ClCG05G021460 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDDEELCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAKRSFCECK
BLAST of ClCG05G021460 vs. Swiss-Prot
Match: SMR1_ARATH (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana GN=SMR1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 1
BLAST of ClCG05G021460 vs. Swiss-Prot
Match: SMR1_ORYSJ (Cyclin-dependent protein kinase inhibitor SMR1 OS=Oryza sativa subsp. japonica GN=SMR1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.2e-06 Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 1
BLAST of ClCG05G021460 vs. TrEMBL
Match: A0A0A0KRI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621910 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 6.5e-54 Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of ClCG05G021460 vs. TrEMBL
Match: W9S397_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001720 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.8e-19 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 1
BLAST of ClCG05G021460 vs. TrEMBL
Match: B9HUW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s23800g PE=4 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 6.3e-17 Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
BLAST of ClCG05G021460 vs. TrEMBL
Match: A0A0A0LSQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G384460 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.2e-15 Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 1
BLAST of ClCG05G021460 vs. TrEMBL
Match: U5G4W0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s02960g PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1
BLAST of ClCG05G021460 vs. TAIR10
Match: AT3G10525.1 (AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 1
BLAST of ClCG05G021460 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 1
BLAST of ClCG05G021460 vs. TAIR10
Match: AT5G02420.1 (AT5G02420.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 4.5e-06 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 1
BLAST of ClCG05G021460 vs. TAIR10
Match: AT5G04470.1 (AT5G04470.1 cyclin-dependent protein kinase inhibitors) HSP 1 Score: 47.4 bits (111), Expect = 7.7e-06 Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 1
BLAST of ClCG05G021460 vs. NCBI nr
Match: gi|659091912|ref|XP_008446800.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]) HSP 1 Score: 220.3 bits (560), Expect = 1.9e-54 Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 1
BLAST of ClCG05G021460 vs. NCBI nr
Match: gi|778706436|ref|XP_011655851.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 9.3e-54 Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of ClCG05G021460 vs. NCBI nr
Match: gi|703138808|ref|XP_010106827.1| (hypothetical protein L484_001720 [Morus notabilis]) HSP 1 Score: 101.7 bits (252), Expect = 9.7e-19 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 1
BLAST of ClCG05G021460 vs. NCBI nr
Match: gi|1009119912|ref|XP_015876638.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 99.0 bits (245), Expect = 6.3e-18 Identity = 62/136 (45.59%), Postives = 80/136 (58.82%), Query Frame = 1
BLAST of ClCG05G021460 vs. NCBI nr
Match: gi|566192441|ref|XP_002316411.2| (hypothetical protein POPTR_0010s23800g [Populus trichocarpa]) HSP 1 Score: 95.1 bits (235), Expect = 9.1e-17 Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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