ClCG05G003720 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G003720
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionF-box domain containing protein
LocationCG_Chr05 : 3509403 .. 3513132 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCAGATATTTTTGGAAGAAAACTGGCTATCGTTCTTCCAGTATAATTTACAACCGCCGTTCCCTCAGCAATCAATGTTAATCGCCGATCGTTTCATCCTCTTCAAAACCCTTCTCCCTCTATAAACCCCTATCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGGTCCGCATCGTCTCCCCATTAATCCGTTCTTGATGTGGTGTGCTTGTGGTTTAATTCGATTCTCTGGAATTGGATTTTGGTATTTCATTTTTTGATAGCATTAGAAATTGTTCGCCCAGTGTAAATGGAATCAAGTCACTCGTTTTTTGCGTTTAGAAGTTGGATTTGTTTGTTGTCGAATGGGGTTCTGGGATTCTGTGGCTTTCATTTCTGTTTTGTTTTATGTACTTGTCTTTCCCCCCCATCGGGATTTAATTGTTAAATTTATGTACTCTGTGGCTTTTTCTACGTCGATGGATCATAACAAACTGCAGTTAGTGGATTCGTAGTGTAATCTCTCTCACGTTAATTTCAATTATTTCTCCGCGTTATTGAAAATTTGTTTTTGACCCATTTCCTTGATTCTTTTTAAGAGTGAGTTTGGATGGCTTTTAGACGGTTAAAGTGCTTTAAGCCTATTAAACTTATCCAAATGCATTCATAGTTCTTTGGGTTGACAATAAAAAAATCCTAGATACGGAATCTTGACATCATGAAATCCTTTGGAGAAATACTTAGGTTATTGTATCCTATTTTCGCCCTTTTATTGATATGAAAGTGTGTTTGAAAGCTATATTCTAGATTATTTTCTAAAATTTTCGTCTTCTTTTAGGCCCTTAGAGAAAGTTTGGAATTTGAAAACGCATTTTAATTTATTTGCTTATCCGGAAGTATTAGATGTTATTGTGATATGATTACATACATAAATCAAGTTGAAGCCAAGAAATTCACATCCTTCTTACTAGGTAGCCCATCCCTGTGTATGCACCAGGGGATCGTTATGACTGCCTCTGCCTGTCACGTCTTATTAGACATTGGGATACATGATCTAAAATTTTACAAAATTGAAATTGTGTAGCGTCAAAAAGAATGAACATTCACTACTGTAAAATTGAACATTTGGTAAGCAAATTTCTTGTATTTTCTCTTAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAGTAAAGTCTCCTTTTCCACCTACAAGCAATAGTTGTGGGAGTGTGCTGTTAGCCTGTTACATATACATAATATTATAATATATGAATGTTGTTCAATTTATAGTTGTGTGACCACAGTTGGGATGACCAAGTGCATCTACTGAATCTCGTCATCAATAATTTAGAAAATGTTCTGCACATGTACTCTTAAGCATGGCATAGTAAGAACTGTGAAAGCTCTATTACTTTGATATTCTTTTTTATGGGTTTAACTTCTTGTATCAGACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGTATGCTTGTCTTTTATGCAGTTATCAAACACTTTTCTGGACGCTAACCATCATTAGATGACATGAAGCCTGGCTATCTTATAAGAGAAGATTATTTAAATTAACTGGATGAAATTCATTTACGTTTGTGTTCTATGATTAATTAAACCTGACTATTTTATTAACATATTCTACACATGACCACCTTCTACACCATACCTTAGGCAGGCATCATACGAAGATTCATGCTATCTACATCTAATTTTATCCTCGTCTTAGTTGCACACCAACTATATGGTTTCCATAAGAAATATTTGGAATTTAATGGAATGCCCAACTCACTTCGAGAGAGGTTAGATGGCAGATGATGGATGCTTTAGCAATATGAATTTCATGGATCATCCTCACAATTTATATAGCCATGTTAGTGATTGTGTTATAAAACATCTAACATGCACATAAGAACTTCCATACTACCAATTGGATTTGCAACTGTCTATGGAGGATGGATACTTCATTGTATATTATCTGTCAATTTTCAAATTTGTGTCGTGTCATGGCTTCTTTGTGGAATGTCTATACTGGTGCTCATAGTATTGATGGCCGATTGGCCGTACTAGTGATTGAGAGGGTATATCCCAAAAGGTGTCTACTACTTGAGCCTGAATACCTTTTGACAAGTACGTACAATTACTATTATTGTACTCTAGCTGTCTGCTGGTTTTAAACTAATCTGCCAATTTTATGCTTAGATGCAAATGTGATCTAAAGTTAATGTGCACCTCACCAAAATTTCCACGTCTAAATATTTAACACACCTTTCCTGAAGGGCGAAATTGATTAATCATAATGCCTGGTAAGTTAATTTCTGTTCCTTTCAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAACAGCAGCTGGTGGTAAAATTGCTTGTTTGCTCTTTCTTGAAGAGGCTTCTGCCACTTTGCTGTGTACATAATTTTGGGAGTATGGGAAAGGAGTTGGTGTTGGTTTTGGATCACAAGTTATTTTGGTCCTTTGCCTAAAAATGGGAGTAGAATTCGTATGCTTGTAGAATTTGTTTATTATTATTATTTTTTCCTTAGAGAAAATGTATTTAGTTGTTGCTTACTAGTAAGTAGTAGTAGGATTTGAAATTAATAAGTTGAGTTCATGTTTGATGAGTGAGCTTGTTTTTCTTAAGTTATATACTTGTTAACATCTTTTTTTTTTTTTTGTGAGAAAACAAAGAACATTAACAGAAGAGCAACAAAAGCTTATACTCCTCGACAAGCTGAATCAACGAATGCAATTACGAGCAAGACCAAGACCGTTTGCAACAAACAAGTCAAAACTCTTCCAGATACAACTCTGCTGCTAGATTGAAAATGATTGAAGTGAAGTGACTAATTTCATGCTAAACAAGTTTTCTGGCCTCTATTGTTATTCATACATAATTCTTAAGGCCTTTGTTCTGTACGTCAACTCAAACATGTCTCAAATATCATATTTTAGATTCAAGTTTATTGCTCCTATCTGCAACCTAATATTTATGTAGAAAAATAGAACTCCTAATATTTAGGTATATTGTATATTAACTACTAAGTTTTGCCAATCATGTACAAATATATATGGTACAAGTAATTGAAAA

