CsaV3_6G006800 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G006800
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Rhomboid protein
Location	chr6 : 5559544 .. 5561655 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAAGAAGAAAAGGGATGGGAAGGGTGAAAGAAGTGAAATTTGAAAGTAAGAAATATAAAGAATAAAAAGATGCAATGGAATTGGGATGGTCTCAAGTAAGTAAGCCAATTGATTCGAGTACCTTCACCAACATGCGTGACCTTTCAAGTAAGAAAAATTCCCATCTGATTTTCAAACCCTAATTTTCAACTTCTTCACCATTCACACTCAAATCTGAATCTTTGCATTTACCTATCAGGCTTTCATCTGTCGCAGATTTGAATTCAATTGCTTCTCAAAGATACCAACTTTCTAGATTGCACCCTTTCGTTCGTTGGATATTGTTCTGTTTTGGTTTTTTATCGTTTTGTTCTCGATCTGGGTGTCTTTGAGTTTATTGGTTCCGATATAGGGCTTGGATGAAGAAATCGTGATATTGGGGGAAATTGTTTGATCTGAATACACTGTAAGGAGTTACTTAATGACTAGTGCCAAATTGTTCTTCATTTTTTTTATTCTGATGGAATGATTTATAGTCTGTATATGAGCAGTATTGATTTAGGCATTGTGTAAAAGAGGAAGTTTTGAAGGGCAATTTTCAGATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAGACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGAATTTTTAGGGGAGCTGTTTGCATACTTAAGATGTTGAAATTGATAATCTGCTATCCAGTGAAATGGTCTTTGAGATGCTCTCATGCTGGAAATGATCTGGTCAAGCTATCAGGGGTTTTCTCTTGTTCCTGATGTTGGTGACAAGATTACTGGTGTGCAATATTACCGTTCATTAGCATTGAACTGCACAGGAGATATCAGCTGTAAGGAAGATGGTTCAGCCAAGAAGTAATGCTTAAATGGATTTGTCCAATCGCATTTGTACCATAGAGGCTCAAATATCATCTCTGCTGATATATTTTTTCTCCTTTTCCTTGAAGTTTAGTCAAGTGTTTTGTGGATTATTGTTTAACATTTGAAGGCACTGCCTACCACCAACAAACTCCCAAATTTAGAGTTTGTGATGATCTTTAAGAGTAAAGCTTTTAATTGAATTGTTTCGTTAACAAGTGTTTTTAGTTTCTTTGAAGGTATTAGTGTTTTCAAGATTTCCAAATGTATCTCTAGTCATGATAAATTTGAGGTTGAATTATTATGCCCATTTCTGATCGACATATAGTCAGTTAGAGCTTGAATTTTGATTTCAAACTCGCACAGGAAAAGAAAAATAATATAGTTTCATATTTCTTAATCCTTTCAAAAGTGCAAAAGGGATAGGAAAGCCATATCCCTCGTTCCAATAACTTTTGTACATTCTATCTTTGTGACCAC

mRNA sequence

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAGACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAGACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVTDPSLPSVRFLSSGNGRTLQMNALPTGDVEIV

Homology

[Close]

BLAST of CsaV3_6G006800 vs. NCBI nr
Match: XP_011656727.1 (PREDICTED: rhomboid protein 2 [Cucumis sativus] >KGN46305.1 hypothetical protein Csa_6G081460 [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 9.1e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. NCBI nr
Match: XP_008460036.1 (PREDICTED: RHOMBOID-like protein 13 [Cucumis melo] >ADN34087.1 rhomboid protein [Cucumis melo subsp. melo])

HSP 1 Score: 541.2 bits (1393), Expect = 2.0e-150
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. NCBI nr
Match: XP_022954125.1 (RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954126.1 RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954127.1 RHOMBOID-like protein 13 [Cucurbita moschata] >XP_023520866.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.2 bits (1354), Expect = 6.7e-146
Identity = 259/271 (95.57%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. NCBI nr
Match: XP_023520865.1 (RHOMBOID-like protein 13 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.2 bits (1354), Expect = 6.7e-146
Identity = 259/271 (95.57%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 14  MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 73

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 74  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 133

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 134 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 193

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 194 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 253

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 254 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 284

[Close]

BLAST of CsaV3_6G006800 vs. NCBI nr
Match: XP_022992352.1 (RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992353.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992354.1 RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima])

HSP 1 Score: 525.0 bits (1351), Expect = 1.5e-145
Identity = 258/271 (95.20%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MG+PLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. TAIR10
Match: AT3G59520.1 (RHOMBOID-like protein 13)

HSP 1 Score: 445.3 bits (1144), Expect = 2.7e-125
Identity = 215/271 (79.34%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA++MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]

BLAST of CsaV3_6G006800 vs. TAIR10
Match: AT3G58460.2 (RHOMBOID-like protein 15)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 48/175 (27.43%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 52  WRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
           +R  T+   H S++H++FNM AL  +G+  +L  I +G    L+ T++L   + VL    
Sbjct: 88  YRFYTAIIFHGSLLHVLFNMMALVPMGS--ELERI-MGSVRLLYLTVLLATTNAVL---- 147

