Cla97C05G103170 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDDEELCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAKRSFCECK
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_022992922.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]) HSP 1 Score: 219.5 bits (558), Expect = 6.2e-54 Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_022957068.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]) HSP 1 Score: 217.6 bits (553), Expect = 2.4e-53 Identity = 108/130 (83.08%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_008446800.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]) HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53 Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_023531359.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.2 bits (544), Expect = 2.6e-52 Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_023542380.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 5.8e-44 Identity = 100/136 (73.53%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A1S3BFF9|A0A1S3BFF9_CUCME (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103489420 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.5e-53 Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A0A0KRI0|A0A0A0KRI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41 Identity = 95/134 (70.90%), Postives = 101/134 (75.37%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A2I4DNM2|A0A2I4DNM2_9ROSI (cyclin-dependent protein kinase inhibitor SMR1-like OS=Juglans regia OX=51240 GN=LOC108981948 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21 Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|W9S397|W9S397_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001720 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17 Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A2K1YZ06|A0A2K1YZ06_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G231600v3 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.6e-16 Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of Cla97C05G103170 vs. Swiss-Prot
Match: sp|Q29Q81|SMR6_ARATH (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05 Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TAIR10
Match: AT5G40460.1 (unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 9.0e-07 Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TAIR10
Match: AT1G60783.1 (unknown protein) HSP 1 Score: 43.9 bits (102), Expect = 8.5e-05 Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of Cla97C05G103170 vs. TAIR10
Match: AT5G02420.1 (unknown protein) HSP 1 Score: 43.9 bits (102), Expect = 8.5e-05 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|