Cp4.1LG08g03070 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g03070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionF-box domain containing protein
LocationCp4.1LG08 : 2310601 .. 2315747 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGCGAAAAGTGGCATAAAAATTAAAATTGCAATTTAATTTTTATTAATTGAGCAAGAAATTGAACAAAAAACTGATCAAAACATCTTCACGTTAATCGGCGAGCGTTCATCCTCTTCAAAACCCTTCTCCTTCAATCCTATCTGTCTCTCCAGCTTTGAATTCATGGCGCATAGCGGCTTACTCGGAGGCGGAATACGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAATGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGGTGTGCATCTTTACTCTCATTAATTCGTTGATCTTATGGTGCTTTTGATTTTGTTCGATTCTCTGGAATTGGATTTTGTATTTGATTTTTTTCTTTGGTCTTAGTAATTCCAGTGCTAATCGAGTCGATTCGCTCGTTTTTTGCTTATAGAAATACGTTCATCTGTTGTAGAATGGGGTTCTGGAATCCTATGATTTTCATTCTTTTGTGTAATCTTTTCTCACATTGGGATTTGAATCTTAAATTTATGAACTCTGTTTCTGCTGAGTTGAGCCTTTTCTACTTCGATGGATCATCACGAACTGCATATAAGAAGTGCTTTCACTCCAAACCACTTTGTACAAAAGCCATTATTAGGTACTGAATCCTGTCGTCATAAGATACTTCAGAGAAATACTGAAACGGCCCAAGCCCACCGATAACAGATATTGTCAGCTACTTTTCCTTTCATACTTCCCCTCAAGCTTTTTAAAACACGTATGCTAGGGAGGGATTTTCACACCCTTATAAAAAAAAATGTTTGTTCTCCTCCCAAACCAACGTGGGATCTCACAATCCACCCTCTCGTCCTGGCTGGTACTCATTCCCTTCTCCAATCGATGTGGGACCCTTCAATCCACTCTCTTCGGGGCCCAGCATCCTTGCTGCCACACCGCCTCGTGTCTACCCCCTTCGGGGCTCAACCTCCTCGGTTGCACATCACCCGGTGTCTGGTTCTGATACCATTTGTAACAGTCGAAACCCACGGCTAGTATTGTTCACTTTGGATTTTCCCTTTCAGGCTTCTCCTCAAGATTTTTAATACGTGCCTGCTAGGGAGAGATTTCCACACGCTTATAAAGAATGTTTCATTCTCCTCCCCAACCGATGTGGGATCTCACACCATCCATGGTTATGTATAAGGGATTGTAATGACTGCTTGCCATGTCTTATCTTATTTGACACTGGGATATGATGATAAAAATTTCTACAAATTTGTTAAAATGGTGTAGCAACAAAAAAAAATCTTGCATTCTTCACTGTATAATTTAACATTTGGTCAACAAGTTTATGATGTTTTCTCTTAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTACTCGTTATCTGTCATGGATGGCAATCGGGTTAGTCTCTCTCTCCATCCCTCCACCCCCAACATATATGTATATATACGTTCTTTATGTATAATTGTGTGATCCCACGTGCATCTACTGCTTGTCATCAATGATTCGAAAAAAGAATATGGTCTACTTCTACACATATACTCCCAACACATGGGAGAATGAGGAGCGGGTATTACTTGGCTATCGTTTTTTATGGGTTTAAATTGTTGTGTCAGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGTATGGCTGTCTTTTATTTTTGGACGTTAACCTTCATGTAATGAACTAAATGACGTGCAACCTGGTTAGGAGACATACATTGAAGTCCTAAATTAACTGTATGAAATTCTGTTACATATGATTGTGTTTTATGATTGATCAAATCTGATTATGTTATAAACATCATTTGACCGCTTTTAAGCATTTTACAGAGATTCATGCTGTCTACATCTAATCTTTTTTCCTTTTATTAGTTGCACATAAACTATTTATTCCCATCTGGAAATTTGAAAATGTAACAGCGCACACGATTAGCTGCAAGAGAGGTTAGATGCCCGATGATGGATGTTAGTAGTACAAATTTCATGAACGATGTTCACAATTTGAGAGCCATGCTTGTGATTATGTTATAAATCATCTAACATGCACAAAAAGCTCGTTGGACTTGGAAGCCCGTGAAGCATGGGTACTTTAGTTTAGGCGATGTGTCTGTGTCTGATATGTGCCACCACATCCGTGTCGTGTCGTGTTCGTGACTTGCTCTCGGAATGTCTATGTTGATGCTCACAATTCTGATAGCACGTTGAGGTAAAGGGGATGTCTCGGTAAGTGTTTAGTGCCTAAATTCATTTTTACAAATGCAATTGCGTGTGGTTAAAAACATATCATGCTCTAGCTGGTTTCAAAACAATCTACCAATTTTGTGCTTGCATGCCAATGTATCTCAAGTTAATGTACCGCTGACCAGAGTTTCCACATCCATATCATTAAGGAACCTTTATGATGAATTGAGTTCCATTCCTCTCAGGAAGCTCCTGTATACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCTTCTCATGTGTCGTTACTTCCATCTCGATGGGAACCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACAGTAACCACCATTATTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCTGATGCTGAGAAGGATGGTGGGACAGGGCCACTTTGATGTATAACATATGTGATTAGTTCCCTGCTTGAATTTTGTCTTCTGGTAAGACATTAGCCTGGCGAATGCTTGTTTGCTCTTTCTTGTAGAGGCTGCTGTTTTGCTGTGTACAGAAGTTTGGGAGTCATAGGATTTTGTGTGTTTGTAGATAATGCTTGCAAGTAGTAGGGTTTGTAATTAATAAGTTTTCATATTTTAGGAGTGATTTTCATTTCGGACCGTTTTTTTACTTCTAATGATTTGAACTTCCGACCTTAAAAGGAGGGAGAACATGCTACTAGGTTATATATTTGATTCCTAGGGTATAGCTCTTTAATACATTCTTTTTCACAATTGTCTAAGATTAATATTGAACATCCACTTAGTCCATATGGTTTTTTTTTTAAGAATACATGTTTCTAATTTACATCGTAAATTAATCAAAAGTTTGGGACATGATATATATATATCTAAATTATCTAAAAAATATTAGGACGAATCAAATATTCAAATTTTCTACCTCAAGTATCGTTAAATCAAGAAAAAAACACAAAATTTATAAATCTACCATTTATTGATGGATAAGATTTATAAATTGATACCAATCTGAACGTTAGCTCAAAGTACATACATAAACTATAGTACACGAGCACAAGAACCTTCTTGTGGAGTAGATTGTAGTTAAGCAACCCCATTTTACCCTGCAACGGAAGGGCCTTGCTCACATCGGATGAAACTTCACTTCTTCCCTCGAAATTTTTTTCGAAATAGGGATTAAATTGTTAAATATTTTTCTAACTTCACAAAACACATAACACATATAAGGTCAATTTATTTCTTGCATGGGTAAAGATTCACTTAACATAATTAATTGAACTCCAAATAACTTTATTTGGCAAACTAATGTACAACAAAAATGAACAGCACAAAAGTGTCAAAATTTGACACTTCATGTCTCCTCTTAACAAACATCCAAAGACGCCTAAGCATCTCTGTTTTTATCCCCAACCATGCAGCAAATCAAATCAGTGTGTTTTACAATGAAAAACAGTGTCATATTTTCTGTATCTTCAAATGGTTTTAAGGCCCACTTCAAATCCTCATGAGTTGACACTTTCTTGAAGAAACTTGATCAACTTCCCAGGATGAGAAGGGGCCTCAAACGATTTGGAGTTACTGCCATAGATTCTACAATTTCAAAACTTTTGTAGCCACTAAAAAACCAGCATTAAAGCAAAAACAGTATTTACAAGGATTGGAATTGCAAGTAATTTATGGACTAGCTGAGCAGGATATTCTGCAGTTACATTTGACTTTAATGTATTTCATATAAAATAAGGCAGCACACTGTTGATCTGATACCTGTATTATCTTCCTTTTCGGCGACCTTTCGAGCCCGCGCAATCTGAACAGTACCATTTTCCTTTCGGTTGTTCTTTTAGACCAACACAGCCAAAATGAAACCATTCGATCTTGCACTGTATGAATGGGAAGACTGGCTTAGATTATAGACTCAAACCACAAAAAAAAAAAAGAAATGTAAGTAGAGGGGGAAAGGGTTGTCACATACATTAGGGTTATCACAGGCAACCATCTCCCCGTAACTAACTTGGTTGCAGAGGCAGTAAGTTGGTTCGTTTGGATCAACCGGTAATTCGAGTTCCATTCCTGTGGGAGTTGCAGCAGTTGATGCTTCTGTTGCAGCAGCTGCAGCCGCAGTCTGGCCATGCCGGGTTCTGTACAAAATAATTTTCGTCACAGATGATGTCCTATAACTCTTGCCCAACATGCATAAAATAAATGTCTTTGTAGTATATACTACTATTCCCAATTCATCATAAACAGTAATGTAATTATGTAACCTAAAGTAAATGGTGTCTTATATCAGTAGATAATTTCAACATTAATCATGTAGGAGATGATCTTACTTTTTACGCCCTCCTCTACCACCTTCTGTTCCCCGTCCAGATTTTGTACCACCATCCATACTAGAAGCTGGTAACCCACTTGCAGCAGCACTCCCCCTTTCTGCAAATAACCATGATATAAAAGATGGGAGTTGGATCCAAAATGAAAAAGATAAATGTATTTATGCTCCATATTCACTGGAGCATAGAGGATATCAAAGGTGGAATCGCATGCACTACCATGACGAAGCTTTTCATCAAAATTCTTCAAATACTGGTCAAGCTGTTGTAT

