Cp4.1LG00g02570 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG00g02570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRhomboid protein
LocationCp4.1LG00 : 8212434 .. 8213249 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCTGCCTTTTCTCATATAAGTGTTATTCATTTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCGAAGTTGGAACTCTTTGGCTTTCTTTCGTTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTTTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACAGGAGATGTCGAGATTGTATGA

mRNA sequence

ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCTGCCTTTTCTCATATAAGTGTTATTCATTTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCGAAGTTGGAACTCTTTGGCTTTCTTTCGTTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTTTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACAGGAGATGTCGAGATTGTATGA

Coding sequence (CDS)

ATGGGGAGGCCTTTATTTTACGAGATTCTTGAAAAACCAGCCACAAGTGGGATTATAGGGATTTGCTGTGCTATATGGTTTTACATTCAGAAGAAAAACATTGGATATTCACATGTGGGGCTGAGTTATGAAACTGCCATGGAAGGACACCATTGGAGGATAATAACTTCTGCCTTTTCTCATATAAGTGTTATTCATTTGGTTTTCAACATGAGTGCTCTTTGGAGTCTTGGGGTCTTAGAACAGCTTGGGCATATGGGCTTAGGTGTTGCATATTATCTCCACTACACTCTTGTTCTGGTCATACTCTCTGGTATCCTAGTGTTAGGAATGTACCATCTCTTAATTCAAAAGTTTAAGCTCGAATACTTTCGACGAGTTACCGCTGTTGGATATTCTTGTGTTGTTTTCGGGTGGATGACTATACTTTCTATGAAGCAACCATCTTCGAAGTTGGAACTCTTTGGCTTTCTTTCGTTACCCATCAGCTTTGCACCATTTGAATCACTGATCTTTACTTCCATTATTGTCCCACAAGCAAGTTTTCTTGGACATCTATCTGGAATAATTGTTGGATATGCTATAGCTTGGGGTTTGATCCACGGAATGAATAACTTCTGGGCACTTTCCATGCTAGGATGGGTTGTTCTTGTCTTTATATTTAGCTTGAAGAAATCTAACACCTACGACTTCGACTTTCTGGAGATTGAATCTGTGACGGACCCTTCATTGCCGTCTGTTCGATTTCTTTCAGCTGGAAATGGTAGGACCTTGCAGATGAATGCATTGCCAACAGGAGATGTCGAGATTGTATGA

Protein sequence

MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFSHISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVTDPSLPSVRFLSAGNGRTLQMNALPTGDVEIV
BLAST of Cp4.1LG00g02570 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.9e-124
Identity = 217/271 (80.07%), Postives = 248/271 (91.51%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLGV+EQLGH+GLG AYYLHYTLVLV+ SG+LV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WAL+MLGW+V+VF+FSLKKS  YDF FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

BLAST of Cp4.1LG00g02570 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 5.2e-09
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 1

Query: 9   ILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHH-WRIITSAFSHISVIHL 68
           IL+ P  + II     + + +    I    + LS+   ++    + IIT    H+S++H+
Sbjct: 13  ILKLPIWTQIITYIAILVYALSFFGISTGVLSLSWIGLLQKRQLYEIITYVTLHLSMLHI 72

Query: 69  VFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRV 128
           VFN  +L  L  + Q       +A  L   +   +  GI+ L +YH  ++K   +Y   V
Sbjct: 73  VFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIVYHFFLRK---DY---V 132

Query: 129 TAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLS 188
           +  G S   F +++   +  P   +  F   S+P    P   LI T+I+VP+ASF+GH S
Sbjct: 133 SIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILVPKASFIGHAS 190

Query: 189 GIIVGY 194
           G ++GY
Sbjct: 193 GAVMGY 190

BLAST of Cp4.1LG00g02570 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.8e-08
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 1

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGVLEQ 84
           IWF++  +   YS   LS E   +   W R++ S   H    HL FNM S LW    LE+
Sbjct: 39  IWFFLNPQKPLYSSC-LSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLER 98

Query: 85  LGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+G++ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVL 158

