Lsi09G018470 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi09G018470
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRhomboid protein
Locationchr09 : 27315609 .. 27316678 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCATTACACTCTTGTTCTGGTCATACTCTCTGGTGTTCTAGTGTTGGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTGGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCGAAATTGGACCTTTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCGCTGATCTTTACTTCCATTATTGTCCCACAGGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTCTGGGCATTTTCCATGCTTGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACGGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCAGATGAATGCATTGCCATCTGGAGATGTAGAGATTGTATGAATTTTTAGGAGTCATTTGCATAGTTAAGATGTTGAAATTGACAGTCTGCTATCCAGTGAAATCCTGTTGTTTCTGCCAAAGATATATTTGGTCTTTGCGATGCCCTCATGTTGCAGATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGGTGACAGGATTACTGGTGTGCAATTCTTCCATTCATTGAGATTGAACTGCACAGGAGATATCAGCTGTATGGAAGATGGTCCAGCCAAGAAGTAA

mRNA sequence

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCATTACACTCTTGTTCTGGTCATACTCTCTGGTGTTCTAGTGTTGGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTGGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCGAAATTGGACCTTTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCGCTGATCTTTACTTCCATTATTGTCCCACAGGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTCTGGGCATTTTCCATGCTTGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACGGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCAGATGAATGCATTGCCATCTGGAGATGTAGAGATTATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGGTGACAGGATTACTGGTGTGCAATTCTTCCATTCATTGAGATTGAACTGCACAGGAGATATCAGCTGTATGGAAGATGGTCCAGCCAAGAAGTAA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCATTACACTCTTGTTCTGGTCATACTCTCTGGTGTTCTAGTGTTGGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTGGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCGAAATTGGACCTTTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCGCTGATCTTTACTTCCATTATTGTCCCACAGGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTCTGGGCATTTTCCATGCTTGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACGGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCAGATGAATGCATTGCCATCTGGAGATGTAGAGATTATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGGTGACAGGATTACTGGTGTGCAATTCTTCCATTCATTGAGATTGAACTGCACAGGAGATATCAGCTGTATGGAAGATGGTCCAGCCAAGAAGTAA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTDPSLPSVRFLSSGNGRTLQMNALPSGDVEIIWSSYQGFLLFLILGDRITGVQFFHSLRLNCTGDISCMEDGPAKK
BLAST of Lsi09G018470 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.8e-123
Identity = 214/271 (78.97%), Postives = 246/271 (90.77%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           D SLPSVRF+  GNGRTLQ +A+P   VE++
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

BLAST of Lsi09G018470 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 1

Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L A+ Q       +   L   +   +  G++ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   V  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 190

Query: 189 GIIVGY 194
           G ++GY
Sbjct: 193 GAVMGY 190

BLAST of Lsi09G018470 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.1e-08
Identity = 53/176 (30.11%), Postives = 84/176 (47.73%), Query Frame = 1

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           IWF++  +   YS   LS E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  IWFFLNPQKPLYSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVL 158

Query: 145 LSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+   +  P  SF GHL+GI+VG     G
Sbjct: 159 NNHYCPGGFVNILGF-PVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQG 208

BLAST of Lsi09G018470 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 1

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           +WF++      Y H  +S E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  VWFFLNPWKPLY-HSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVL 158

Query: 145 LSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+      P  SF GHL+GI+VG     G
Sbjct: 159 SNHYCPGGFVNILGF-PVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQG 208

BLAST of Lsi09G018470 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.3e-07
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 1

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

BLAST of Lsi09G018470 vs. TrEMBL
Match: E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 5.5e-150
Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFLSSGNGRTLQMNALP+GDVEI+
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Lsi09G018470 vs. TrEMBL
Match: A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.6e-149
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFLSSGNGRTLQMNALP+GDVEI+
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Lsi09G018470 vs. TrEMBL
Match: W9RRH2_9ROSA (Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.5e-134
Identity = 236/271 (87.08%), Postives = 258/271 (95.20%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLP+VRFL+SGNGRTLQM++LP    EI+
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

BLAST of Lsi09G018470 vs. TrEMBL
Match: A0A0B2QUU3_GLYSO (Rhomboid domain-containing protein 1 OS=Glycine soja GN=glysoja_010217 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.3e-132
Identity = 235/271 (86.72%), Postives = 256/271 (94.46%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC  IWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLGV YYL YTLVLV+LSGVLVL MYHLLIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAIAWGLIHGM+N+WA S+LGW+ LVF+ SLK+S   + +FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFL+S +GRTLQM+ALP+G+VEI+
Sbjct: 241 DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271

