WMU40972 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU40972
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr6 : 839710 .. 840400 (-)
Sequence length	690

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTGGATAGCAGACTGTAAATTTCAACATCTTAAGTATGCAAATGACTCCTGAAAATTCATACAATCTCTACATCTCCAGTTGGCAGTGCATTCATGTGCAAGGTTCTACCGTTTCCAGATGAAAGAAATCGAACAGACGGCAACGAAGGGTCTGTTACAGATTCAATCTCCAGAAAATCGAAGTTGTAGGTGTTAGATTTCTTCAAGCTAAATATAAAGACAAGAACAACCCATCCTAACATGGAAAATGCCCAAAAGTTATTCATTCCATGGATCAAACCCCAAGCTATAGCATATCCAACAATTATTCCAGATAGATGTCCAAGAAAACTTGCTTGTGGGACAATAATGGAAGTAAAGATCAGTGATTCAAATGGTGCAAAGCTGATGGGTAGCGAAAGGAAGCCAAAGAGGTCCAACTTCGAAGACGGTTGCTTCACAGAAAGTATAGTCATCCACCCGAAAACCACACAAGAATATCCAACAGCTGTAACTCGTCGAAAGTATTCAAACTTAAACTTTTGAATCAAGAGATGGTACATTCCTAACACTAGCACACCCGAGAGTATGACCAGAACAAGAGTGTAGTGGAGATAATAAGGAACACCTAAGCCAATATGCCCAAGCTGTTCTACAGCCCCAAGACTCCAAAGAGCACTCATGTTGAAAACCAGATGAATAACACTGATA

Library


Library category	ESTs
watermelon fruit 10d library	2
Watermelon normalization and subtraction library	1

Homology

[Close]

BLAST of WMU40972 vs. TAIR10
Match: AT3G59520.1 (AT3G59520.1 RHOMBOID-like protein 13)

HSP 1 Score: 325.5 bits (833), Expect = 2.7e-89
Identity = 159/210 (75.71%), Postives = 176/210 (83.81%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           ISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYT             +YHLLI +FK 
Sbjct: 62  ISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFKI 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           +YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFG LSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 DYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+TD
Sbjct: 182 FLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
            SLPSVRF+  GNGRTL  +A+P   VE+V
Sbjct: 242 ASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

Query: 300  359
           
Sbjct: 302  269

Query: 360  419
           
Sbjct: 362  269

Query: 420  479
           
Sbjct: 422  269

Query: 480  539
           
Sbjct: 482  269

Query: 540  599
           
Sbjct: 542  269

Query: 600  659
           
Sbjct: 602  269

Query: 660  690
           
Sbjct: 662  269

[Close]

BLAST of WMU40972 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-06
Identity = 39/128 (30.47%), Postives = 57/128 (44.53%), Query Frame = -2


Query: 297 HLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKFEYF 356
           HLV+NM S LW    ++    +G      + +T                LL+  +   Y+
Sbjct: 91  HLVYNMMSLLWK--GIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYY 150

Query: 357 RRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLG 416
               AVG+S V+F    +L+  Q      ++G L +P  +A +  LI   + VP ASFLG
Sbjct: 151 NEY-AVGFSGVLFAMKVVLN-SQAEDYSSVYGIL-VPTKYAAWAELILVQMFVPNASFLG 210

Query: 417 HLSGIIVG 476
           HL GI+ G
Sbjct: 211 HLGGILAG 213

Query: 477  536
           
Sbjct: 271  213

Query: 537  596
           
Sbjct: 331  213

Query: 597  656
           
Sbjct: 391  213

Query: 657  678
           
Sbjct: 451  213

[Close]

BLAST of WMU40972 vs. Swiss-Prot
Match: RBL13_ARATH (RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.7e-88
Identity = 159/210 (75.71%), Postives = 176/210 (83.81%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           ISV+HLVFNMSALWSLG VEQLGH+GLG  YYLHYT             +YHLLI +FK 
Sbjct: 62  ISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARFKI 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           +YFRRVTAVGYSCVVFGWMTILSVKQPSSKL+LFG LSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 DYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGI+VGYAI+WGLI GMNN+WA +MLGW+V+VF+FSLKKS  Y+F FLEIES+TD
Sbjct: 182 FLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSGAYDFSFLEIESLTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
            SLPSVRF+  GNGRTL  +A+P   VE+V
Sbjct: 242 ASLPSVRFI--GNGRTLQASAVPLSGVEVV 269

Query: 300  359
           
Sbjct: 302  269

Query: 360  419
           
Sbjct: 362  269

Query: 420  479
           
Sbjct: 422  269

Query: 480  539
           
Sbjct: 482  269

Query: 540  599
           
Sbjct: 542  269

Query: 600  659
           
Sbjct: 602  269

Query: 660  690
           
Sbjct: 662  269

[Close]

BLAST of WMU40972 vs. Swiss-Prot
Match: RBD2_SCHPO (Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd2 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-07
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = -2


