Carg06262 (gene) Silver-seed gourd

Overview
NameCarg06262
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box domain containing protein
LocationCucurbita_argyrosperma_scaffold_016 : 556887 .. 559934 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTACTCTACGTTAATCGCCGAGCGTTCATCCTCTTCCAAATTCTTCTCCTTTGATCCTTTCTTTGTCTCTCCAGCTTTGAATTCATGGCGCATAGCGGCTTACTCGGAGGCGGAATGCGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAGTGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGGTGTGCATCTTTACTCTCATTAATTCGTTGATCTTATGGTGCTTTTGATTTTGTTCGATTCTCTGGAATTGGATTTTGTATTTGATTTTTTCATTGGTCTTAGTAATTCCAGTGCTAATCGAGTCGATTCGCTCGTTTTTGCTTATAGAAATACGTTCATCTGTTGTAGAATGGGGTTTTGGAATCCTATGACTTCCATTCTTTTGTGTAATATTTTCTCACATCGGGATTTGAATCTTAAATTTATGAACTGTCTCTTTTCTACTTTGATGGATCATCACGAACTGCATATAAGAAGTGCTTTCACTCCAAACCACTTTGTACAAAAGCCATTATTAGGTACTGAATCTTGTCGTCATAAGATCCTTTAGAGAAATACTGAAACGGCCCAAGCCCATCGCTAACAGATATTGCCAGCTACTTTTCCTATCATACTTCCCTTCAAGCTTTTTAAAACACGTATGCTAGGGAGAGATTTCCACACCCTTATAAAAAAAAATGTTTGTTCTCCTCCCAAACCAATGTGGGATCTCACAATCCACCCTCTCGTCCTCGCTAGTACTCGTTCTCTTCTCCAATCGATGTGGGACCCCTAATTCACCCCCTTTGGGGCCCAGCGTCCTTGCTGGCACACTGCTGTCCACTCCCTTCGGGGCTCAACCTCCTCGCTGGCACATCACTCGGTGTCTAGCTTTGATACCATTTGTAACAGCCCAAACCTGTTAACCGTAAATTTATGTGACTTTGCAAAGATACCAAAAATGATCATTTGTTATTGATAGGGTCCAATGCTTTTTATAGAAAAAATACATAAAAACTAATAACAAGAAAACTAACTGACAAACTCAACTAATAACAAGAAAAACTAACTAATAGAAATTTGCTACCTCAACAAAACCCACCGTTAGATATTGTCCTCTTTGGATTTTCTCTTTCAGGCTTCCCCTCAAGATTTTTAAAACGTGTCTGCTAGGGGGAGGTTTCCATGCTATTATAAAGAACGTTTCATTCTCCTCCCTAACTGACATGGGATCTCACACCATTCATGGTTATGCATAAGCATAAGGGATTGCAATGACTGCTTGCCATGTCTTATCTTATTTGACACTGGGATAGATGATACAAAATTCTACAAACTTGTTAAAATGGTGTAGCAAACAAAAAAAAAAAACTTGCATTTCACTGTATAATTGAACATTTGGTAAACAATTTTATCGTGATTTCTCTTAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTATTCATTATCTGTCATGGATGGCAATCGGGTTAGTCTCTCTCTCCATCCCTCCACCCCCAACATATATGTATATATACGTTCTTTATGTATGATTCTGTGATCCCACATGCATCTACTGCTTGTCATCAATGATTCGAAAAAAGAATATGGTCTACTTCTACACATATACTCCCAACACATGGGAGAATGAGGAGCGGGTATTACTTGGCTATCGTTTTTTATAGGTTTATATTGTTGTGTCAGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGTATGGCTGTCTTTTATTTTAGGACATTAACCTTCATGTAATGAACTAAATGACGTGCAACCTGGTTAGGAGACATACATTGAAGTCCTAAATTAACTGTATGAAATTCTGTTACATGATGATTGTGTTTTATGATTGATCAAATCTGGTTATGTTATAAACATCATTTGACCACTTCTAAGCATTTTACAGAGATTCATGCTGTCTACATCTAATATTTTTTCCTTTTATTAGTTGCACATAAACTATTTATTCCCATCTGGAAATTTGAAAATGTAACAGCGCACACGATTAGCTGCAAGAGAGGTTAGATGCCCGATGATGGATGTTTTAGTAATACAAATTTCATGAACGATGTTCACAATTTGAGAGCCATGCTAGTGATTATGTTATAAATCATCTAACATGCACAAAAAGCTCGTTGGACTTGGAAGCCCATGAAGCATGGGTACTTTAGTTTAGGCAATGTGTCTGTGTCTGACATGTGCCACCACATCCGTGTTGTGTCGTGTTCGTGAATTACTTGCTCTCGGAATGTCTATGTTGATGCTCACAGTTCTGATAGCACGGTGAGGTAAAGGGGATGTCTCGGTAAGTGTTTAGCACCTAAATTCATTTTTACAAATGCAATTGTGTGTGGTTAAAAACATATCATGCTCTAGCTGGTTTCAAAACAATCTACCAATTTTGTGCTTGCATGCCAATGTATCTCATTAAGGAACCTTTCTGATGGGGTAAGTTGGTTCATAATGGCAGATAAATTAATTTCCATTCCTCTCAGGAAGCTCCTGTTTACTGGCGAGATCTTGATCCGTATTGGCAAGGTAGCCACCTTCTCATGCGCCGTTATTTCCACCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACTGTAACCACCATTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAAATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACTTCGTACTCGAGCATAGCTGATGCTGAGAAGGACGGTGGGACAGGGCCACTTTAA

