MELO3C006351.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006351.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionF-box protein GID2
Locationchr06 : 2746636 .. 2750154 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCTTGGTTGGTATCTTCTCCTATTGCAATTTGCAACCGCCGTTCCTTCAACAATGTCGGCTCGGTTGCAATGTTAATCGCCGATCGTTCATCCTCGTCAAAAAACCCTTCACTATAAACCCCTCTCGCCTCCTCTTCAGCTTTGAATTTTATGGCGCAAAGCGACTTCCTCGACGGCGGAGCTCGGTGGAAAACTAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCGAGAGACTGTCTCCGATGAACGAGGGCAACAAAATAGAAGAACCGGAAATCCTATTCTCCAAGATCCTTTTGAGGTTTTAGGCTCTGATCTATTAATGATTATACTGAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTTGCTTCAAGCGATCGTCTATGGAGTTCGAAGGTCAGCGTCTTCACTCCGTTAATTAGTTGATGTTATTGTGTGCTTGTGATTTAATTCGATTTTATTGAATTGGATTTTGGTATTTCCTGTTTTGTTTGTATTAGTAGTTAGTAATTGTTCGGCTAGTGCGAATGGAATCGAGTCACTCGTTTTTGTGTTTAGAAGTTCGATTCGTTTCTGTAGCTTTCATTTCTGTTTTTAATCTTTAATTTATGTAGCCTGTGTCTCTTTCTGCCGAATTTGGTCTTTTTTACATCGATGGATCATAGGTTCATAACAGACTGCATATAGTTGATTAGTAGTTCAATCTCTCTCACGTTAATTTGAATTATTTATCCGGGCTATTGAAAATTTATCTTCAGACCATTTCCTTGACTCTTTCCAAGTGCGAGTTTAGATGGTTTTGGGATTGGTAAAGTGCTTTAAGCCTACTAAAATTATCAAAGTGTATTCATAGTTTTTTGGGTAGATAATCAAAATTTCCTAGATACGGAATCTCGACATCATGTAATCCTTTGGAGAAATACTTAGGTTGTAGTATACTTCTTTCGCCCTTAATGATATGAAATTGTGTGTGCATAGTTTTGACTTATATCTACAATGTAATGTCGAGAGCTTGTTTAGGTGTGTTTGGAAGGTATTCTAAATTATTTTCTAAAATTTCTGTCTTCTTTTAGGCCCTTAGAAAATTTGGAATTTGAAGATGTGTTTTAGTTTATTTGCATAACCGCAAGTAGTCGATGTTATTGTGATATGATTACGTACATAAACTCTTTATATGAACAAGAGTTGAAGTTGAACCCAAGAAGTTCATATCTTTCTTAGTAAGAGTGATGATTTCATGTTTATTGGTTGTGTGCAATGCTAAGTCTCTGGAGGTTGGAGAGTTTCTTGGCTTTTTCGAATGGTTGTCTCTGCTTTATTCAAGAACTGGTTTGCATTTTCTTTTACTAAAATTAATTTTTTTAAAAAAAAATCCCCATCCGACCTGCTTTGGACTTTGAACCGGGTCGGGTCCGATTCTGGTTGGGTTTCAAGGAAATCAACCCGATTACACCCCTACTTCTTACTGGGTAGCCCATTCCTGTGTATGGACATGGGATGATTGTGACTGCCTGTCATGTCTCATTAGATACTGGGATAGAAGATCGAAAATTTTACAATTCTGAAATTGTCTAGCAGCAAAGATAACTGAACATTTGGTAAGATAATTTATTGAGTTTTCTCTCAGTGCCTGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCGCAAAGCCGAGGTCTTCCAAAGCTAGCTGCTTATTCATTATCCATTATGGATGGCAAACGGGTTAAGTCTCTTTTTCCACCCTCAAGTATAGTTGTGGGAGTGTGCTGTTACATATACATATATATGAATGTTACTCAATTTATAGTTGTGTGGCCGCAGTTGGGATGACCAAATGCACCTACTAATCAATCTTATCGTCAATAATTTAGAAAAATGTTCTAAACATGTACTCCCAATCATGGATAGTAAGAACTGAGAAGCTTGTATTACTTTGATATTATTTTTTTACGGGTTTAACTTCTTGTATCAGACTCGCATTATGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGTATGCTAGTCTTTATGCAATTATGAAAACTTTTTTCTGTGCTATCCATCATGTAGTGAATTAGATGACATGAAGCCTGGTTAAGAGAGAAGGATATTTAAATTAAGTGGATGACTTTTATGTTTGTGTTTTATGATTAATTAAATCTGACTATGTTATTAACATATTCTCTAAAATTTGATCACCTTCTATCTCTTCTACACCATACCATAGGCACCATACGACGCTTCATGCTATCTGCATCTAATTTTATCTTGTCTTTTAAAGTTAAATGGTTGGTGATGGATGCTTTGGCAATACCAAATTCATGGATGATCCTCACGATTTGGATAGCCATGCTAGTGGTTGTATAATAAAAAGTCAAACATGCATGAAAAATTCCCATAGCACAGGTACTTTATCGTATATAATGTGTCCATTTTCAAATTTGTGTGGTGTCATGCTTCTTTGTGAAATTTTTATGCTGGTGCTTGTAGTATTGACAGCCGTAATACTGATTTAGAGGGTATGTCCAAATACCAATTGACAAGTACTAGTACTAGTGCTCATAGTATTGATGGCCATAAGTTGTCAAGCTTGAGCTCGAATACCAATTGACATGTGCAATTACATGGTTCTATTAGCGTGCTCTAGCTGCTTGCTGGTGCTGGTTTTAAACCAATCTACCAATCTTCTGCTTAGATGCTAATGTATCTAAAGTCCATGTGCACAAATCTATAAGGCTCCTTTCCAGAAGGGGCAAATTGATTCATAATATCTGGAAGGTTAATTTCTGTTTCCTTCAGGAAGCTCCAGTATACTGGCGAGATCTTGATCCATATTGGCAAGGAAGCCACCCTCTCATGCGCCGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGTCATGAAAGCTGCTTTTCTACTGTTACAAGTTTTGTTGGTGATGGGGAGATCAGAGAACACTATGTTAGAATAAACAGATGGCCACGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAGGATGTCTAATCACTTCACCTCCTACTCGAGCATAGCCGATCCTGACAAGGCTGGCGGGACAGGTCCACTTTAACAGCAGCTGGTGATCAAATTGCTTGTTTGCTCTTTCTTCTAGAGGCTGCTGTTTTGCTCTTTGTACAGAATTCTTGGGAATATAGTATAGGGAAGGAATTGGTGATAATTTTGGTTGGATCACATGTTTGTTTGGTCCTTTGCCTAAAAATGGGAGTAGCTTCGTATGTTTCTAGGATTTCCTTATTGTTACTGTTAGTTTTTTCCTTGAGAGAATGTATTTAATTAGATGGTTGCTTACTAGCAGGTAGTAAGATTTGAAATTAATAAGTTGAGTTTGTTTTTCTTAAGTTACATATCTGTTAAATGTTATAAAAATAATTAGATAGGAAGTTA

