504 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16410.1	1.1e-34	61.68	unknown protein	[more]

BLAST of Carg00504 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00504 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHP7\|A0A0A0KHP7_CUCSA	3.6e-51	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511100 PE=4 SV=1	[more]
tr\|A0A1S3B114\|A0A1S3B114_CUCME	1.0e-50	85.37	uncharacterized protein LOC103484667 OS=Cucumis melo OX=3656 GN=LOC103484667 PE=...	[more]
tr\|A5ADD6\|A5ADD6_VITVI	4.1e-39	52.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023242 PE=4 SV=1	[more]
tr\|D7TZ28\|D7TZ28_VITVI	5.4e-39	54.97	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1543g00010 PE=4 SV=...	[more]
tr\|D7T5G1\|D7T5G1_VITVI	7.1e-39	52.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00160 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008470	Uncharacterised_Ycf33

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00504-RA	Carg00504-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008470	Uncharacterised protein family Ycf33	PFAM	PF05421	DUF751	coord: 112..171 e-value: 5.9E-20 score: 71.6
None	No IPR available	PANTHER	PTHR36049	FAMILY NOT NAMED	coord: 73..181

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00504	Cla014394	Watermelon (97103) v1	carwmB0407
Carg00504	Csa6G511100	Cucumber (Chinese Long) v2	carcuB0441
Carg00504	MELO3C007446	Melon (DHL92) v3.5.1	carmeB0413
Carg00504	ClCG01G021340	Watermelon (Charleston Gray)	carwcgB0397
Carg00504	Cucsa.044670	Cucumber (Gy14) v1	carcgyB0466
Carg00504	CmaCh03G005830	Cucurbita maxima (Rimu)	carcmaB0567
Carg00504	CmaCh07G003560	Cucurbita maxima (Rimu)	carcmaB0571
Carg00504	CmoCh03G006090	Cucurbita moschata (Rifu)	carcmoB0551
Carg00504	CmoCh07G003470	Cucurbita moschata (Rifu)	carcmoB0554
Carg00504	Lsi01G004910	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00504	Cp4.1LG10g09910	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00504	Cp4.1LG19g08020	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00504	MELO3C007446.2	Melon (DHL92) v3.6.1	carmedB0417
Carg00504	CsaV3_6G048350	Cucumber (Chinese Long) v3	carcucB0442
Carg00504	Cla97C01G020920	Watermelon (97103) v2	carwmbB0426
Carg00504	Bhi03G000512	Wax gourd	carwgoB0488

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00504	Carg07882	Silver-seed gourd	carcarB425

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00504	Cucumber (Gy14) v2	carcgybB0408
Carg00504	Cucumber (Gy14) v2	carcgybB0418
Carg00504	Cucurbita maxima (Rimu)	carcmaB0559
Carg00504	Cucurbita maxima (Rimu)	carcmaB0562
Carg00504	Cucurbita pepo (Zucchini)	carcpeB0564
Carg00504	Wild cucumber (PI 183967)	carcpiB0435
Carg00504	Wild cucumber (PI 183967)	carcpiB0446