mRNA sequence

AAATTACTCTACGTTAATCGCCGAGCGTTCATCCTCTTCCAAATTCTTCTCCTTTGATCCTTTCTTTGTCTCTCCAGCTTTGAATTCATGGCGCATAGCGGCTTACTCGGAGGCGGAATGCGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAGTGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTATTCATTATCTGTCATGGATGGCAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTTTACTGGCGAGATCTTGATCCGTATTGGCAAGGTAGCCACCTTCTCATGCGCCGTTATTTCCACCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACTGTAACCACCATTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAAATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACTTCGTACTCGAGCATAGCTGATGCTGAGAAGGACGGTGGGACAGGGCCACTTTAA

Coding sequence (CDS)

ATGGCGCATAGCGGCTTACTCGGAGGCGGAATGCGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAGTGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTATTCATTATCTGTCATGGATGGCAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTTTACTGGCGAGATCTTGATCCGTATTGGCAAGGTAGCCACCTTCTCATGCGCCGTTATTTCCACCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACTGTAACCACCATTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAAATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACTTCGTACTCGAGCATAGCTGATGCTGAGAAGGACGGTGGGACAGGGCCACTTTAA

Protein sequence

MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
Homology
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BLAST of Carg06262 vs. NCBI nr
Match: XP_023539867.1 (uncharacterized protein LOC111800413 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.8 bits (1301), Expect = 8.5e-140
Identity = 237/244 (97.13%), Postives = 242/244 (99.18%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSR 60
           MAHSGLLGGG+RWKTRKKMRENVSDERGQQNGTL+VLLQDPFEVLGSDLLMAILGYVDSR
Sbjct: 1   MAHSGLLGGGIRWKTRKKMRENVSDERGQQNGTLNVLLQDPFEVLGSDLLMAILGYVDSR 60

Query: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120
           SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR
Sbjct: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120

Query: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG 180
           TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLM RYFH DG+QTADPDDRVWGG
Sbjct: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGG 180

Query: 181 HECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGG 240
           HECCFSTVTTI+GDGKIREHYVRIN+WPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGG
Sbjct: 181 HECCFSTVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGG 240