Query: 294 ISVIHLVFNMSALWSLGAVEQL----GHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQ 353
           +S++H+VFN  +L  L A+ Q     G +   +   + YT             +YH  ++
Sbjct: 67  LSMLHIVFNFVSL--LPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLI----VYHFFLR 126

Query: 354 KFKFEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIV 413
           K   +Y   V+  G S   F +++   V  P   +  F   S+P    P   LI T+I+V
Sbjct: 127 K---DY---VSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCFPIIYLIMTTILV 186

Query: 414 PQASFLGHLSGIIVGY 473
           P+ASF+GH SG ++GY
Sbjct: 187 PKASFIGHASGAVMGY 190

Query: 474  533
           
Sbjct: 247  190

Query: 534  593
           
Sbjct: 307  190

Query: 594  653
           
Sbjct: 367  190

Query: 654  690
           
Sbjct: 427  190

[Close]

BLAST of WMU40972 vs. Swiss-Prot
Match: RBD2_CANGA (Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RBD2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-06
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = -2


Query: 279 GYSCVVFGWMTILSVKQPS--SKLDLFGFL-----SLPISFAPFESLIFTSIIVPQASFL 338
           G S  VF ++T L VK+     +L+L  F+     S+P  F P   L+FT+I+  Q+SFL
Sbjct: 124 GASGWVFTFITYLCVKESQLYPRLELSRFIPGVTQSIPTQFTPVVFLLFTAIVFFQSSFL 183

Query: 339 GHLSGIIVGYAIAWG 398
           GH +G+IVGY + +G
Sbjct: 184 GHTAGMIVGYIMGYG 198

Query: 399  458
           
Sbjct: 244  198

Query: 459  483
           
Sbjct: 304  198

[Close]

BLAST of WMU40972 vs. NCBI nr
Match: gi|778711412|ref|XP_011656727.1| (PREDICTED: rhomboid protein 2 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 193/210 (91.90%), Postives = 194/210 (92.38%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYT             MYHLLIQKFK 
Sbjct: 62  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKL 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 EYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD
Sbjct: 182 FLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
           PSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 242 PSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

Query: 300  359
           
Sbjct: 302  271

Query: 360  419
           
Sbjct: 362  271

Query: 420  479
           
Sbjct: 422  271

Query: 480  539
           
Sbjct: 482  271

Query: 540  599
           
Sbjct: 542  271

Query: 600  659
           
Sbjct: 602  271

Query: 660  690
           
Sbjct: 662  271

[Close]

BLAST of WMU40972 vs. NCBI nr
Match: gi|659120143|ref|XP_008460036.1| (PREDICTED: rhomboid protein 2 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 193/210 (91.90%), Postives = 194/210 (92.38%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYT             MYHLLIQKFK 
Sbjct: 62  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGMYHLLIQKFKL 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           EYFRRVTAVGYSCVVFGWMTILSV+QPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 EYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD
Sbjct: 182 FLGHLSGIIVGYAIAWGLIHGMNNFWAISMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
           PSLPSVRFLSSGNGRTL MNALPTGDVEIV
Sbjct: 242 PSLPSVRFLSSGNGRTLQMNALPTGDVEIV 271

Query: 300  359
           
Sbjct: 302  271

Query: 360  419
           
Sbjct: 362  271

Query: 420  479
           
Sbjct: 422  271

Query: 480  539
           
Sbjct: 482  271

Query: 540  599
           
Sbjct: 542  271

Query: 600  659
           
Sbjct: 602  271

Query: 660  690
           
Sbjct: 662  271

[Close]

BLAST of WMU40972 vs. NCBI nr
Match: gi|703118467|ref|XP_010101608.1| (Rhomboid domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 342.8 bits (878), Expect = 4.6e-91
Identity = 169/210 (80.48%), Postives = 185/210 (88.10%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           IS++HLVFNMSALWSLG VE+LG +GLGV YYLHYT             MYHLLIQ+FK 
Sbjct: 62  ISILHLVFNMSALWSLGVVEKLGPLGLGVEYYLHYTLVLVVLSGVLVLGMYHLLIQRFKI 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGI+VGYA+AWGLIHGMNN+WA SMLGW+VLVFIFSLK+S  Y+F+FLEIESVTD
Sbjct: 182 FLGHLSGIVVGYAVAWGLIHGMNNYWAVSMLGWIVLVFIFSLKRSGAYDFNFLEIESVTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
           PSLP+VRFL+SGNGRTL M++LP    EIV
Sbjct: 242 PSLPAVRFLASGNGRTLQMSSLPVAGAEIV 271

Query: 300  359
           
Sbjct: 302  271

Query: 360  419
           
Sbjct: 362  271

Query: 420  479
           
Sbjct: 422  271

Query: 480  539
           
Sbjct: 482  271

Query: 540  599
           
Sbjct: 542  271

Query: 600  659
           
Sbjct: 602  271

Query: 660  690
           
Sbjct: 662  271

[Close]

BLAST of WMU40972 vs. NCBI nr
Match: gi|1009139133|ref|XP_015886960.1| (PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba])