Query: 145 LSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   + + GF  +P  FA +  L+   +  P  SF GHL+GI+VG     G
Sbjct: 159 NNHYCPGGFVNILGF-PVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQG 208

BLAST of Cp4.1LG00g02570 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 1

Query: 53  RIITSAFSHISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMY 112
           R+  SAF H++  HLV+NM +L   G+  +   MG      + +TL+ +     L+L   
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWKGIKLETS-MGSSEFASMVFTLIGMSQGVTLLLAKS 137

Query: 113 HLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIF 172
            LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI 
Sbjct: 138 LLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELIL 197

Query: 173 TSIIVPQASFLGHLSGIIVG 193
             + VP ASFLGHL GI+ G
Sbjct: 198 VQMFVPNASFLGHLGGILAG 213

BLAST of Cp4.1LG00g02570 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-07
Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 1

Query: 25  IWFYIQKKNIGYSHVGLSYETAMEGHHW-RIITSAFSHISVIHLVFNM-SALWSLGVLEQ 84
           +WF++      Y H  +S E   +   W R++ S   H    HL FNM S LW    LE+
Sbjct: 39  VWFFLNPWKPLY-HSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLER 98

Query: 85  LGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTI 144
                LG  ++ +      +L+G++ L +   + +      F+R  AVG+S V+F    +
Sbjct: 99  R----LGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVL 158

Query: 145 LSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 199
            +   P   + + GF  +P  FA +  L+      P  SF GHL+GI+VG     G
Sbjct: 159 SNHYCPGGFVNILGF-PVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQG 208

BLAST of Cp4.1LG00g02570 vs. TrEMBL
Match: E5GC88_CUCME (Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 4.1e-146
Identity = 260/271 (95.94%), Postives = 269/271 (99.26%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Cp4.1LG00g02570 vs. TrEMBL
Match: A0A0A0K961_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 1.2e-145
Identity = 259/271 (95.57%), Postives = 269/271 (99.26%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Cp4.1LG00g02570 vs. TrEMBL
Match: W9RRH2_9ROSA (Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 2.8e-134
Identity = 235/271 (86.72%), Postives = 260/271 (95.94%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLGV+E+LG +GLGV YYLHYTLVLV+LSG+LVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILS+KQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA+SMLGW+VLVFIFSLK+S  YDF+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLP+VRFL++GNGRTLQM++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

BLAST of Cp4.1LG00g02570 vs. TrEMBL
Match: A5BJP0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.3e-133
Identity = 236/271 (87.08%), Postives = 257/271 (94.83%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIG+CCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSA S
Sbjct: 1   MGKPLFYEILEKPATSCIIGLCCAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSALS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLGV+EQLGHMG+GV +YL YTLVLV+LSG LVLG YH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGSYHVLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS+KQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWG+IHGM N+WA+SMLGW+VLVF+FSLK+S  YDF FLEIE VT
Sbjct: 181 SFLGHLSGIIVGYAIAWGVIHGMTNYWAVSMLGWIVLVFVFSLKRSGAYDFSFLEIEPVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL++GNGRTLQM+ALP G  ++V
Sbjct: 241 DPSLPSVRFLASGNGRTLQMSALPVGGSDLV 271

BLAST of Cp4.1LG00g02570 vs. TrEMBL
Match: B9SU27_RICCO (Rhomboid protein, putative OS=Ricinus communis GN=RCOM_0455880 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.2e-133
Identity = 237/271 (87.45%), Postives = 259/271 (95.57%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLGV+EQLGHMGLG+AYYLHYTLVLV+LSG+LVLGMY +LIQ+FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHMGLGIAYYLHYTLVLVVLSGVLVLGMYRILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGY+IAWGLIHGMNNFWA+SMLGW+V++F+FSLK+S  YDF FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYSIAWGLIHGMNNFWAISMLGWIVVIFMFSLKRSGAYDFSFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           D SLPSVRFL  GNGRTLQM+ALP   VE+V
Sbjct: 241 DASLPSVRFL--GNGRTLQMSALPLEGVEVV 269

