Cla97C05G103170 (gene) Watermelon (97103) v2

NameCla97C05G103170
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
LocationCla97Chr05 : 31303413 .. 31303790 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

mRNA sequence

ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

Coding sequence (CDS)

ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAACCTTCAAATTCCACGGCCGTCGACTTCAATGAGCGCCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCGCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCAAGTTTCGATCACGAAGACAGAGTAAGAAAATCAGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

Protein sequence

MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDDEELCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAKRSFCECK
BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_022992922.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 6.2e-54
Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRID-----DEELCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ADHGGVIIQK+RID     DEELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGDEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_022957068.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata])

HSP 1 Score: 217.6 bits (553), Expect = 2.4e-53
Identity = 108/130 (83.08%), Postives = 119/130 (91.54%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDD-----EELCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ADHGGVIIQK+RID+     EELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_008446800.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTS--MSADHGGVIIQKDRIDD------EELCC 60
           MST+LDLRRTLLEIVRRP I LQIP PST+  M  D GGVIIQKDRID       EELCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDR 120
           RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL +SFDHEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VRKSAKRSFCECK 126
           VRKSAKRSFCECK
Sbjct: 121 VRKSAKRSFCECK 133

BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_023531359.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 2.6e-52
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDD-----EELCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ADHGGVIIQK+R D      EELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERNDKIDGGAEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

BLAST of Cla97C05G103170 vs. NCBI nr
Match: XP_023542380.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 5.8e-44
Identity = 100/136 (73.53%), Postives = 108/136 (79.41%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDDE-----------E 60
           MST LDLRRT LE VRR  +NL IPRPS+S + DH    IQK  ID             E
Sbjct: 1   MSTGLDLRRTFLETVRRRDLNLPIPRPSSS-APDHSDT-IQKQSIDXXXXXXXXXXXXGE 60

Query: 61  LCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDH 120
           LCCRTPTSAENKIPA++QCPPAPRKRKRPPSCRRRLMELEFV+IV+REEIEPYL SSF+H
Sbjct: 61  LCCRTPTSAENKIPALLQCPPAPRKRKRPPSCRRRLMELEFVQIVSREEIEPYLNSSFEH 120

Query: 121 EDRVRKSAKRSFCECK 126
           EDRVRKSAKRSFCECK
Sbjct: 121 EDRVRKSAKRSFCECK 134

BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A1S3BFF9|A0A1S3BFF9_CUCME (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103489420 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTS--MSADHGGVIIQKDRIDD------EELCC 60
           MST+LDLRRTLLEIVRRP I LQIP PST+  M  D GGVIIQKDRID       EELCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDR 120
           RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL +SFDHEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VRKSAKRSFCECK 126
           VRKSAKRSFCECK
Sbjct: 121 VRKSAKRSFCECK 133

BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A0A0KRI0|A0A0A0KRI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 95/134 (70.90%), Postives = 101/134 (75.37%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIP---------RPSTSMSADHGGVIIQKDRIDDEELC 60
           MST+LDLRRTLLEIVRRP I LQIP                       + ++    EEL 
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPXXXXXXXXXXXXXXXXXXXXXXXVDEEDGGAEELS 60

Query: 61  CRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHED 120
           CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL SSFDHED
Sbjct: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120

Query: 121 RVRKSAKRSFCECK 126
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 134

BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A2I4DNM2|A0A2I4DNM2_9ROSI (cyclin-dependent protein kinase inhibitor SMR1-like OS=Juglans regia OX=51240 GN=LOC108981948 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHG-GVIIQKDRIDDEELCCRTPTSAE 60
           MSTDL+    L +I R         + S  ++ D G GV+++ ++ DD E CCRTPTS E
Sbjct: 1   MSTDLEFLHDLSKIPRLTVETKTTAQASNDIADDIGTGVLVEPEKEDDNE-CCRTPTSKE 60

Query: 61  NKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAKR 120
           ++IP ++ CPPAPRK +R PSC+R+L EL+F EIVN EE++ + RSSF++   +    +R
Sbjct: 61  HRIPVILDCPPAPRKPRRVPSCKRKLSELKFFEIVNPEEVDAFFRSSFENVSAITSVKRR 120

Query: 121 SFCECK 126
           S C CK
Sbjct: 121 SRCPCK 125

BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|W9S397|W9S397_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001720 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQK---------DRIDDEELC 60
           MSTDL+  + L +I R   I +Q P PS S   +    IIQ+         D I +E++ 
Sbjct: 1   MSTDLEFCQALPKI-RLSPIQIQTPEPSES-KTEAARSIIQRLDNDRRNSCDNIKNEDII 60

