Cla007016 (gene) Watermelon (97103) v1

Overview
NameCla007016
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRhomboid protein (AHRD V1 ***- E5GC88_CUCME); contains Interpro domain(s) IPR002610 Peptidase S54, rhomboid
LocationChr6 : 839528 .. 840343 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCACATGAATGCACTGCCAACTGGAGATGTAGAGATTGTATGA

mRNA sequence

ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCACATGAATGCACTGCCAACTGGAGATGTAGAGATTGTATGA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCACATGAATGCACTGCCAACTGGAGATGTAGAGATTGTATGA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTDPSLPSVRFLSSGNGRTLHMNALPTGDVEIV
Homology
[Close]
BLAST of Cla007016 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 2.6e-125
Identity = 215/271 (79.34%), Postives = 243/271 (89.67%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTL  +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]
BLAST of Cla007016 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 53/186 (28.49%), Postives = 88/186 (47.31%), Query Frame = 1 

Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L A+ Q       +   L   +   +  G++ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   V  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 190

Query: 189 GIIVGY 194
           G ++GY
Sbjct: 193 GAVMGY 190

[Close]
BLAST of Cla007016 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-11
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           IWF++  +   YS   LS E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  IWFFLNPQKPLYSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVL 158

Query: 145 LSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+   +  P  SF GHL+GI+VG     G
Sbjct: 159 NNHYCPGGFVNILGF-PVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of Cla007016 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.6e-10
Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           +WF++      Y H  +S E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  VWFFLNPWKPLY-HSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVL 158

Query: 145 LSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+      P  SF GHL+GI+VG     G
Sbjct: 159 SNHYCPGGFVNILGF-PVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of Cla007016 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 1 

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]
BLAST of Cla007016 vs. TrEMBL
Match: E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 6.5e-152
Identity = 268/271 (98.89%), Postives = 269/271 (99.26%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of Cla007016 vs. TrEMBL
Match: A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.9e-151
Identity = 267/271 (98.52%), Postives = 269/271 (99.26%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of Cla007016 vs. TrEMBL
Match: W9RRH2_9ROSA (Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.0e-136
Identity = 237/271 (87.45%), Postives = 257/271 (94.83%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLP+VRFL+SGNGRTL M++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

[Close]
BLAST of Cla007016 vs. TrEMBL
Match: A5BJP0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.6e-134
Identity = 234/271 (86.35%), Postives = 254/271 (93.73%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIG+CCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSA S
Sbjct: 1   MGKPLFYEILEKPATSCIIGLCCAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+G+GV +YL YTLVLV+LSG LVLG YH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGSYHVLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWG+IHGM N+WA SMLGW+VLVF+FSLK+S  Y+F FLEIE VT
Sbjct: 181 SFLGHLSGIIVGYAIAWGVIHGMTNYWAVSMLGWIVLVFVFSLKRSGAYDFSFLEIEPVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFL+SGNGRTL M+ALP G  ++V
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSALPVGGSDLV 271

[Close]
BLAST of Cla007016 vs. TrEMBL
Match: I1LQD5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G051500 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.1e-134
Identity = 236/271 (87.08%), Postives = 254/271 (93.73%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC  IWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLGV YYL YTLVLV+LSGVLVL MYHLLIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAIAWGLIHGM+N+WA S+LGW+ LVF+ SLK+S   + +FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFL+S +GRTL M+ALP G+VEIV
Sbjct: 241 DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271

[Close]
BLAST of Cla007016 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 544.7 bits (1402), Expect = 9.4e-152
Identity = 268/271 (98.89%), Postives = 269/271 (99.26%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of Cla007016 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 543.1 bits (1398), Expect = 2.7e-151
Identity = 267/271 (98.52%), Postives = 269/271 (99.26%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of Cla007016 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 497.3 bits (1279), Expect = 1.7e-137
Identity = 239/271 (88.19%), Postives = 257/271 (94.83%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATS IIGICCAIWFYIQKK+IGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSCIIGICCAIWFYIQKKHIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LGH+GLGV YYL Y+LV+V+LSGVLVLGMYH+LIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+ +VFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLPSVRFL SGNGRTL M+ALP    E+V
Sbjct: 241 DPSLPSVRFLGSGNGRTLQMSALPVAGTELV 271

[Close]
BLAST of Cla007016 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 494.2 bits (1271), Expect = 1.5e-136
Identity = 237/271 (87.45%), Postives = 257/271 (94.83%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEIV 272
           DPSLP+VRFL+SGNGRTL M++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

[Close]
BLAST of Cla007016 vs. NCBI nr
Match: gi|802554988|ref|XP_012065193.1| (PREDICTED: rhomboid protein 2 [Jatropha curcas])

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 236/270 (87.41%), Postives = 257/270 (95.19%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLG+ YYLHYTLVLV+LSG+LVLGMYH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGIVEQLGHMGLGMAYYLHYTLVLVVLSGLLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+V++F+FSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWIVVIFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLHMNALPTGDVEI 271
           DPSLPSVRFL  G+GRTL M+ALP   VE+
Sbjct: 241 DPSLPSVRFL--GSGRTLQMSALPLEGVEV 268

The following BLAST results are available for this feature:
BLAST of Cla007016 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL13_ARATH2.6e-12579.34RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1[more]
RBD2_SCHPO1.5e-1128.49Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd... [more]
RHBL4_HUMAN9.5e-1130.11Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1[more]
RHBL4_MOUSE3.6e-1028.98Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1[more]
RBL14_ARATH6.1e-1033.33Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV... [more]
BLAST of Cla007016 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GC88_CUCME6.5e-15298.89Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K961_CUCSA1.9e-15198.52Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1[more]
W9RRH2_9ROSA1.0e-13687.45Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1[more]
A5BJP0_VITVI1.6e-13486.35Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=... [more]
I1LQD5_SOYBN2.1e-13487.08Uncharacterized protein OS=Glycine max GN=GLYMA_12G051500 PE=4 SV=1[more]
BLAST of Cla007016 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120143|ref|XP_008460036.1|9.4e-15298.89PREDICTED: rhomboid protein 2 [Cucumis melo][more]
gi|778711412|ref|XP_011656727.1|2.7e-15198.52PREDICTED: rhomboid protein 2 [Cucumis sativus][more]
gi|1009139133|ref|XP_015886960.1|1.7e-13788.19PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba][more]
gi|703118467|ref|XP_010101608.1|1.5e-13687.45Rhomboid domain-containing protein 1 [Morus notabilis][more]
gi|802554988|ref|XP_012065193.1|1.8e-13487.41PREDICTED: rhomboid protein 2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU40972watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007016Cla007016.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU40972WMU40972transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 13..199
score: 1.9
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 48..201
score: 8.5
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..261
score: 8.7
NoneNo IPR availablePANTHERPTHR12917:SF21RHOMBOID PROTEIN 2coord: 1..261
score: 8.7
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 13..199
score: 1.22