CSPI06G06420 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G06420
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRhomboid protein
LocationChr6 : 5578390 .. 5580334 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATATAAAGAATAAAAAGATGCAATGGAATTGGGATGGTCTCAAGTAAGTAAGCCAATTGATTCGAGTACCTTCACCAACATGCGTGACCTTTCAAGTAAGAAAAATTCCCATCTGATTTTCAAACCCTAATTTTCAACTTCTTCACCATTCACACTCAAATCTGAATCTTTGCATTTCCCTATCAGGCTTTCCTCTGTCGCAGATTTGAATTCAATTGCTTCTCAAAGATACCAACTTTCTAGATTGCTCCCTTTCGTTCGTTGGATATTGTTCTGTTTTGATTTTTTTATCGTTTTGTTCTCGATCTGGGTGTCTTTGAGTTTATTGGTTCCGATATAGGGCTTGGATGAAGAAATCGTGATATTGGGGGAAATTGTTTGATCTGAATACACTGTAAGGAGTTACTTAATGACTAGTGCCAAATTGTTCTTCATTTTTTTTATTCTGATGGAATGATTTATAGTCTGTATATGAGCAGTATTGATTTAGGCATTGTGTAAAAGAGGAAGTTTTGAAGGGCAATTTTCAGATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAAACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCTATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGAATTTTTAGGAGCTGTTTGCATACTTAAGATGTTGAAATTGATAATCTGCTATCCAGTGAAATGGTCTTTGAGATGCTCTCATGCTGGAAATGATCTGGTCAAGCTATCAGGGGTTTTCTCTTGTTCCTGATGTTGGTGACAAGATTACTGGTGTGCAATATTACCGTTCATTAGCATTGAACTGCACAGGAGATATTAGCTGTAAGGAAGATGGTTCAGCCAAGAAGTAATGCTTAAATGGATTTGTCCAATCGCATTTGTACCATAGAGGCTCAAATATCATCTCTGCTGATATATTTTTTCTCCTTTTCCTTGAAGTTTAGTCAAGTGTTTTGTGGATTATTGTTTAACATTTGAAGGCACTGCCTACCACCAACAAACTCCCAAATTTAGAGTTTGTGATGATCTTTAAGAGTAAAGCTTTTAATTGAATTGTTTCGTTAACAAGTGTTTTTAGTTTCTTTGAAGGTATTAGTGTTTTCAAGATTTCCAAATGTATCTCTAGTCATGATAAATTTCAGGTTGAATTATTATGCCCATTTCTGATTGACATATAGTCAGTTAGAGCTTGAATTTTGATTTCAAACTCGCACAGG

mRNA sequence

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAAACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCTATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTTTATGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATCCAGAAGAAAAACATTGGGTATTCGCATGTGGGGTTGAGTTATGAAACTGCCGTGGAAGGTCACCATTGGAGGATAATAACTTCAGCCTTTTCCCATATTAGTGTTATTCATCTGGTTTTTAACATGAGTGCTCTTTGGAGTCTTGGGGCTGTAGAACAGCTGGGGCATATTGGCTTGGGTGTTCCTTATTATCTCCACTACACTCTTGTTTTGGTCATACTCTCTGGTGTGCTAGTTTTAGGAATGTACCATCTCTTGATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTGGTTTTCGGGTGGATGACTATACTTTCTGTGAGGCAACCGTCTTCTAAATTGGACCTCTTTGGCTTCCTTTCGCTACCCATCAGTTTTGCACCATTTGAATCACTGATCTTTACTTCTATTATTGTACCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCATGGGATGAATAACTTCTGGGCCATTTCCATGTTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACGTACAACTTCGATTTTCTGGAGATTGAATCCGTAACAGACCCTTCCTTGCCGTCTGTTCGATTTCTTTCATCTGGAAATGGTAGAACCTTGCAGATGAACGCATTGCCAACTGGAGATGTAGAGATTGTATGA
Homology
[Close]
BLAST of CSPI06G06420 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.9e-124
Identity = 215/271 (79.34%), Postives = 247/271 (91.14%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA++MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]
BLAST of CSPI06G06420 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 6.8e-09
Identity = 63/228 (27.63%), Postives = 105/228 (46.05%), Query Frame = 1 

Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L A+ Q       +   L   +   +  G++ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   V  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 192

Query: 189 GIIVGYAIAWGLIHGMNNFWAISMLGWVVLVF-IFSLKKSNTYNFDFL 235
           G ++GY   + L        +I +  W   V  IF     N ++FD L
Sbjct: 193 GAVMGYCTPFML-------GSIPLKSWAQNVDPIFQSWVKNYHSFDQL 225

[Close]
BLAST of CSPI06G06420 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08
Identity = 53/176 (30.11%), Postives = 84/176 (47.73%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAVEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           IWF++  +   YS   LS E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  IWFFLNPQKPLYSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVL 158

Query: 145 LSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+   +  P  SF GHL+GI+VG     G
Sbjct: 159 NNHYCPGGFVNILGF-PVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of CSPI06G06420 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 1 

Query: 25  IWFYIQKKNIGYSHVGLSYETAVEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGAVEQ 84
           +WF++      Y H  +S E   +   W R++ S   H    HL FNM S LW    +E+
Sbjct: 39  VWFFLNPWKPLY-HSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLER 98

Query: 85  LGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+GV+ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVL 158

Query: 145 LSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   +++ GF  +P  FA +  L+      P  SF GHL+GI+VG     G
Sbjct: 159 SNHYCPGGFVNILGF-PVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQG 208

[Close]
BLAST of CSPI06G06420 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 1 

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]
BLAST of CSPI06G06420 vs. TrEMBL
Match: A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 3.3e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of CSPI06G06420 vs. TrEMBL
Match: E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 7.3e-151
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of CSPI06G06420 vs. TrEMBL
Match: W9RRH2_9ROSA (Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.5e-135
Identity = 237/271 (87.45%), Postives = 259/271 (95.57%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA+SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLP+VRFL+SGNGRTLQM++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

[Close]
BLAST of CSPI06G06420 vs. TrEMBL
Match: A5BJP0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.8e-133
Identity = 234/271 (86.35%), Postives = 256/271 (94.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIG+CCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSA S
Sbjct: 1   MGKPLFYEILEKPATSCIIGLCCAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+G+GV +YL YTLVLV+LSG LVLG YH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGSYHVLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWG+IHGM N+WA+SMLGW+VLVF+FSLK+S  Y+F FLEIE VT
Sbjct: 181 SFLGHLSGIIVGYAIAWGVIHGMTNYWAVSMLGWIVLVFVFSLKRSGAYDFSFLEIEPVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL+SGNGRTLQM+ALP G  ++V
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSALPVGGSDLV 271

[Close]
BLAST of CSPI06G06420 vs. TrEMBL
Match: A0A0B2QUU3_GLYSO (Rhomboid domain-containing protein 1 OS=Glycine soja GN=glysoja_010217 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 3.1e-133
Identity = 237/271 (87.45%), Postives = 256/271 (94.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC  IWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+GLGV YYL YTLVLV+LSGVLVL MYHLLIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAIAWGLIHGM+N+WA+S+LGW+ LVF+ SLK+S   + +FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL+S +GRTLQM+ALP G+VEIV
Sbjct: 241 DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271

[Close]
BLAST of CSPI06G06420 vs. TAIR10
Match: AT3G59520.1 (AT3G59520.1 RHOMBOID-like protein 13)

HSP 1 Score: 445.3 bits (1144), Expect = 2.7e-125
Identity = 215/271 (79.34%), Postives = 247/271 (91.14%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYTLVLV+ SGVLV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WA++MLGW+V+VF+FSLKKS  Y+F FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

[Close]
BLAST of CSPI06G06420 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 1 

Query: 53  RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 112
           R+  SAF H++  HLV+NM S LW    ++    +G      + +TL+ +     L+L  
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAK 137

Query: 113 YHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLI 172
             LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI
Sbjct: 138 SLLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELI 197

Query: 173 FTSIIVPQASFLGHLSGIIVG 193
              + VP ASFLGHL GI+ G
Sbjct: 198 LVQMFVPNASFLGHLGGILAG 213

[Close]
BLAST of CSPI06G06420 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 4.7e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of CSPI06G06420 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 541.2 bits (1393), Expect = 1.0e-150
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