BLAST of Cp4.1LG00g02570 vs. TAIR10
Match: AT3G59520.1 (AT3G59520.1 RHOMBOID-like protein 13)

HSP 1 Score: 445.3 bits (1144), Expect = 2.7e-125
Identity = 217/271 (80.07%), Postives = 248/271 (91.51%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFY+I+EKPATS I+ +C  IWF IQKK+IGYS VGLSYETA+EGH+WR+ITSA S
Sbjct: 1   MGRPLFYDIIEKPATSCIVTLCSVIWFVIQKKSIGYSQVGLSYETAIEGHYWRMITSALS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISV+HLVFNMSALWSLGV+EQLGH+GLG AYYLHYTLVLV+ SG+LV+G+YHLLI +FK
Sbjct: 61  HISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL LFG LSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYAI+WGLI GMNN+WAL+MLGW+V+VF+FSLKKS  YDF FLEIES+T
Sbjct: 181 SFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           D SLPSVRF+  GNGRTLQ +A+P   VE+V
Sbjct: 241 DASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

BLAST of Cp4.1LG00g02570 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14)

HSP 1 Score: 58.2 bits (139), Expect = 9.4e-09
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 1

Query: 53  RIITSAFSHISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMY 112
           R+  SAF H++  HLV+NM +L   G+  +   MG      + +TL+ +     L+L   
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWKGIKLETS-MGSSEFASMVFTLIGMSQGVTLLLAKS 137

Query: 113 HLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIF 172
            LL+  +   Y+    AVG+S V+F    +L+  Q      ++G L +P  +A +  LI 
Sbjct: 138 LLLLFDYDRAYYNEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELIL 197

Query: 173 TSIIVPQASFLGHLSGIIVG 193
             + VP ASFLGHL GI+ G
Sbjct: 198 VQMFVPNASFLGHLGGILAG 213

BLAST of Cp4.1LG00g02570 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 525.4 bits (1352), Expect = 5.9e-146
Identity = 260/271 (95.94%), Postives = 269/271 (99.26%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Cp4.1LG00g02570 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 523.9 bits (1348), Expect = 1.7e-145
Identity = 259/271 (95.57%), Postives = 269/271 (99.26%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG +EQLGH+GLGV YYLHYTLVLVILSG+LVLGMYHLLIQKFK
Sbjct: 61  HISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS++QPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGWVVLVFIFSLKKSNTY+FDFLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFLS+GNGRTLQMNALPTGDVEIV
Sbjct: 241 DPSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

BLAST of Cp4.1LG00g02570 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 489.2 bits (1258), Expect = 4.7e-135
Identity = 236/271 (87.08%), Postives = 260/271 (95.94%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPLFYEILEKPATS IIGICCAIWFYIQKK+IGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLFYEILEKPATSCIIGICCAIWFYIQKKHIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLG++E+LGH+GLGV YYL Y+LV+V+LSG+LVLGMYH+LIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           LEYFRRVTAVGYSCVVFGWMTILS+KQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGW+ +VFIFSLK+S  YDF+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLPSVRFL +GNGRTLQM+ALP    E+V
Sbjct: 241 DPSLPSVRFLGSGNGRTLQMSALPVAGTELV 271

BLAST of Cp4.1LG00g02570 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 486.1 bits (1250), Expect = 4.0e-134
Identity = 235/271 (86.72%), Postives = 260/271 (95.94%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MGRPL YEILEKPATS IIG+C AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGRPLIYEILEKPATSCIIGLCSAIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HIS++HLVFNMSALWSLGV+E+LG +GLGV YYLHYTLVLV+LSG+LVLGMYHLLIQ+FK
Sbjct: 61  HISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           +EYFRRVTAVGYSCVVFGWMTILS+KQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 IEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGI+VGYA+AWGLIHGMNN+WA+SMLGW+VLVFIFSLK+S  YDF+FLEIESVT
Sbjct: 181 SFLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEIV 272
           DPSLP+VRFL++GNGRTLQM++LP    EIV
Sbjct: 241 DPSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