Query: 241 TGPL 245
           TGPL
Sbjct: 241 TGPL 244

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BLAST of Carg06262 vs. NCBI nr
Match: XP_022974484.1 (uncharacterized protein LOC111473162 [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 7.4e-136
Identity = 233/244 (95.49%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSR 60
           MAH GLLG  +RWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLL+AILGYVDSR
Sbjct: 1   MAHCGLLGAEIRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLLAILGYVDSR 60

Query: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120
           SVALSLLVSRSWY IASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR
Sbjct: 61  SVALSLLVSRSWYRIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120

Query: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG 180
           TRIMREDLCDHAW+FHFNKEAPVYWRDLDPYWQGSH LMRRYFH DGSQTADPDDRVWGG
Sbjct: 121 TRIMREDLCDHAWKFHFNKEAPVYWRDLDPYWQGSHHLMRRYFHLDGSQTADPDDRVWGG 180

Query: 181 HECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGG 240
           HECCFSTVTTIV DGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSI DAEKDGG
Sbjct: 181 HECCFSTVTTIVSDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIPDAEKDGG 240

Query: 241 TGPL 245
           TGPL
Sbjct: 241 TGPL 244

[Close]
BLAST of Carg06262 vs. NCBI nr
Match: XP_022944409.1 (uncharacterized protein LOC111448835 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 3.7e-119
Identity = 204/209 (97.61%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSR 60
           MAHSGLLGGG+RWKTRKKMRENVSDERGQQNGTL+VLLQDPFEVLGSDLLMAILGYVDSR
Sbjct: 1   MAHSGLLGGGIRWKTRKKMRENVSDERGQQNGTLTVLLQDPFEVLGSDLLMAILGYVDSR 60

Query: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120
           SVALSLLVSRSWYGIASSDSLWSSKCVELWLG AHIPRLAQTRGLPKMAAYSLSVMDGNR
Sbjct: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGIAHIPRLAQTRGLPKMAAYSLSVMDGNR 120

Query: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG 180
           TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG
Sbjct: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG 180

Query: 181 HECCFSTVTTIVGDGKIREHYVRINKWPR 210
           HECCFSTVTT+VGDGKIREHYVRINKWP+
Sbjct: 181 HECCFSTVTTVVGDGKIREHYVRINKWPK 209

[Close]
BLAST of Carg06262 vs. NCBI nr
Match: XP_004134023.1 (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus] >KGN56785.1 hypothetical protein Csa_3G133360 [Cucumis sativus])

HSP 1 Score: 436.8 bits (1122), Expect = 4.8e-119
Identity = 207/247 (83.81%), Postives = 220/247 (89.07%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTR--KKMRENVSDERGQQNG-TLSVLLQDPFEVLGSDLLMAILGYV 60
           MA S  LGGG RWK+R      E VSDERGQQN  T + LLQDPFEVLGSDLL+AIL Y+
Sbjct: 1   MAQSDFLGGGARWKSRXXXXXXETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMD 120
           D+RSVALSL VSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRV 180
           G RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEK 240
           WGGHE CFSTVT+ VGDG+IREHYVRIN+WPRM VSRNEDWSW MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 DGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]
BLAST of Carg06262 vs. NCBI nr
Match: XP_022157958.1 (uncharacterized protein LOC111024557 isoform X1 [Momordica charantia])

HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-116
Identity = 203/246 (82.52%), Postives = 218/246 (88.62%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTRKKMR-ENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDS 60
           M  +  LGGG  WKTRKK + ENVSDER  +NG+ +VLLQDP +VLG DLLMAILGYVD+
Sbjct: 26  MVQTDGLGGGAHWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDA 85

Query: 61  RSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGN 120
           RSVALSLLVSRSWY +ASSD LWSSKCVELWLGKAHIPRLA  +GLP +AAYSLSVMDG 
Sbjct: 86  RSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRLAYIQGLPYLAAYSLSVMDGK 145

Query: 121 RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWG 180
           RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWG
Sbjct: 146 RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWG 205