mRNA sequence

AAAGCTTGGTTGGTATCTTCTCCTATTGCAATTTGCAACCGCCGTTCCTTCAACAATGTCGGCTCGGTTGCAATGTTAATCGCCGATCGTTCATCCTCGTCAAAAAACCCTTCACTATAAACCCCTCTCGCCTCCTCTTCAGCTTTGAATTTTATGGCGCAAAGCGACTTCCTCGACGGCGGAGCTCGGTGGAAAACTAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCGAGAGACTGTCTCCGATGAACGAGGGCAACAAAATAGAAGAACCGGAAATCCTATTCTCCAAGATCCTTTTGAGGTTTTAGGCTCTGATCTATTAATGATTATACTGAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTTGCTTCAAGCGATCGTCTATGGAGTTCGAAGACTCGCATTATGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCAGTATACTGGCGAGATCTTGATCCATATTGGCAAGGAAGCCACCCTCTCATGCGCCGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGTCATGAAAGCTGCTTTTCTACTGTTACAAGTTTTGTTGGTGATGGGGAGATCAGAGAACACTATGTTAGAATAAACAGATGGCCACGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAGGATGTCTAATCACTTCACCTCCTACTCGAGCATAGCCGATCCTGACAAGGCTGGCGGGACAGGTCCACTTTAACAGCAGCTGGTGATCAAATTGCTTGTTTGCTCTTTCTTCTAGAGGCTGCTGTTTTGCTCTTTGTACAGAATTCTTGGGAATATAGTATAGGGAAGGAATTGGTGATAATTTTGGTTGGATCACATGTTTGTTTGGTCCTTTGCCTAAAAATGGGAGTAGCTTCGTATGTTTCTAGGATTTCCTTATTGTTACTGTTAGTTTTTTCCTTGAGAGAATGTATTTAATTAGATGGTTGCTTACTAGCAGGTAGTAAGATTTGAAATTAATAAGTTGAGTTTGTTTTTCTTAAGTTACATATCTGTTAAATGTTATAAAAATAATTAGATAGGAAGTTA