mRNA sequence

CTTTTCAGATATTTTTGGAAGAAAACTGGCTATCGTTCTTCCAGTATAATTTACAACCGCCGTTCCCTCAGCAATCAATGTTAATCGCCGATCGTTTCATCCTCTTCAAAACCCTTCTCCCTCTATAAACCCCTATCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAACAGCAGCTGGTGAACATTAACAGAAGAGCAACAAAAGCTTATACTCCTCGACAAGCTGAATCAACGAATGCAATTACGAGCAAGACCAAGACCGTTTGCAACAAACAAGTCAAAACTCTTCCAGATACAACTCTGCTGCTAGATTGAAAATGATTGAAGTGAAGTGACTAATTTCATGCTAAACAAGTTTTCTGGCCTCTATTGTTATTCATACATAATTCTTAAGGCCTTTGTTCTGTACGTCAACTCAAACATGTCTCAAATATCATATTTTAGATTCAAGTTTATTGCTCCTATCTGCAACCTAATATTTATGTAGAAAAATAGAACTCCTAATATTTAGGTATATTGTATATTAACTACTAAGTTTTGCCAATCATGTACAAATATATATGGTACAAGTAATTGAAAA

Coding sequence (CDS)

ATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAA

Protein sequence

MAQSDFLGERARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL
Homology
[Close]
BLAST of ClCG05G003720 vs. TrEMBL
Match: A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-129
Identity = 227/247 (91.90%), Postives = 232/247 (93.93%), Query Frame = 1 

Query: 1   MAQSDFLGERARWKARKKK--RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLLMAIFSYL 60
           MAQSDFLG  ARWK+RKKK  RE VSD RGQQN  T N LLQDPF VLGSDLL+AI SYL
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120
           DARSVALSL VSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
           GKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 240
           WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 AGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]
BLAST of ClCG05G003720 vs. TrEMBL
Match: A0A061EM39_THECC (F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 166/239 (69.46%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 8   GERARWKARKKKRENVSDGRGQQNGTPN--VLLQDPFVVLGSDLLMAIFSYLDARSVALS 67
           GER R K RK+  EN  + + Q+ G     V+ +DP  V G D+++ I S LDARSVALS
Sbjct: 16  GER-RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 75