Query: 112 YHLLIQK-------FKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISF 171
            HLLI         ++ ++     A+G+S ++F  + I +     +   +FG  ++P   
Sbjct: 148 -HLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKL 207

Query: 172 APFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH----GMNNFWAISMLGWV 216
            P+  LI   +++   S LGHL GI+ G++ ++GL +    G + F  I    W+
Sbjct: 208 YPWILLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWM 254

[Close]

BLAST of CsaV3_6G006800 vs. TAIR10
Match: AT3G17611.1 (RHOMBOID-like protein 14)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 53  RIITSAFSHISVIHLVFN-MSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+N MS LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]

BLAST of CsaV3_6G006800 vs. Swiss-Prot
Match: sp|Q9M1B5|RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RBL13 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.9e-124
Identity = 215/271 (79.34%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA++MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]

BLAST of CsaV3_6G006800 vs. Swiss-Prot
Match: sp|O74926|RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rbd2 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 6.9e-09
Identity = 63/228 (27.63%), Postives = 105/228 (46.05%), Query Frame = 0


Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L A+ Q       +   L   +   +  G++ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   V  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 192

Query: 189 GIIVGYAIAWGLIHGMNNFWAISMLGWVVLVF-IFSLKKSNTYNFDFL 235
           G ++GY   + L        +I +  W   V  IF     N ++FD L
Sbjct: 193 GAVMGYCTPFML-------GSIPLKSWAQNVDPIFQSWVKNYHSFDQL 225

[Close]

BLAST of CsaV3_6G006800 vs. Swiss-Prot
Match: sp|Q8LB17|RBL15_ARATH (Rhomboid-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=RBL15 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-08
Identity = 48/175 (27.43%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 52  WRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
           +R  T+   H S++H++FNM AL  +G+  +L  I +G    L+ T++L   + VL    
Sbjct: 65  YRFYTAIIFHGSLLHVLFNMMALVPMGS--ELERI-MGSVRLLYLTVLLATTNAVL---- 124

Query: 112 YHLLIQK-------FKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISF 171
            HLLI         ++ ++     A+G+S ++F  + I +     +   +FG  ++P   
Sbjct: 125 -HLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKL 184

Query: 172 APFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH----GMNNFWAISMLGWV 216
            P+  LI   +++   S LGHL GI+ G++ ++GL +    G + F  I    W+
Sbjct: 185 YPWILLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWM 231

[Close]

BLAST of CsaV3_6G006800 vs. Swiss-Prot
Match: sp|Q8RXW0|RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 53  RIITSAFSHISVIHLVFN-MSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+N MS LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]

BLAST of CsaV3_6G006800 vs. Swiss-Prot
Match: sp|Q6FSG0|RBD2_CANGA (Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RBD2 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.3e-06
Identity = 48/145 (33.10%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           H+S +HLVFN  AL  +G +           +   +T V++ LS V+   +Y ++ +   
Sbjct: 65  HLSYLHLVFN--ALAIVGPLNNFES-----SHGTIHTGVVLNLSAVIAGIIYCVVSRLLS 124

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPS--SKLDLFGFL-----SLPISFAPFESLIFT 180
           LE        G S  VF ++T L V++     +L+L  F+     S+P  F P   L+FT
Sbjct: 125 LE----TGVAGASGWVFTFITYLCVKESQLYPRLELSRFIPGVTQSIPTQFTPVVFLLFT 184

Query: 181 SIIVPQASFLGHLSGIIVGYAIAWG 199
           +I+  Q+SFLGH +G+IVGY + +G
Sbjct: 185 AIVFFQSSFLGHTAGMIVGYIMGYG 198

[Close]

BLAST of CsaV3_6G006800 vs. TrEMBL
Match: tr|A0A0A0K961|A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 6.0e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. TrEMBL
Match: tr|A0A1S3CB49|A0A1S3CB49_CUCME (RHOMBOID-like protein 13 OS=Cucumis melo OX=3656 GN=LOC103498973 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. TrEMBL
Match: tr|E5GC88|E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. TrEMBL
Match: tr|A0A2P5G0N0|A0A2P5G0N0_9ROSA (Peptidase S54, rhomboid domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_008230 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 5.5e-136
Identity = 241/271 (88.93%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLVYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS+IHLVFNMSALWSLG VE+LG +GLGV YYLHYTLVL +LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISIIHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLAVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGW++LVF+FSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIILVFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL+SGNGRTLQM+ LP    EIV
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSTLPVSGAEIV 271

[Close]