BLAST of Lsi09G018470 vs. TrEMBL
Match: I1LQD5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G051500 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.3e-132
Identity = 235/271 (86.72%), Postives = 256/271 (94.46%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC  IWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLGV YYL YTLVLV+LSGVLVL MYHLLIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAIAWGLIHGM+N+WA S+LGW+ LVF+ SLK+S   + +FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFL+S +GRTLQM+ALP+G+VEI+
Sbjct: 241 DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271

BLAST of Lsi09G018470 vs. TAIR10
Match: AT3G59520.1 (AT3G59520.1 RHOMBOID-like protein 13)

HSP 1 Score: 442.2 bits (1136), Expect = 2.7e-124
Identity = 214/271 (78.97%), Postives = 246/271 (90.77%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           D SLPSVRF+  GNGRTLQ +A+P   VE++
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

BLAST of Lsi09G018470 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-08
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 1

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

BLAST of Lsi09G018470 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 7.8e-150
Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFLSSGNGRTLQMNALP+GDVEI+
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Lsi09G018470 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 2.3e-149
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFLSSGNGRTLQMNALP+GDVEI+
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Lsi09G018470 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 489.6 bits (1259), Expect = 4.2e-135
Identity = 238/271 (87.82%), Postives = 258/271 (95.20%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATS IIGICCAIWFYIQKK+IGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSCIIGICCAIWFYIQKKHIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LGH+GLGV YYL Y+LV+V+LSGVLVLGMYH+LIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+ +VFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLPSVRFL SGNGRTLQM+ALP    E++
Sbjct: 241 DPSLPSVRFLGSGNGRTLQMSALPVAGTELV 271

BLAST of Lsi09G018470 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 486.5 bits (1251), Expect = 3.5e-134
Identity = 236/271 (87.08%), Postives = 258/271 (95.20%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEII 272
           DPSLP+VRFL+SGNGRTLQM++LP    EI+
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

BLAST of Lsi09G018470 vs. NCBI nr
Match: gi|802554988|ref|XP_012065193.1| (PREDICTED: rhomboid protein 2 [Jatropha curcas])

HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132
Identity = 236/270 (87.41%), Postives = 258/270 (95.56%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLG+ YYLHYTLVLV+LSG+LVLGMYH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGIVEQLGHMGLGMAYYLHYTLVLVVLSGLLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+V++F+FSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWIVVIFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPSGDVEI 271
           DPSLPSVRFL  G+GRTLQM+ALP   VE+
Sbjct: 241 DPSLPSVRFL--GSGRTLQMSALPLEGVEV 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RBL13_ARATH4.8e-12378.97RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1[more]
RBD2_SCHPO1.6e-0928.49Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd... [more]
RHBL4_HUMAN5.1e-0830.11Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1[more]
RHBL4_MOUSE1.9e-0728.98Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1[more]
RBL14_ARATH3.3e-0733.33Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV... [more]
Match NameE-valueIdentityDescription
E5GC88_CUCME5.5e-15098.89Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K961_CUCSA1.6e-14998.52Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1[more]
W9RRH2_9ROSA2.5e-13487.08Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1[more]
A0A0B2QUU3_GLYSO2.3e-13286.72Rhomboid domain-containing protein 1 OS=Glycine soja GN=glysoja_010217 PE=4 SV=1[more]
I1LQD5_SOYBN2.3e-13286.72Uncharacterized protein OS=Glycine max GN=GLYMA_12G051500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G59520.12.7e-12478.97 RHOMBOID-like protein 13[more]
AT3G17611.11.9e-0833.33 RHOMBOID-like protein 14[more]
Match NameE-valueIdentityDescription
gi|659120143|ref|XP_008460036.1|7.8e-15098.89PREDICTED: rhomboid protein 2 [Cucumis melo][more]
gi|778711412|ref|XP_011656727.1|2.3e-14998.52PREDICTED: rhomboid protein 2 [Cucumis sativus][more]
gi|1009139133|ref|XP_015886960.1|4.2e-13587.82PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba][more]
gi|703118467|ref|XP_010101608.1|3.5e-13487.08Rhomboid domain-containing protein 1 [Morus notabilis][more]
gi|802554988|ref|XP_012065193.1|2.5e-13287.41PREDICTED: rhomboid protein 2 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G018470.1Lsi09G018470.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 13..199
score: 8.6
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 48..201
score: 1.9
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..261
score: 2.7
NoneNo IPR availablePANTHERPTHR12917:SF21RHOMBOID PROTEIN 2coord: 1..261
score: 2.7
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 13..199
score: 1.44