HSP 1 Score: 341.3 bits (874), Expect = 1.3e-90
Identity = 169/210 (80.48%), Postives = 183/210 (87.14%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           IS++HLVFNMSALWSLG VE+LGH+GLGV YYL Y+             MYH+LIQ+FK 
Sbjct: 62  ISILHLVFNMSALWSLGIVEKLGHLGLGVEYYLQYSLVMVVLSGVLVLGMYHILIQRFKL 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGIIVGYAIAWGLIHGMNNFWA SMLGW+ +VFIFSLK+S  Y+F+FLEIESVTD
Sbjct: 182 FLGHLSGIIVGYAIAWGLIHGMNNFWAVSMLGWIAVVFIFSLKRSGAYDFNFLEIESVTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
           PSLPSVRFL SGNGRTL M+ALP    E+V
Sbjct: 242 PSLPSVRFLGSGNGRTLQMSALPVAGTELV 271

Query: 300  359
           
Sbjct: 302  271

Query: 360  419
           
Sbjct: 362  271

Query: 420  479
           
Sbjct: 422  271

Query: 480  539
           
Sbjct: 482  271

Query: 540  599
           
Sbjct: 542  271

Query: 600  659
           
Sbjct: 602  271

Query: 660  690
           
Sbjct: 662  271

[Close]

BLAST of WMU40972 vs. NCBI nr
Match: gi|1012344119|gb|KYP55311.1| (Rhomboid domain-containing protein 1 [Cajanus cajan])

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 169/210 (80.48%), Postives = 183/210 (87.14%), Query Frame = -2


Query: 60  ISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTXXXXXXXXXXXXXMYHLLIQKFKF 119
           ISVIHLVFNMSALWSLG VEQLGH+GLGV YYL YT             MYHLLIQ+FK 
Sbjct: 62  ISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVVSGVLVLAMYHLLIQRFKL 121

Query: 120 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 179
           EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS
Sbjct: 122 EYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQAS 181

Query: 180 FLGHLSGIIVGYAIAWGLIHGMNNFWAFSMLGWVVLVFIFSLKKSNTYNFDFLEIESVTD 239
           FLGHLSGI+VGYAIAWGLIHGM N+WA S+LGW+VLVF+ SLK+S   + +FLEIESVTD
Sbjct: 182 FLGHLSGIVVGYAIAWGLIHGMTNYWALSLLGWIVLVFVLSLKRSGALDLNFLEIESVTD 241

Query: 240 PSLPSVRFLSSGNGRTLHMNALPTGDVEIV 299
           PSLPSVRFL+S +GRTL M+ALP G+VEIV
Sbjct: 242 PSLPSVRFLASNSGRTLQMSALPNGNVEIV 271

Query: 300  359
           
Sbjct: 302  271

Query: 360  419
           
Sbjct: 362  271

Query: 420  479
           
Sbjct: 422  271

Query: 480  539
           
Sbjct: 482  271

Query: 540  599
           
Sbjct: 542  271

Query: 600  659
           
Sbjct: 602  271

Query: 660  690
           
Sbjct: 662  271

The following BLAST results are available for this feature:

BLAST of WMU40972 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59520.1	2.7e-89	75.71	RHOMBOID-like protein 13	[more]
AT3G17611.1	4.8e-06	30.47	RHOMBOID-like protein 14	[more]

BLAST of WMU40972 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL13_ARATH	4.7e-88	75.71	RHOMBOID-like protein 13 OS=Arabidopsis thaliana GN=RBL13 PE=3 SV=1	[more]
RBD2_SCHPO	5.4e-07	30.15	Rhomboid protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rbd...	[more]
RBD2_CANGA	5.9e-06	41.33	Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / ...	[more]

BLAST of WMU40972 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711412\|ref\|XP_011656727.1\|	2.0e-102	91.90	PREDICTED: rhomboid protein 2 [Cucumis sativus]	[more]
gi\|659120143\|ref\|XP_008460036.1\|	2.0e-102	91.90	PREDICTED: rhomboid protein 2 [Cucumis melo]	[more]
gi\|703118467\|ref\|XP_010101608.1\|	4.6e-91	80.48	Rhomboid domain-containing protein 1 [Morus notabilis]	[more]
gi\|1009139133\|ref\|XP_015886960.1\|	1.3e-90	80.48	PREDICTED: RHOMBOID-like protein 13 [Ziziphus jujuba]	[more]
gi\|1012344119\|gb\|KYP55311.1\|	1.1e-89	80.48	Rhomboid domain-containing protein 1 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla007016	Cla007016	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0004381	S1_0004381	EST
S1_0063688	S1_0063688	EST
WMN02A05	WMN02A05	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 3..139 score: 4.
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 2..141 score: 1.2
None	No IPR available	PANTHER	PTHR12917	ASPARTYL PROTEASE DDI-RELATED	coord: 2..201 score: 6.1
None	No IPR available	PANTHER	PTHR12917:SF21	RHOMBOID PROTEIN 2	coord: 2..201 score: 6.1
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 3..139 score: 7.59