BLAST of CsaV3_6G006800 vs. TrEMBL
Match: tr|A0A2P5CSG8|A0A2P5CSG8_PARAD (Peptidase S54, rhomboid domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127290 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 7.1e-136
Identity = 241/271 (88.93%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLVYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS+IHLVFNMSALWSLG VE+LG +GLGV YYLHYTLVL +LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISIIHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLAVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGW++LVF+FSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIILVFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL+SGNGRTLQM+ LP    EIV
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSTLPVSAAEIV 271

The following BLAST results are available for this feature:

BLAST of CsaV3_6G006800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656727.1	9.1e-151	100.00	PREDICTED: rhomboid protein 2 [Cucumis sativus] >KGN46305.1 hypothetical protein...	[more]
XP_008460036.1	2.0e-150	99.63	PREDICTED: RHOMBOID-like protein 13 [Cucumis melo] >ADN34087.1 rhomboid protein ...	[more]
XP_022954125.1	6.7e-146	95.57	RHOMBOID-like protein 13 [Cucurbita moschata] >XP_022954126.1 RHOMBOID-like prot...	[more]
XP_023520865.1	6.7e-146	95.57	RHOMBOID-like protein 13 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022992352.1	1.5e-145	95.20	RHOMBOID-like protein 13 isoform X2 [Cucurbita maxima] >XP_022992353.1 RHOMBOID-...	[more]

BLAST of CsaV3_6G006800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59520.1	2.7e-125	79.34	RHOMBOID-like protein 13	[more]
AT3G58460.2	2.5e-09	27.43	RHOMBOID-like protein 15	[more]
AT3G17611.1	1.6e-08	33.33	RHOMBOID-like protein 14	[more]

BLAST of CsaV3_6G006800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M1B5\|RBL13_ARATH	4.9e-124	79.34	RHOMBOID-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RBL13 PE=3 SV=1	[more]
sp\|O74926\|RBD2_SCHPO	6.9e-09	27.63	Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284...	[more]
sp\|Q8LB17\|RBL15_ARATH	4.5e-08	27.43	Rhomboid-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=RBL15 PE=1 SV=2	[more]
sp\|Q8RXW0\|RBL14_ARATH	2.9e-07	33.33	Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14...	[more]
sp\|Q6FSG0\|RBD2_CANGA	9.3e-06	33.10	Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / ...	[more]

BLAST of CsaV3_6G006800 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K961\|A0A0A0K961_CUCSA	6.0e-151	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081460 PE=4 SV=1	[more]
tr\|A0A1S3CB49\|A0A1S3CB49_CUCME	1.3e-150	99.63	RHOMBOID-like protein 13 OS=Cucumis melo OX=3656 GN=LOC103498973 PE=4 SV=1	[more]
tr\|E5GC88\|E5GC88_CUCME	1.3e-150	99.63	Rhomboid protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A2P5G0N0\|A0A2P5G0N0_9ROSA	5.5e-136	88.93	Peptidase S54, rhomboid domain containing protein OS=Trema orientalis OX=63057 G...	[more]
tr\|A0A2P5CSG8\|A0A2P5CSG8_PARAD	7.1e-136	88.93	Peptidase S54, rhomboid domain containing protein OS=Parasponia andersonii OX=34...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G006800.1	CsaV3_6G006800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	G3DSA:1.20.1540.10		coord: 10..201 e-value: 8.6E-18 score: 66.7
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 48..201 e-value: 5.6E-25 score: 88.0
None	No IPR available	PANTHER	PTHR45186	FAMILY NOT NAMED	coord: 1..271
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 13..199

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G006800	CSPI06G06420	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G006800	Cucsa.362190	Cucumber (Gy14) v1	cgycucB556
CsaV3_6G006800	CmaCh17G006080	Cucurbita maxima (Rimu)	cmacucB0446
CsaV3_6G006800	CmoCh17G005890	Cucurbita moschata (Rifu)	cmocucB0439
CsaV3_6G006800	Cp4.1LG00g02570	Cucurbita pepo (Zucchini)	cpecucB0018
CsaV3_6G006800	CsGy6G006420	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G006800	Carg18906	Silver-seed gourd	carcucB0807
CsaV3_6G006800	Cla007016	Watermelon (97103) v1	cucwmB562
CsaV3_6G006800	MELO3C022444	Melon (DHL92) v3.5.1	cucmeB444
CsaV3_6G006800	ClCG06G000950	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G006800	Lsi09G018470	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G006800	MELO3C022444.2	Melon (DHL92) v3.6.1	cucmedB435
CsaV3_6G006800	Cla97C06G110210	Watermelon (97103) v2	cucwmbB487
CsaV3_6G006800	Bhi12G002214	Wax gourd	cucwgoB568

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G006800	Silver-seed gourd	carcucB0098
CsaV3_6G006800	Cucurbita maxima (Rimu)	cmacucB1077
CsaV3_6G006800	Cucurbita moschata (Rifu)	cmocucB1060
CsaV3_6G006800	Cucurbita pepo (Zucchini)	cpecucB0408
CsaV3_6G006800	Wax gourd	cucwgoB559
CsaV3_6G006800	Wax gourd	cucwgoB561