Query: 61  ----------CRTPTSAENKIPAVVQCPPAPRK--RKRPPSCRRRLMELEFVEIVNREEI 120
                     CRTPTSAE++IPA++ CPPAPRK    R PSC+R+L EL+F ++VNREEI
Sbjct: 61  YEEKEEINNECRTPTSAEHRIPAILSCPPAPRKPATARAPSCKRKLSELDFFDVVNREEI 120

Query: 121 EPYLRSSFDHEDRVRKSAKRSFCECK 126
           + + RSSF        SAKRS C CK
Sbjct: 121 DRFFRSSF--AKAATGSAKRSCCPCK 142

BLAST of Cla97C05G103170 vs. TrEMBL
Match: tr|A0A2K1YZ06|A0A2K1YZ06_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G231600v3 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.6e-16
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0

Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSADHGGVIIQKDRIDDEELCCRTPTSAEN 60
           MSTDL+L   L  I  RPAI ++  + S S +  +  +I Q++   D++  C+TP S E+
Sbjct: 1   MSTDLELLHDLPRIQVRPAIKIETLQ-SCSATDGNKAIIQQENSETDDD--CQTPKSEEH 60

Query: 61  KIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFD 109
           KIPAV+ CPPAPRK KR  SC+R+L E++F EIVN EE++ + +SSF+
Sbjct: 61  KIPAVLSCPPAPRKAKRNISCKRKLTEIDFFEIVNGEEVDSFFQSSFE 105

BLAST of Cla97C05G103170 vs. Swiss-Prot
Match: sp|Q29Q81|SMR6_ARATH (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 40 IQKDRIDDEELCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLM 87
          +++D  ++EE C  TPT+ E KIP +++CPPAPRKR+    CR  ++
Sbjct: 48 VEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

BLAST of Cla97C05G103170 vs. TAIR10
Match: AT5G40460.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 9.0e-07
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 40 IQKDRIDDEELCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLM 87
          +++D  ++EE C  TPT+ E KIP +++CPPAPRKR+    CR  ++
Sbjct: 48 VEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

BLAST of Cla97C05G103170 vs. TAIR10
Match: AT1G60783.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 8.5e-05
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0

Query: 46 DDEELCCRTPTSAENKIPAVVQCPPAPRKRK 77
          +DE+LC  TPT+   +IP V+ CPPAP+KRK
Sbjct: 49 EDEDLCPTTPTADSVRIPTVIPCPPAPKKRK 79

BLAST of Cla97C05G103170 vs. TAIR10
Match: AT5G02420.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 8.5e-05
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0

Query: 13  EIVRRPAINLQIP-RPSTSM-SADHGGVIIQKDRIDDEELCCRTPTSAENKIPAV--VQC 72
           EI       +++P RP   +  +DH      +D   +EE  C+TPTS+++KIP V    C
Sbjct: 9   EIQEEDVEKIRLPTRPELDIPDSDH------EDPTVNEEEGCKTPTSSDHKIPEVKYTLC 68

Query: 73  PPAPRKRK--RPPSCRRRLMELEFVEIVNR------EEIEPYLRSSFDHEDRVRKSAKR 120
           PPAPRK K  R    +R+L     V +VNR       EIE +     D + R++KS K+
Sbjct: 69  PPAPRKPKPNRSSGTKRKLTP---VNVVNRIPIDLSREIEMFFE---DLDRRIKKSRKQ 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022992922.16.2e-5483.85cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima][more]
XP_022957068.12.4e-5383.08cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata][more]
XP_008446800.16.9e-5384.21PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo][more]
XP_023531359.12.6e-5282.31cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo][more]
XP_023542380.15.8e-4473.53cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
tr|A0A1S3BFF9|A0A1S3BFF9_CUCME4.5e-5384.21cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A0A0KRI0|A0A0A0KRI0_CUCSA1.8e-4170.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1[more]
tr|A0A2I4DNM2|A0A2I4DNM2_9ROSI2.1e-2145.24cyclin-dependent protein kinase inhibitor SMR1-like OS=Juglans regia OX=51240 GN... [more]
tr|W9S397|W9S397_9ROSA2.4e-1744.52Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001720 PE=4 SV=1[more]
tr|A0A2K1YZ06|A0A2K1YZ06_POPTR7.6e-1647.22Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G231600v3 PE=... [more]
Match NameE-valueIdentityDescription
sp|Q29Q81|SMR6_ARATH1.6e-0544.68Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
AT5G40460.19.0e-0744.68unknown protein[more]
AT1G60783.18.5e-0558.06unknown protein[more]
AT5G02420.18.5e-0535.29unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0008150 biological_process
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0016301 kinase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G103170.1Cla97C05G103170.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142:SF13CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SIM-RELATEDcoord: 1..119
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 1..119

The following gene(s) are paralogous to this gene:

None