Query: 181 GHECCFSTVTTIVG-DGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKD 240
           GHECCFS VT+  G DGKIREHYVRIN+WPRMLVSRNEDWSW++SN   SYSSIADA+KD
Sbjct: 206 GHECCFSVVTSFAGDDGKIREHYVRINRWPRMLVSRNEDWSWKLSNQLASYSSIADADKD 265

Query: 241 GGTGPL 245
           GGTGPL
Sbjct: 266 GGTGPL 271

[Close]
BLAST of Carg06262 vs. TrEMBL
Match: tr|A0A0A0L471|A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.2e-119
Identity = 207/247 (83.81%), Postives = 220/247 (89.07%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTR--KKMRENVSDERGQQNG-TLSVLLQDPFEVLGSDLLMAILGYV 60
           MA S  LGGG RWK+R      E VSDERGQQN  T + LLQDPFEVLGSDLL+AIL Y+
Sbjct: 1   MAQSDFLGGGARWKSRXXXXXXETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMD 120
           D+RSVALSL VSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRV 180
           G RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEK 240
           WGGHE CFSTVT+ VGDG+IREHYVRIN+WPRM VSRNEDWSW MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 DGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]
BLAST of Carg06262 vs. TrEMBL
Match: tr|A0A1S3AWZ4|A0A1S3AWZ4_CUCME (uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483521 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.9e-112
Identity = 196/254 (77.17%), Postives = 209/254 (82.28%), Query Frame = 0 

Query: 1   MAHSGLLGGGMRWKTRKKMRENVSDERG----------QQNGTLSVLLQDPFEVLGSDLL 60
           MA S  L GG RWKT                       Q   T + +LQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTXXXXXXXXXXXXXXXXXXXXXXQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAA 120
           M IL Y+D+RSVALSLLVSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AA
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 YSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQT 180
           YSLS+MDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYS 240
           ADPDDRVWGGHE CFSTVT+ VGDG+IREHYVRIN+WPRM VSRNEDWSW MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

Query: 241 SIADAEKDGGTGPL 245
           SIAD +K GGTGPL
Sbjct: 241 SIADPDKAGGTGPL 254

[Close]
BLAST of Carg06262 vs. TrEMBL
Match: tr|A0A1R3KQ13|A0A1R3KQ13_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_05738 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-91
Identity = 151/206 (73.30%), Postives = 177/206 (85.92%), Query Frame = 0 

Query: 39  QDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPR 98
           +DP EV G D++M IL  +D+RSVALSLLVSR+W+G+ASSDSLWSSKC ELW GKAHIPR
Sbjct: 13  RDPLEVFGRDIMMKILSNLDARSVALSLLVSRAWHGVASSDSLWSSKCEELWHGKAHIPR 72

Query: 99  LAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLL 158
            +Q RGL K+AAYS+SVMDG R RIM++DLCDH W+FHFNK AP YWR+LDPYW+G+  L
Sbjct: 73  ASQVRGLSKLAAYSISVMDGKRARIMKDDLCDHVWEFHFNKAAPEYWRNLDPYWKGTSPL 132

Query: 159 MRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDW 218
           MRRYFHPDGSQTADP D+VWGGHECC+S VT+I+G+GKIR HYVRIN+WP+M VSRN DW
Sbjct: 133 MRRYFHPDGSQTADPGDKVWGGHECCYSIVTSIIGEGKIRSHYVRINRWPQMFVSRNRDW 192

Query: 219 SWEMSNHFTSYSSIADAEKDGGTGPL 245
           SWEMSN    YSS+ DA+K GGTGPL
Sbjct: 193 SWEMSNCLYCYSSVPDADKIGGTGPL 218

[Close]
BLAST of Carg06262 vs. TrEMBL
Match: tr|A0A061EM39|A0A061EM39_THECC (F-box family protein OS=Theobroma cacao OX=3641 GN=TCM_020443 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.8e-91
Identity = 150/206 (72.82%), Postives = 178/206 (86.41%), Query Frame = 0 