Query: 68  LLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILR 127
           LLVSR+W+ VASSDRLWSSKC ELW GKAHIPR +Q+RGL KLAAYS+SVMDGKRTRI++
Sbjct: 76  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 135

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHE C+
Sbjct: 136 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 195

Query: 188 STVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           S VTS VG+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DA+K GGTGPL
Sbjct: 196 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]
BLAST of ClCG05G003720 vs. TrEMBL
Match: A0A067KNI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 7.3e-94
Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 1 

Query: 12  RWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRS 71
           R + ++KK EN ++    +    + L QDP   LG D+++ I S LDARSVALSLLVSR 
Sbjct: 57  RRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSLLVSRG 116

Query: 72  WYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDH 131
           W+ +ASSDRLWSSKC ELWLGKAHIPRL+Q RG+ KLAAYSLSVMDGKRTRI+R+DLCDH
Sbjct: 117 WHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRDDLCDH 176

Query: 132 AWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSF 191
           AW+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQTADP DRVWGGHE CFS VTSF
Sbjct: 177 AWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFSVVTSF 236

Query: 192 VGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           + DG IREHYVRINRWPRM VSR +DWSW+MSNH   YSS+ DA K GGTGP+
Sbjct: 237 IADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

[Close]
BLAST of ClCG05G003720 vs. TrEMBL
Match: B9RWR4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.6e-93
Identity = 166/235 (70.64%), Postives = 187/235 (79.57%), Query Frame = 1 

Query: 10  RARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVS 69
           R  +K RK+K++  S+G   +        QDP  VLG DL+M I S LDARSVALSLLVS
Sbjct: 26  RDDFKERKRKKKKKSEGEDCER-------QDPLEVLGWDLMMKILSNLDARSVALSLLVS 85

Query: 70  RSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLC 129
           RSW  +A SDRLW+SKC ELWLGKAHIPRL+Q RGL KLAAYSLSVMD KRTRI+R+DLC
Sbjct: 86  RSWNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDDLC 145

Query: 130 DHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVT 189
           DH W+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQ+ADP DRVWGGHE CFS VT
Sbjct: 146 DHVWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSVVT 205

Query: 190 SFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           SF+GDG IREHYVRINRWPR+ VSR +DWSW+MSNH   YSSI DA K GGTGPL
Sbjct: 206 SFIGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

[Close]
BLAST of ClCG05G003720 vs. TrEMBL
Match: F6HS42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 157/230 (68.26%), Postives = 185/230 (80.43%), Query Frame = 1 

Query: 14  KARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRSWY 73
           K ++K+++   +G+ +       +LQDP  V GSD++M I SYLDA SVALSLLVSR W+
Sbjct: 44  KKKRKRQDGAEEGKSE-------VLQDPLEVFGSDMMMMILSYLDAPSVALSLLVSRGWH 103

Query: 74  AVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDHAW 133
            VASSDRLWS+KC ELW GKAHIPR++Q RGL KLAAYS SVMDGKR+RI ++DLCDH W
Sbjct: 104 GVASSDRLWSTKCEELWCGKAHIPRVSQERGLSKLAAYSFSVMDGKRSRITKDDLCDHVW 163

Query: 134 QFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVG 193
            FHFN+ AP YWR+LDPYW+G+ P MRRYFHPDGSQTADP D+VWGGHE C+S VTSFVG
Sbjct: 164 NFHFNRGAPDYWRNLDPYWKGTGPPMRRYFHPDGSQTADPGDQVWGGHECCYSIVTSFVG 223

Query: 194 DGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGP 244
            G+IREHYVRINRWP+M V R  DWSW+MSNH   YSSI DA+K GGTGP
Sbjct: 224 GGKIREHYVRINRWPQMSVFRKPDWSWEMSNHLYCYSSIPDADKEGGTGP 266

[Close]
BLAST of ClCG05G003720 vs. NCBI nr
Match: gi|449432472|ref|XP_004134023.1| (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 1.6e-129
Identity = 227/247 (91.90%), Postives = 232/247 (93.93%), Query Frame = 1 

Query: 1   MAQSDFLGERARWKARKKK--RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLLMAIFSYL 60
           MAQSDFLG  ARWK+RKKK  RE VSD RGQQN  T N LLQDPF VLGSDLL+AI SYL
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120
           DARSVALSL VSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
           GKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 240
           WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 AGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]
BLAST of ClCG05G003720 vs. NCBI nr
Match: gi|659075958|ref|XP_008438422.1| (PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 6.5e-128
Identity = 225/254 (88.58%), Postives = 231/254 (90.94%), Query Frame = 1 