[Close]
BLAST of CSPI06G06420 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 493.8 bits (1270), Expect = 1.9e-136
Identity = 239/271 (88.19%), Postives = 259/271 (95.57%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPLFYEILEKPATS IIGICCAIWFYIQKK+IGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSCIIGICCAIWFYIQKKHIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LGH+GLGV YYL Y+LV+V+LSGVLVLGMYH+LIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGW+ +VFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL SGNGRTLQM+ALP    E+V
Sbjct: 241 DPSLPSVRFLGSGNGRTLQMSALPVAGTELV 271

[Close]
BLAST of CSPI06G06420 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 489.6 bits (1259), Expect = 3.6e-135
Identity = 237/271 (87.45%), Postives = 259/271 (95.57%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG VE+LG +GLGV YYLHYTLVLV+LSGVLVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA+SMLGW+VLVFIFSLK+S  Y+F+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLP+VRFL+SGNGRTLQM++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

[Close]
BLAST of CSPI06G06420 vs. NCBI nr
Match: gi|225433926|ref|XP_002268743.1| (PREDICTED: rhomboid protein 2 [Vitis vinifera])

HSP 1 Score: 483.4 bits (1243), Expect = 2.6e-133
Identity = 234/271 (86.35%), Postives = 256/271 (94.46%), Query Frame = 1 

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIG+CCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSA S
Sbjct: 1   MGKPLFYEILEKPATSCIIGLCCAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSALS 60

Query: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG VEQLGH+G+GV +YL YTLVLV+LSG LVLG YH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGSYHVLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILSV+QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWG+IHGM N+WA+SMLGW+VLVF+FSLK+S  Y+F FLEIE VT
Sbjct: 181 SFLGHLSGIIVGYAIAWGVIHGMTNYWAVSMLGWIVLVFVFSLKRSGAYDFSFLEIEPVT 240

Query: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL+SGNGRTLQM+ALP G  ++V
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSALPVGGSDLV 271

The following BLAST results are available for this feature:
BLAST of CSPI06G06420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL13_ARATH4.9e-12479.34RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1[more]
RBD2_SCHPO6.8e-0927.63Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd... [more]
RHBL4_HUMAN4.4e-0830.11Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1[more]
RHBL4_MOUSE1.7e-0728.98Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1[more]
RBL14_ARATH2.9e-0733.33Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV... [more]
BLAST of CSPI06G06420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K961_CUCSA3.3e-151100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1[more]
E5GC88_CUCME7.3e-15199.63Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
W9RRH2_9ROSA2.5e-13587.45Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1[more]
A5BJP0_VITVI1.8e-13386.35Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=... [more]
A0A0B2QUU3_GLYSO3.1e-13387.45Rhomboid domain-containing protein 1 OS=Glycine soja GN=glysoja_010217 PE=4 SV=1[more]
BLAST of CSPI06G06420 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59520.12.7e-12579.34 RHOMBOID-like protein 13[more]
AT3G17611.11.6e-0833.33 RHOMBOID-like protein 14[more]
BLAST of CSPI06G06420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711412|ref|XP_011656727.1|4.7e-151100.00PREDICTED: rhomboid protein 2 [Cucumis sativus][more]
gi|659120143|ref|XP_008460036.1|1.0e-15099.63PREDICTED: rhomboid protein 2 [Cucumis melo][more]
gi|1009139133|ref|XP_015886960.1|1.9e-13688.19PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba][more]
gi|703118467|ref|XP_010101608.1|3.6e-13587.45Rhomboid domain-containing protein 1 [Morus notabilis][more]
gi|225433926|ref|XP_002268743.1|2.6e-13386.35PREDICTED: rhomboid protein 2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G06420.1CSPI06G06420.1mRNA
CSPI06G06420.2CSPI06G06420.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 13..199
score: 1.8
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 48..201
score: 1.0
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..261
score: 7.4
NoneNo IPR availablePANTHERPTHR12917:SF21RHOMBOID PROTEIN 2coord: 1..261
score: 7.4
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 13..199
score: 6.8