Query: 39  QDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPR 98
           +DP EV G D+++ IL  +D+RSVALSLLVSR+W+G+ASSD LWSSKC ELW GKAHIPR
Sbjct: 48  RDPLEVFGRDIMVMILSNLDARSVALSLLVSRAWHGVASSDRLWSSKCEELWHGKAHIPR 107

Query: 99  LAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLL 158
            +Q RGL K+AAYS+SVMDG RTRIM++DLCDH W+FHFNK AP YWR+LDPYW+G+  L
Sbjct: 108 ASQARGLSKLAAYSISVMDGKRTRIMKDDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPL 167

Query: 159 MRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDW 218
           MRRYFHPDGSQTADP D+VWGGHECC+S VT++VG+GKIR HYVRIN+WPRM VSRN+DW
Sbjct: 168 MRRYFHPDGSQTADPGDKVWGGHECCYSVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDW 227

Query: 219 SWEMSNHFTSYSSIADAEKDGGTGPL 245
           SWEMSN    Y+S+ DA+K GGTGPL
Sbjct: 228 SWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]
BLAST of Carg06262 vs. TrEMBL
Match: tr|A0A2I4H2B9|A0A2I4H2B9_9ROSI (uncharacterized protein LOC109012869 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012869 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 6.3e-91
Identity = 151/208 (72.60%), Postives = 177/208 (85.10%), Query Frame = 0 

Query: 36  VLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAH 95
           VL +DP EV G+D+++ IL  +D+RSVALSL+VSR WYG+ASSD +WS K  ELWLGKAH
Sbjct: 55  VLRRDPLEVFGTDIMLMILSNLDARSVALSLVVSRGWYGVASSDRIWSPKLEELWLGKAH 114

Query: 96  IPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGS 155
           IPRL Q RGL K+ AYSL+VMDG R RIM++DLCDHAW+FHFNK AP YWR+LDPYW+G+
Sbjct: 115 IPRLMQIRGLSKLVAYSLAVMDGKRNRIMKDDLCDHAWEFHFNKGAPEYWRNLDPYWKGT 174

Query: 156 HLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRN 215
              MRRYFHPDGSQ+ADPDD+VWGGHECC+ TVT+I G+GKIREHYVRIN+WPRM VSR 
Sbjct: 175 GPPMRRYFHPDGSQSADPDDKVWGGHECCYLTVTSIAGEGKIREHYVRINRWPRMSVSRK 234

Query: 216 EDWSWEMSNHFTSYSSIADAEKDGGTGP 244
            DWSWE+SNH  SYSSI DA K+GGTGP
Sbjct: 235 HDWSWELSNHLYSYSSIPDANKEGGTGP 262