Query: 1   MAQSDFLGERARWKARKKK---------RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLL 60
           MAQSDFL   ARWK RKKK         RE VSD RGQQN  T N +LQDPF VLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MAIFSYLDARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAA 120
           M I SYLDARSVALSLLVSRSWYAVASSDRLWSSKC+ELWLGKAHIPRLAQSRGLPKLAA
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 YSLSVMDGKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
           YSLS+MDGKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYS 240
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

Query: 241 SIADAEKAGGTGPL 245
           SIAD +KAGGTGPL
Sbjct: 241 SIADPDKAGGTGPL 254

[Close]
BLAST of ClCG05G003720 vs. NCBI nr
Match: gi|590657285|ref|XP_007034521.1| (F-box family protein [Theobroma cacao])

HSP 1 Score: 356.7 bits (914), Expect = 3.3e-95
Identity = 166/239 (69.46%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 8   GERARWKARKKKRENVSDGRGQQNGTPN--VLLQDPFVVLGSDLLMAIFSYLDARSVALS 67
           GER R K RK+  EN  + + Q+ G     V+ +DP  V G D+++ I S LDARSVALS
Sbjct: 16  GER-RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 75

Query: 68  LLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILR 127
           LLVSR+W+ VASSDRLWSSKC ELW GKAHIPR +Q+RGL KLAAYS+SVMDGKRTRI++
Sbjct: 76  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 135

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHE C+
Sbjct: 136 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 195

Query: 188 STVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           S VTS VG+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DA+K GGTGPL
Sbjct: 196 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]
BLAST of ClCG05G003720 vs. NCBI nr
Match: gi|802633773|ref|XP_012077663.1| (PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas])

HSP 1 Score: 351.7 bits (901), Expect = 1.1e-93
Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 1 

Query: 12  RWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRS 71
           R + ++KK EN ++    +    + L QDP   LG D+++ I S LDARSVALSLLVSR 
Sbjct: 57  RRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSLLVSRG 116

Query: 72  WYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDH 131
           W+ +ASSDRLWSSKC ELWLGKAHIPRL+Q RG+ KLAAYSLSVMDGKRTRI+R+DLCDH
Sbjct: 117 WHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRDDLCDH 176

Query: 132 AWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSF 191
           AW+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQTADP DRVWGGHE CFS VTSF
Sbjct: 177 AWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFSVVTSF 236

Query: 192 VGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           + DG IREHYVRINRWPRM VSR +DWSW+MSNH   YSS+ DA K GGTGP+
Sbjct: 237 IADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

[Close]
BLAST of ClCG05G003720 vs. NCBI nr
Match: gi|255554286|ref|XP_002518183.1| (PREDICTED: uncharacterized protein LOC8265676 [Ricinus communis])

HSP 1 Score: 349.4 bits (895), Expect = 5.2e-93
Identity = 166/235 (70.64%), Postives = 187/235 (79.57%), Query Frame = 1 

Query: 10  RARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVS 69
           R  +K RK+K++  S+G   +        QDP  VLG DL+M I S LDARSVALSLLVS
Sbjct: 26  RDDFKERKRKKKKKSEGEDCER-------QDPLEVLGWDLMMKILSNLDARSVALSLLVS 85

Query: 70  RSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLC 129
           RSW  +A SDRLW+SKC ELWLGKAHIPRL+Q RGL KLAAYSLSVMD KRTRI+R+DLC
Sbjct: 86  RSWNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDDLC 145

Query: 130 DHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVT 189
           DH W+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQ+ADP DRVWGGHE CFS VT
Sbjct: 146 DHVWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSVVT 205

Query: 190 SFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           SF+GDG IREHYVRINRWPR+ VSR +DWSW+MSNH   YSSI DA K GGTGPL
Sbjct: 206 SFIGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