Coding sequence (CDS)

ATGGCGCAAAGCGACTTCCTCGACGGCGGAGCTCGGTGGAAAACTAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCGAGAGACTGTCTCCGATGAACGAGGGCAACAAAATAGAAGAACCGGAAATCCTATTCTCCAAGATCCTTTTGAGGTTTTAGGCTCTGATCTATTAATGATTATACTGAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTTGCTTCAAGCGATCGTCTATGGAGTTCGAAGACTCGCATTATGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCAGTATACTGGCGAGATCTTGATCCATATTGGCAAGGAAGCCACCCTCTCATGCGCCGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGTCATGAAAGCTGCTTTTCTACTGTTACAAGTTTTGTTGGTGATGGGGAGATCAGAGAACACTATGTTAGAATAAACAGATGGCCACGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAGGATGTCTAATCACTTCACCTCCTACTCGAGCATAGCCGATCCTGACAAGGCTGGCGGGACAGGTCCACTTTAA

Protein sequence

MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLLMIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL
Homology
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BLAST of MELO3C006351.2 vs. NCBI nr
Match: XP_008438424.1 (PREDICTED: uncharacterized protein LOC103483521 isoform X2 [Cucumis melo])

HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-112
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120
           MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120

Query: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180
           RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN
Sbjct: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180

Query: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL
Sbjct: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 219

[Close]
BLAST of MELO3C006351.2 vs. NCBI nr
Match: XP_008438422.1 (PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-107
Identity = 219/254 (86.22%), Postives = 219/254 (86.22%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK------------------------- 120
           MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK                         
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 ----------TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
                     TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 220
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]
BLAST of MELO3C006351.2 vs. NCBI nr
Match: XP_004134025.1 (PREDICTED: uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 7.9e-105
Identity = 191/219 (87.21%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFL GGARWK+        XXXXXX        QQN +T NP+LQDPFEVLGSDLL
Sbjct: 1   MAQSDFLGGGARWKS-------RXXXXXXETVSDERGQQNSKTRNPLLQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120
           + ILSYLDARSVALSL VSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW
Sbjct: 61  LAILSYLDARSVALSLPVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120

Query: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180
           RDLDPYWQGSHPLMRRYFHPDG+QTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN
Sbjct: 121 RDLDPYWQGSHPLMRRYFHPDGTQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180

Query: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           RWPRMFVSRNEDWSWRMSNHFTSYSSIADP+K GGTGPL
Sbjct: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPEKTGGTGPL 212

[Close]
BLAST of MELO3C006351.2 vs. NCBI nr
Match: XP_004134023.1 (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus] >KGN56785.1 hypothetical protein Csa_3G133360 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 1.7e-99
Identity = 191/254 (75.20%), Postives = 197/254 (77.56%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFL GGARWK+        XXXXXX        QQN +T NP+LQDPFEVLGSDLL
Sbjct: 1   MAQSDFLGGGARWKS-------RXXXXXXETVSDERGQQNSKTRNPLLQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK------------------------- 120
           + ILSYLDARSVALSL VSRSWYAVASSDRLWSSK                         
Sbjct: 61  LAILSYLDARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 ----------TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
                     TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QT
Sbjct: 121 YSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 220
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]
BLAST of MELO3C006351.2 vs. NCBI nr
Match: XP_022157960.1 (uncharacterized protein LOC111024557 isoform X2 [Momordica charantia])

HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89
Identity = 164/220 (74.55%), Postives = 173/220 (78.64%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           M Q+D L GGA WKT                      +    + N +LQDP +VLG DLL
Sbjct: 26  MVQTDGLGGGAHWKT---------RKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLL 85

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120
           M IL Y+DARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW
Sbjct: 86  MAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 145

Query: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVG-DGEIREHYVRI 180
           RDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFS VTSF G DG+IREHYVRI
Sbjct: 146 RDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIREHYVRI 205

Query: 181 NRWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           NRWPRM VSRNEDWSW++SN   SYSSIAD DK GGTGPL
Sbjct: 206 NRWPRMLVSRNEDWSWKLSNQLASYSSIADADKDGGTGPL 236

[Close]
BLAST of MELO3C006351.2 vs. TrEMBL
Match: tr|A0A1S3AW05|A0A1S3AW05_CUCME (uncharacterized protein LOC103483521 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483521 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 8.9e-113
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120
           MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120

