ClCG06G000950 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G000950
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRhomboid protein
LocationCG_Chr06 : 900059 .. 901127 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGGTAGAACCTTGCACATGAATGCACTGCCAACTGGAGATGTAGAGATTGTATGAATTTTCAGGAGTCATTTGCATACTTAAGATGTTGAAATTTACAGTCTGCTATCCAGTGAAATCCTGTTGTTTCTGCCAAAGATATATTTGGTCTTTGAGATGCCCTCATGTTGGAGATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGTGACAGGATTGCTGGTTTGCAATTCTTCCATTCATTGGGATTGAACTGCACAAGAAATATTAGCTGTATGGCAGACGGTCCAGCCAAGAAGTAA

mRNA sequence

ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGTCTGCTATCCAGTGAAATCCTGTTGTTTCTGCCAAAGATATATTTGGTCTTTGAGATGCCCTCATGTTGGAGATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGTGACAGGATTGCTGGTTTGCAATTCTTCCATTCATTGGGATTGAACTGCACAAGAAATATTAGCTGTATGGCAGACGGTCCAGCCAAGAAGTAA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTCTATGAGATTCTAGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTCTACATCCAGAAGAAAAACATTGGATATTCACATGTGGGGTTGAGTTATGAAACTGCCATGGAAGGGCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATCAGTGTTATTCATCTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTTGGGCATATTGGCTTAGGTGTTCCTTATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCGGGTGTGCTAGTGTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTTGAATACTTTCGACGAGTTACAGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAAGCAACCGTCTTCGAAGTTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGAATGAATAACTTTTGGGCATTTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACAACTTCGATTTTCTGGAGATTGAATCTGTAACAGACCCTTCGTTGCCGTCTGTTCGATTTCTTTCATCTGGAAACGTCTGCTATCCAGTGAAATCCTGTTGTTTCTGCCAAAGATATATTTGGTCTTTGAGATGCCCTCATGTTGGAGATCTGGTCAAGCTATCAGGGTTTTCTCTTGTTCCTCATTTTGGTGACAGGATTGCTGGTTTGCAATTCTTCCATTCATTGGGATTGAACTGCACAAGAAATATTAGCTGTATGGCAGACGGTCCAGCCAAGAAGTAA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTDPSLPSVRFLSSGNVCYPVKSCCFCQRYIWSLRCPHVGDLVKLSGFSLVPHFGDRIAGLQFFHSLGLNCTRNISCMADGPAKK
Homology
[Close]
BLAST of ClCG06G000950 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 7.8e-121
Identity = 205/253 (81.03%), Postives = 231/253 (91.30%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSG 254
           D SLPSVRF+ +G
Sbjct: 241 DASLPSVRFIGNG 253

[Close]
BLAST of ClCG06G000950 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-11
Identity = 53/186 (28.49%), Postives = 88/186 (47.31%), Query Frame = 1 

Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L A+ Q       +   L   +   +  G++ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   V  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 190

Query: 189 GIIVGY 194
           G ++GY
Sbjct: 193 GAVMGY 190

[Close]
BLAST of ClCG06G000950 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           IWF++  +   YS   LS E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  IWFFLNPQKPLYSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVL 158

Query: 145 LSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+   +  P  SF GHL+GI+VG     G
Sbjct: 159 NNHYCPGGFVNILGF-PVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of ClCG06G000950 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-10
Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           +WF++      Y H  +S E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  VWFFLNPWKPLY-HSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVL 158

Query: 145 LSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+      P  SF GHL+GI+VG     G
Sbjct: 159 SNHYCPGGFVNILGF-PVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of ClCG06G000950 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-10
Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 1 

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]
BLAST of ClCG06G000950 vs. TrEMBL
Match: E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.5e-142
Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLPSVRFLSSGN
Sbjct: 241 DPSLPSVRFLSSGN 254

[Close]
BLAST of ClCG06G000950 vs. TrEMBL
Match: A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 4.3e-142
Identity = 251/254 (98.82%), Postives = 253/254 (99.61%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLPSVRFLSSGN
Sbjct: 241 DPSLPSVRFLSSGN 254

[Close]
BLAST of ClCG06G000950 vs. TrEMBL
Match: W9RRH2_9ROSA (Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 7.6e-131
Identity = 227/254 (89.37%), Postives = 245/254 (96.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLP+VRFL+SGN
Sbjct: 241 DPSLPAVRFLASGN 254

[Close]
BLAST of ClCG06G000950 vs. TrEMBL
Match: B9HH36_POPTR (Rhomboid family protein OS=Populus trichocarpa GN=POPTR_0007s01800g PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 8.4e-130
Identity = 227/253 (89.72%), Postives = 240/253 (94.86%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEI+EKPATS IIGIC AIWFYIQK+N GYSHVGLSYE A+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEIVEKPATSCIIGICSAIWFYIQKRNFGYSHVGLSYENAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGHIGLGV YYLH+TLVLV+LSG LVLGMYHLLIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHIGLGVAYYLHHTLVLVVLSGALVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFR VTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRSVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAIAWGLIHGMNN+WA SMLGW+VLVF+ SLK+S  Y+FDFLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAIAWGLIHGMNNYWAISMLGWIVLVFVVSLKRSGAYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSG 254
           DPSLPSVRFL SG
Sbjct: 241 DPSLPSVRFLGSG 253