The following BLAST results are available for this feature:
BLAST of ClCG05G003720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L471_CUCSA1.1e-12991.90Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1[more]
A0A061EM39_THECC2.3e-9569.46F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1[more]
A0A067KNI3_JATCU7.3e-9469.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1[more]
B9RWR4_RICCO3.6e-9370.64Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1[more]
F6HS42_VITVI1.2e-9168.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=... [more]
BLAST of ClCG05G003720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432472|ref|XP_004134023.1|1.6e-12991.90PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus][more]
gi|659075958|ref|XP_008438422.1|6.5e-12888.58PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo][more]
gi|590657285|ref|XP_007034521.1|3.3e-9569.46F-box family protein [Theobroma cacao][more]
gi|802633773|ref|XP_012077663.1|1.1e-9369.96PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas][more]
gi|255554286|ref|XP_002518183.1|5.2e-9370.64PREDICTED: uncharacterized protein LOC8265676 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G003720.1ClCG05G003720.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 48..86
score: 4.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 35..93
score: 4.45
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 40..86
score: 2.6
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 16..243
score: 2.1
NoneNo IPR availablePANTHERPTHR22844:SF163SUBFAMILY NOT NAMEDcoord: 16..243
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G003720Csa3G133360Cucumber (Chinese Long) v2cuwcgB222
ClCG05G003720MELO3C006351Melon (DHL92) v3.5.1mewcgB427
ClCG05G003720Cla021460Watermelon (97103) v1wcgwmB286
ClCG05G003720Cla97C05G084390Watermelon (97103) v2wcgwmbB229
ClCG05G003720Bhi01G000016Wax gourdwcgwgoB434
ClCG05G003720CSPI03G11330Wild cucumber (PI 183967)cpiwcgB226
ClCG05G003720Cucsa.256040Cucumber (Gy14) v1cgywcgB451
ClCG05G003720CmaCh14G018640Cucurbita maxima (Rimu)cmawcgB233
ClCG05G003720CmoCh14G019080Cucurbita moschata (Rifu)cmowcgB219
ClCG05G003720Lsi05G017950Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G003720Cp4.1LG03g18360Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G003720Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G003720CsGy3G011360Cucumber (Gy14) v2cgybwcgB203
ClCG05G003720MELO3C006351.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G003720Carg06262Silver-seed gourdcarwcgB0935
ClCG05G003720Carg16519Silver-seed gourdcarwcgB0226
ClCG05G003720CsaV3_3G011440Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G003720Watermelon (Charleston Gray)wcgwcgB160
ClCG05G003720Watermelon (Charleston Gray)wcgwcgB164
ClCG05G003720Cucumber (Gy14) v1cgywcgB238
ClCG05G003720Cucurbita maxima (Rimu)cmawcgB319
ClCG05G003720Cucurbita maxima (Rimu)cmawcgB464
ClCG05G003720Cucurbita maxima (Rimu)cmawcgB737
ClCG05G003720Cucurbita maxima (Rimu)cmawcgB795
ClCG05G003720Cucurbita moschata (Rifu)cmowcgB315
ClCG05G003720Cucurbita moschata (Rifu)cmowcgB463
ClCG05G003720Cucurbita moschata (Rifu)cmowcgB743
ClCG05G003720Cucurbita moschata (Rifu)cmowcgB792
ClCG05G003720Wild cucumber (PI 183967)cpiwcgB141
ClCG05G003720Wild cucumber (PI 183967)cpiwcgB247
ClCG05G003720Cucumber (Chinese Long) v2cuwcgB136
ClCG05G003720Cucumber (Chinese Long) v2cuwcgB240
ClCG05G003720Melon (DHL92) v3.5.1mewcgB335
ClCG05G003720Melon (DHL92) v3.5.1mewcgB385
ClCG05G003720Watermelon (97103) v1wcgwmB282
ClCG05G003720Watermelon (97103) v1wcgwmB311
ClCG05G003720Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G003720Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G003720Cucurbita pepo (Zucchini)cpewcgB679
ClCG05G003720Bottle gourd (USVL1VR-Ls)lsiwcgB016
ClCG05G003720Bottle gourd (USVL1VR-Ls)lsiwcgB337
ClCG05G003720Cucumber (Gy14) v2cgybwcgB129
ClCG05G003720Cucumber (Gy14) v2cgybwcgB222
ClCG05G003720Melon (DHL92) v3.6.1medwcgB376
ClCG05G003720Silver-seed gourdcarwcgB0220
ClCG05G003720Silver-seed gourdcarwcgB0757
ClCG05G003720Silver-seed gourdcarwcgB1045
ClCG05G003720Cucumber (Chinese Long) v3cucwcgB148
ClCG05G003720Cucumber (Chinese Long) v3cucwcgB246
ClCG05G003720Watermelon (97103) v2wcgwmbB237
ClCG05G003720Watermelon (97103) v2wcgwmbB242
ClCG05G003720Wax gourdwcgwgoB412
ClCG05G003720Wax gourdwcgwgoB447