Query: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180
           RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN
Sbjct: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180

Query: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL
Sbjct: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 219

[Close]
BLAST of MELO3C006351.2 vs. TrEMBL
Match: tr|A0A1S3AWZ4|A0A1S3AWZ4_CUCME (uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483521 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.9e-107
Identity = 219/254 (86.22%), Postives = 219/254 (86.22%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK------------------------- 120
           MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK                         
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 ----------TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
                     TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 220
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]
BLAST of MELO3C006351.2 vs. TrEMBL
Match: tr|A0A0A0L471|A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 191/254 (75.20%), Postives = 197/254 (77.56%), Query Frame = 0 

Query: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60
           MAQSDFL GGARWK+        XXXXXX        QQN +T NP+LQDPFEVLGSDLL
Sbjct: 1   MAQSDFLGGGARWKS-------RXXXXXXETVSDERGQQNSKTRNPLLQDPFEVLGSDLL 60

Query: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSK------------------------- 120
           + ILSYLDARSVALSL VSRSWYAVASSDRLWSSK                         
Sbjct: 61  LAILSYLDARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 ----------TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
                     TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QT
Sbjct: 121 YSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 220
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]
BLAST of MELO3C006351.2 vs. TrEMBL
Match: tr|A0A2N9J216|A0A2N9J216_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58365 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.7e-72
Identity = 124/171 (72.51%), Postives = 146/171 (85.38%), Query Frame = 0 

Query: 49  QDPFEVLGSDLLMIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAW 108
           +DP EV G+D+++ ILS LDARSVAL LLVSR+W+AVASSDRLW+ K RIM++DLCDH W
Sbjct: 51  KDPLEVFGTDIMLKILSNLDARSVALCLLVSRAWHAVASSDRLWAPKNRIMKDDLCDHVW 110

Query: 109 QFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVG 168
           +FHFNK AP YWR+LDPYW+G+   MRRYFHPDGSQ+ADP D+VWGGHE C+ TVTS VG
Sbjct: 111 EFHFNKAAPEYWRNLDPYWKGTGRPMRRYFHPDGSQSADPGDKVWGGHECCYLTVTSIVG 170

Query: 169 DGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           +G+IREHYVRINRWPRM VSR +DWSW +SN+  SYSSI D DK GGTGPL
Sbjct: 171 EGKIREHYVRINRWPRMSVSRKQDWSWELSNYLYSYSSIPDADKEGGTGPL 221

[Close]
BLAST of MELO3C006351.2 vs. TrEMBL
Match: tr|A0A2P2KYG2|A0A2P2KYG2_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71
Identity = 125/173 (72.25%), Postives = 141/173 (81.50%), Query Frame = 0 

Query: 47  ILQDPFEVLGSDLLMIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDH 106
           +LQDP EVLG DL+M I S +DARSVALSL+VSRSW+ VA SD LWS K RI R+DLCDH
Sbjct: 83  LLQDPLEVLGRDLMMKIFSNVDARSVALSLVVSRSWHGVACSDSLWSLKNRITRDDLCDH 142

Query: 107 AWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSF 166
            W+FHF K APVYWR+LDPYW+G+ PLMRRYFHPDGS TAD  DRVWGGHE C+S VTSF
Sbjct: 143 VWEFHFTKTAPVYWRNLDPYWKGTGPLMRRYFHPDGSLTADTGDRVWGGHECCYSIVTSF 202

Query: 167 VGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 220
           VG+G+IREHYVR+NRWP+M + R EDWSW MSN    YSSI D  K GGTGPL
Sbjct: 203 VGNGKIREHYVRVNRWPQMTIRRKEDWSWEMSNSIYCYSSIPDAHKEGGTGPL 255

The following BLAST results are available for this feature:
BLAST of MELO3C006351.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438424.11.4e-112100.00PREDICTED: uncharacterized protein LOC103483521 isoform X2 [Cucumis melo][more]
XP_008438422.12.9e-10786.22PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo][more]
XP_004134025.17.9e-10587.21PREDICTED: uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus][more]
XP_004134023.11.7e-9975.20PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus] >KG... [more]
XP_022157960.12.1e-8974.55uncharacterized protein LOC111024557 isoform X2 [Momordica charantia][more]
BLAST of MELO3C006351.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C006351.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C006351.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AW05|A0A1S3AW05_CUCME8.9e-113100.00uncharacterized protein LOC103483521 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3AWZ4|A0A1S3AWZ4_CUCME1.9e-10786.22uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0L471|A0A0A0L471_CUCSA1.1e-9975.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 SV=1[more]
tr|A0A2N9J216|A0A2N9J216_FAGSY7.7e-7272.51Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58365 PE=4 SV=1[more]
tr|A0A2P2KYG2|A0A2P2KYG2_RHIMU8.5e-7172.25Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0008150 biological_process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006090 pyruvate metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0019005 SCF ubiquitin ligase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004462 lactoylglutathione lyase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006351.2.1MELO3C006351.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 39..93
e-value: 4.8E-10
score: 41.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..29
IPR001810F-box domainPFAMPF00646F-boxcoord: 51..94
e-value: 7.1E-7
score: 28.9
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 181..196
coord: 49..129