[Close]
BLAST of ClCG06G000950 vs. TrEMBL
Match: V4TWZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021679mg PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 7.1e-129
Identity = 224/253 (88.54%), Postives = 242/253 (95.65%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEI+EKPATS IIGIC  IWFYIQKKNIGYSHVGLSYETA++GHHWRIITSAFS
Sbjct: 1   MGRPLFYEIMEKPATSCIIGICSVIWFYIQKKNIGYSHVGLSYETAVDGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLG +GLG  YYL YTLVLV+LSG+LVLG+YHLLIQ+FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGDVGLGTAYYLQYTLVLVVLSGLLVLGIYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNN+WA SMLGW+VLVF++SLK+S TY+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNYWALSMLGWIVLVFVYSLKRSGTYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSG 254
           DPSLPSVRF+ +G
Sbjct: 241 DPSLPSVRFIGNG 253

[Close]
BLAST of ClCG06G000950 vs. TAIR10
Match: AT3G59520.1 (AT3G59520.1 RHOMBOID-like protein 13)

HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-122
Identity = 205/253 (81.03%), Postives = 231/253 (91.30%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSG 254
           D SLPSVRF+ +G
Sbjct: 241 DASLPSVRFIGNG 253

[Close]
BLAST of ClCG06G000950 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14)

HSP 1 Score: 66.2 bits (160), Expect = 4.1e-11
Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 1 

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]
BLAST of ClCG06G000950 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 513.8 bits (1322), Expect = 2.1e-142
Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLPSVRFLSSGN
Sbjct: 241 DPSLPSVRFLSSGN 254

[Close]
BLAST of ClCG06G000950 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 6.2e-142
Identity = 251/254 (98.82%), Postives = 253/254 (99.61%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLPSVRFLSSGN
Sbjct: 241 DPSLPSVRFLSSGN 254

[Close]
BLAST of ClCG06G000950 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 477.6 bits (1228), Expect = 1.7e-131
Identity = 229/254 (90.16%), Postives = 245/254 (96.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATS IIGICCAIWFYIQKK+IGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSCIIGICCAIWFYIQKKHIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LGH+GLGV YYL Y+LV+V+LSGVLVLGMYH+LIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+ +VFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLPSVRFL SGN
Sbjct: 241 DPSLPSVRFLGSGN 254

[Close]
BLAST of ClCG06G000950 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 227/254 (89.37%), Postives = 245/254 (96.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGN 255
           DPSLP+VRFL+SGN
Sbjct: 241 DPSLPAVRFLASGN 254

[Close]
BLAST of ClCG06G000950 vs. NCBI nr
Match: gi|802554988|ref|XP_012065193.1| (PREDICTED: rhomboid protein 2 [Jatropha curcas])

HSP 1 Score: 474.6 bits (1220), Expect = 1.4e-130
Identity = 227/253 (89.72%), Postives = 245/253 (96.84%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLG+ YYLHYTLVLV+LSG+LVLGMYH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGIVEQLGHMGLGMAYYLHYTLVLVVLSGLLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+V++F+FSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWIVVIFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSG 254
           DPSLPSVRFL SG
Sbjct: 241 DPSLPSVRFLGSG 253

The following BLAST results are available for this feature:
BLAST of ClCG06G000950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL13_ARATH7.8e-12181.03RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1[more]
RBD2_SCHPO1.7e-1128.49Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd... [more]
RHBL4_HUMAN1.1e-1030.11Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1[more]
RHBL4_MOUSE4.3e-1028.98Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1[more]
RBL14_ARATH7.3e-1033.33Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV... [more]
BLAST of ClCG06G000950 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GC88_CUCME1.5e-14299.21Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K961_CUCSA4.3e-14298.82Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1[more]
W9RRH2_9ROSA7.6e-13189.37Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1[more]
B9HH36_POPTR8.4e-13089.72Rhomboid family protein OS=Populus trichocarpa GN=POPTR_0007s01800g PE=4 SV=1[more]
V4TWZ0_9ROSI7.1e-12988.54Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021679mg PE=4 SV=1[more]
BLAST of ClCG06G000950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59520.14.4e-12281.03 RHOMBOID-like protein 13[more]
AT3G17611.14.1e-1133.33 RHOMBOID-like protein 14[more]
BLAST of ClCG06G000950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120143|ref|XP_008460036.1|2.1e-14299.21PREDICTED: rhomboid protein 2 [Cucumis melo][more]
gi|778711412|ref|XP_011656727.1|6.2e-14298.82PREDICTED: rhomboid protein 2 [Cucumis sativus][more]
gi|1009139133|ref|XP_015886960.1|1.7e-13190.16PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba][more]
gi|703118467|ref|XP_010101608.1|1.1e-13089.37Rhomboid domain-containing protein 1 [Morus notabilis][more]
gi|802554988|ref|XP_012065193.1|1.4e-13089.72PREDICTED: rhomboid protein 2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G000950.1ClCG06G000950.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 13..199
score: 1.0
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 48..201
score: 1.5
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..255
score: 3.1
NoneNo IPR availablePANTHERPTHR12917:SF21RHOMBOID PROTEIN 2coord: 1..255
score: 3.1
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 13..199
score: 2.35