BLAST of Cp4.1LG00g02570 vs. NCBI nr
Match: gi|802554988|ref|XP_012065193.1| (PREDICTED: rhomboid protein 2 [Jatropha curcas])

HSP 1 Score: 485.3 bits (1248), Expect = 6.8e-134
Identity = 238/270 (88.15%), Postives = 260/270 (96.30%), Query Frame = 1

Query: 1   MGRPLFYEILEKPATSGIIGICCAIWFYIQKKNIGYSHVGLSYETAMEGHHWRIITSAFS 60
           MG+PLFYEILEKPATS IIGIC AIWFYIQKKNIGYSHVGLSYETA+EGHHWRIITSAFS
Sbjct: 1   MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 61  HISVIHLVFNMSALWSLGVLEQLGHMGLGVAYYLHYTLVLVILSGILVLGMYHLLIQKFK 120
           HISVIHLVFNMSALWSLG++EQLGHMGLG+AYYLHYTLVLV+LSG+LVLGMYH+LIQ+FK
Sbjct: 61  HISVIHLVFNMSALWSLGIVEQLGHMGLGMAYYLHYTLVLVVLSGLLVLGMYHILIQRFK 120

Query: 121 LEYFRRVTAVGYSCVVFGWMTILSMKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180
           ++YFRRVTAVGYSCVVFGWMTILS+KQPSSKL LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121 VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWALSMLGWVVLVFIFSLKKSNTYDFDFLEIESVT 240
           SFLGHLSGIIVGYAIAWGLIHGMNNFWA+SMLGW+V++F+FSLK+S  YDF+FLEIESVT
Sbjct: 181 SFLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWIVVIFVFSLKRSGAYDFNFLEIESVT 240

Query: 241 DPSLPSVRFLSAGNGRTLQMNALPTGDVEI 271
           DPSLPSVRFL  G+GRTLQM+ALP   VE+
Sbjct: 241 DPSLPSVRFL--GSGRTLQMSALPLEGVEV 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RBL13_ARATH4.9e-12480.07RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1[more]
RBD2_SCHPO5.2e-0928.49Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd... [more]
RHBL4_HUMAN9.8e-0830.11Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1[more]
RBL14_ARATH1.7e-0733.57Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV... [more]
RHBL4_MOUSE3.7e-0728.98Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
E5GC88_CUCME4.1e-14695.94Rhomboid protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K961_CUCSA1.2e-14595.57Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081460 PE=4 SV=1[more]
W9RRH2_9ROSA2.8e-13486.72Rhomboid domain-containing protein 1 OS=Morus notabilis GN=L484_003607 PE=4 SV=1[more]
A5BJP0_VITVI2.3e-13387.08Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00760 PE=4 SV=... [more]
B9SU27_RICCO5.2e-13387.45Rhomboid protein, putative OS=Ricinus communis GN=RCOM_0455880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G59520.12.7e-12580.07 RHOMBOID-like protein 13[more]
AT3G17611.19.4e-0933.57 RHOMBOID-like protein 14[more]
Match NameE-valueIdentityDescription
gi|659120143|ref|XP_008460036.1|5.9e-14695.94PREDICTED: rhomboid protein 2 [Cucumis melo][more]
gi|778711412|ref|XP_011656727.1|1.7e-14595.57PREDICTED: rhomboid protein 2 [Cucumis sativus][more]
gi|1009139133|ref|XP_015886960.1|4.7e-13587.08PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba][more]
gi|703118467|ref|XP_010101608.1|4.0e-13486.72Rhomboid domain-containing protein 1 [Morus notabilis][more]
gi|802554988|ref|XP_012065193.1|6.8e-13488.15PREDICTED: rhomboid protein 2 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02570.1Cp4.1LG00g02570.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 13..199
score: 3.2
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 48..201
score: 1.1
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..261
score: 4.7
NoneNo IPR availablePANTHERPTHR12917:SF21RHOMBOID PROTEIN 2coord: 1..261
score: 4.7
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 13..199
score: 8.76

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g02570Cucurbita maxima (Rimu)cmacpeB025