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006351.2Csa3G133360Cucumber (Chinese Long) v2cumedB223
MELO3C006351.2CSPI03G11330Wild cucumber (PI 183967)cpimedB224
MELO3C006351.2Cucsa.256040Cucumber (Gy14) v1cgymedB432
MELO3C006351.2CmaCh14G018640Cucurbita maxima (Rimu)cmamedB273
MELO3C006351.2CmaCh06G012760Cucurbita maxima (Rimu)cmamedB863
MELO3C006351.2CmoCh06G012850Cucurbita moschata (Rifu)cmomedB857
MELO3C006351.2Lsi05G017950Bottle gourd (USVL1VR-Ls)lsimedB396
MELO3C006351.2Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpemedB951
MELO3C006351.2Cp4.1LG03g18360Cucurbita pepo (Zucchini)cpemedB693
MELO3C006351.2CsGy3G011360Cucumber (Gy14) v2cgybmedB201
MELO3C006351.2Cla021460Watermelon (97103) v1medwmB447
MELO3C006351.2ClCG05G003720Watermelon (Charleston Gray)medwcgB416
MELO3C006351.2Cla97C05G084390Watermelon (97103) v2medwmbB423
MELO3C006351.2Bhi01G000016Wax gourdmedwgoB539
MELO3C006351.2Carg06262Silver-seed gourdcarmedB0947
MELO3C006351.2Carg16519Silver-seed gourdcarmedB0248
MELO3C006351.2CsaV3_3G011440Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006351.2Cucumber (Chinese Long) v3cucmedB140
MELO3C006351.2Cucumber (Chinese Long) v3cucmedB249
MELO3C006351.2Watermelon (97103) v2medwmbB442
MELO3C006351.2Watermelon (97103) v2medwmbB445
MELO3C006351.2Wax gourdmedwgoB515
MELO3C006351.2Wax gourdmedwgoB555
MELO3C006351.2Cucumber (Gy14) v2cgybmedB124
MELO3C006351.2Cucumber (Gy14) v2cgybmedB218
MELO3C006351.2Cucumber (Gy14) v1cgymedB232
MELO3C006351.2Cucurbita maxima (Rimu)cmamedB398
MELO3C006351.2Cucurbita maxima (Rimu)cmamedB559
MELO3C006351.2Cucurbita maxima (Rimu)cmamedB660
MELO3C006351.2Cucurbita maxima (Rimu)cmamedB950
MELO3C006351.2Cucurbita moschata (Rifu)cmomedB260
MELO3C006351.2Cucurbita moschata (Rifu)cmomedB385
MELO3C006351.2Cucurbita moschata (Rifu)cmomedB546
MELO3C006351.2Cucurbita moschata (Rifu)cmomedB648
MELO3C006351.2Cucurbita moschata (Rifu)cmomedB940
MELO3C006351.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C006351.2Cucurbita pepo (Zucchini)cpemedB283
MELO3C006351.2Cucurbita pepo (Zucchini)cpemedB371
MELO3C006351.2Cucurbita pepo (Zucchini)cpemedB834
MELO3C006351.2Wild cucumber (PI 183967)cpimedB137
MELO3C006351.2Wild cucumber (PI 183967)cpimedB242
MELO3C006351.2Cucumber (Chinese Long) v2cumedB137
MELO3C006351.2Cucumber (Chinese Long) v2cumedB244
MELO3C006351.2Melon (DHL92) v3.6.1medmedB144
MELO3C006351.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C006351.2Bottle gourd (USVL1VR-Ls)lsimedB398
MELO3C006351.2Watermelon (Charleston Gray)medwcgB437
MELO3C006351.2Watermelon (Charleston Gray)medwcgB439
MELO3C006351.2Watermelon (97103) v1medwmB445
MELO3C006351.2Watermelon (97103) v1medwmB474
MELO3C006351.2Silver-seed gourdcarmedB0243
MELO3C006351.2Silver-seed gourdcarmedB1064