The following BLAST results are available for this feature:
BLAST of Carg06262 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023539867.18.5e-14097.13uncharacterized protein LOC111800413 [Cucurbita pepo subsp. pepo][more]
XP_022974484.17.4e-13695.49uncharacterized protein LOC111473162 [Cucurbita maxima][more]
XP_022944409.13.7e-11997.61uncharacterized protein LOC111448835 [Cucurbita moschata][more]
XP_004134023.14.8e-11983.81PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus] >KG... [more]
XP_022157958.11.0e-11682.52uncharacterized protein LOC111024557 isoform X1 [Momordica charantia][more]
BLAST of Carg06262 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg06262 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg06262 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L471|A0A0A0L471_CUCSA3.2e-11983.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 SV=1[more]
tr|A0A1S3AWZ4|A0A1S3AWZ4_CUCME4.9e-11277.17uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1R3KQ13|A0A1R3KQ13_9ROSI2.2e-9173.30Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_05738 PE=4 SV=1[more]
tr|A0A061EM39|A0A061EM39_THECC2.8e-9172.82F-box family protein OS=Theobroma cacao OX=3641 GN=TCM_020443 PE=4 SV=1[more]
tr|A0A2I4H2B9|A0A2I4H2B9_9ROSI6.3e-9172.60uncharacterized protein LOC109012869 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06262-RACarg06262-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 33..162
e-value: 8.6E-9
score: 37.2
IPR001810F-box domainPFAMPF12937F-box-likecoord: 48..86
e-value: 1.1E-5
score: 25.1
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 39..93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06262Cla021460Watermelon (97103) v1carwmB0961
Carg06262Csa3G133360Cucumber (Chinese Long) v2carcuB0975
Carg06262ClCG05G003720Watermelon (Charleston Gray)carwcgB0935
Carg06262CSPI03G11330Wild cucumber (PI 183967)carcpiB0998
Carg06262Cucsa.256040Cucumber (Gy14) v1carcgyB1077
Carg06262CmaCh06G012760Cucurbita maxima (Rimu)carcmaB1325
Carg06262CmaCh14G018640Cucurbita maxima (Rimu)carcmaB1320
Carg06262CmoCh14G019080Cucurbita moschata (Rifu)carcmoB1284
Carg06262Lsi05G017950Bottle gourd (USVL1VR-Ls)carlsiB878
Carg06262Cp4.1LG08g03070Cucurbita pepo (Zucchini)carcpeB1333
Carg06262Cp4.1LG03g18360Cucurbita pepo (Zucchini)carcpeB1331
Carg06262CsGy3G011360Cucumber (Gy14) v2carcgybB0948
Carg06262MELO3C006351.2Melon (DHL92) v3.6.1carmedB0947
Carg06262CsaV3_3G011440Cucumber (Chinese Long) v3carcucB1003
Carg06262Cla97C05G084390Watermelon (97103) v2carwmbB1008
Carg06262Bhi01G000016Wax gourdcarwgoB1122
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06262Carg16519Silver-seed gourdcarcarB274
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06262Silver-seed gourdcarcarB266
Carg06262Silver-seed gourdcarcarB610
Carg06262Silver-seed gourdcarcarB649
Carg06262Cucumber (Gy14) v2carcgybB0945
Carg06262Cucumber (Gy14) v2carcgybB0947
Carg06262Cucurbita maxima (Rimu)carcmaB1321
Carg06262Cucurbita maxima (Rimu)carcmaB1322
Carg06262Cucurbita maxima (Rimu)carcmaB1323
Carg06262Cucurbita maxima (Rimu)carcmaB1327
Carg06262Cucurbita moschata (Rifu)carcmoB1285
Carg06262Cucurbita moschata (Rifu)carcmoB1287
Carg06262Cucurbita moschata (Rifu)carcmoB1288
Carg06262Cucurbita moschata (Rifu)carcmoB1289
Carg06262Cucurbita pepo (Zucchini)carcpeB1328
Carg06262Cucurbita pepo (Zucchini)carcpeB1329
Carg06262Cucurbita pepo (Zucchini)carcpeB1330
Carg06262Cucurbita pepo (Zucchini)carcpeB1332
Carg06262Wild cucumber (PI 183967)carcpiB0997
Carg06262Wild cucumber (PI 183967)carcpiB0995
Carg06262Cucumber (Chinese Long) v2carcuB0974
Carg06262Cucumber (Chinese Long) v3carcucB1001
Carg06262Cucumber (Chinese Long) v3carcucB1002
Carg06262Bottle gourd (USVL1VR-Ls)carlsiB876
Carg06262Bottle gourd (USVL1VR-Ls)carlsiB879
Carg06262Melon (DHL92) v3.5.1carmeB0939
Carg06262Melon (DHL92) v3.5.1carmeB0941
Carg06262Melon (DHL92) v3.6.1carmedB0945
Carg06262Watermelon (Charleston Gray)carwcgB0936
Carg06262Watermelon (Charleston Gray)carwcgB0938
Carg06262Watermelon (97103) v1carwmB0962
Carg06262Watermelon (97103) v2carwmbB1009
Carg06262Watermelon (97103) v2carwmbB1011
Carg06262Wax gourdcarwgoB1114
Carg06262Wax gourdcarwgoB1123