mRNA sequence

GGCGCGAAAAGTGGCATAAAAATTAAAATTGCAATTTAATTTTTATTAATTGAGCAAGAAATTGAACAAAAAACTGATCAAAACATCTTCACGTTAATCGGCGAGCGTTCATCCTCTTCAAAACCCTTCTCCTTCAATCCTATCTGTCTCTCCAGCTTTGAATTCATGGCGCATAGCGGCTTACTCGGAGGCGGAATACGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAATGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTACTCGTTATCTGTCATGGATGGCAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTATACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCTTCTCATGTGTCGTTACTTCCATCTCGATGGGAACCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACAGTAACCACCATTATTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCTGATGCTGAGAAGGATGGTGGGACAGGGCCACTTTGATGTATAACATATGTGATTAGTTCCCTGCTTGAATTTTGTCTTCTGGTAAGACATTAGCCTGGCGAATGCTTGTTTGCTCTTTCTTGTAGAGGCTGCTGTTTTGCTGTGTACAGAAGTTTGGGAGTCATAGGATTTTGTGTGTTTGTAGATAATGCTTGCAAGTAGTAGGGTTTGTAATTAATAAGTTTTCATATTTTAGGAGTGATTTTCATTTCGGACCGTTTTTTTACTTCTAATGATTTGAACTTCCGACCTTAAAAGGAGGGAGAACATGCTACTAGGTTATATATTTGATTCCTAGGGTATAGCTCTTTAATACATTCTTTTTCACAATTGTCTAAGATTAATATTGAACATCCACTTAGTCCATATGGTTTTTTTTTTAAGAATACATGTTTCTAATTTACATCGTAAATTAATCAAAAGTTTGGGACATGATATATATATATCTAAATTATCTAAAAAATATTAGGACGAATCAAATATTCAAATTTTCTACCTCAAGTATCGTTAAATCAAGAAAAAAACACAAAATTTATAAATCTACCATTTATTGATGGATAAGATTTATAAATTGATACCAATCTGAACGTTAGCTCAAAGTACATACATAAACTATAGTACACGAGCACAAGAACCTTCTTGTGGAGTAGATTGTAGTTAAGCAACCCCATTTTACCCTGCAACGGAAGGGCCTTGCTCACATCGGATGAAACTTCACTTCTTCCCTCGAAATTTTTTTCGAAATAGGGATTAAATTGTTAAATATTTTTCTAACTTCACAAAACACATAACACATATAAGGTCAATTTATTTCTTGCATGGGTAAAGATTCACTTAACATAATTAATTGAACTCCAAATAACTTTATTTGGCAAACTAATGTACAACAAAAATGAACAGCACAAAAGTGTCAAAATTTGACACTTCATGTCTCCTCTTAACAAACATCCAAAGACGCCTAAGCATCTCTGTTTTTATCCCCAACCATGCAGCAAATCAAATCAGTGTGTTTTACAATGAAAAACAGTGTCATATTTTCTGTATCTTCAAATGGTTTTAAGGCCCACTTCAAATCCTCATGAGTTGACACTTTCTTGAAGAAACTTGATCAACTTCCCAGGATGAGAAGGGGCCTCAAACGATTTGGAGTTACTGCCATAGATTCTACAATTTCAAAACTTTTGTAGCCACTAAAAAACCAGCATTAAAGCAAAAACAGTATTTACAAGGATTGGAATTGCAAGTAATTTATGGACTAGCTGAGCAGGATATTCTGCAGTTACATTTGACTTTAATGTATTTCATATAAAATAAGGCAGCACACTGTTGATCTGATACCTGTATTATCTTCCTTTTCGGCGACCTTTCGAGCCCGCGCAATCTGAACAGTACCATTTTCCTTTCGGTTGTTCTTTTAGACCAACACAGCCAAAATGAAACCATTCGATCTTGCACTGTATGAATGGGAAGACTGGCTTAGATTATAGACTCAAACCACAAAAAAAAAAAAGAAATGTAAGTAGAGGGGGAAAGGGTTGTCACATACATTAGGGTTATCACAGGCAACCATCTCCCCGTAACTAACTTGGTTGCAGAGGCAGTAAGTTGGTTCGTTTGGATCAACCGGTAATTCGAGTTCCATTCCTGTGGGAGTTGCAGCAGTTGATGCTTCTGTTGCAGCAGCTGCAGCCGCAGTCTGGCCATGCCGGGTTCTGTACAAAATAATTTTCGTCACAGATGATGTCCTATAACTCTTGCCCAACATGCATAAAATAAATGTCTTTGTAGTATATACTACTATTCCCAATTCATCATAAACAGTAATGTAATTATGTAACCTAAAGTAAATGGTGTCTTATATCAGTAGATAATTTCAACATTAATCATGTAGGAGATGATCTTACTTTTTACGCCCTCCTCTACCACCTTCTGTTCCCCGTCCAGATTTTGTACCACCATCCATACTAGAAGCTGGTAACCCACTTGCAGCAGCACTCCCCCTTTCTGCAAATAACCATGATATAAAAGATGGGAGTTGGATCCAAAATGAAAAAGATAAATGTATTTATGCTCCATATTCACTGGAGCATAGAGGATATCAAAGGTGGAATCGCATGCACTACCATGACGAAGCTTTTCATCAAAATTCTTCAAATACTGGTCAAGCTGTTGTAT

Coding sequence (CDS)

ATGGCGCATAGCGGCTTACTCGGAGGCGGAATACGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAATGTTCTTCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTACTCGTTATCTGTCATGGATGGCAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTATACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCTTCTCATGTGTCGTTACTTCCATCTCGATGGGAACCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACAGTAACCACCATTATTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCTGATGCTGAGAAGGATGGTGGGACAGGGCCACTTTGA

Protein sequence

MAHSGLLGGGIRWKTRKKMRENVSDERGQQNGTLNVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFSTVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
BLAST of Cp4.1LG08g03070 vs. TrEMBL
Match: A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-120
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 1

Query: 1   MAHSGLLGGGIRWKTRKKM--RENVSDERGQQNG-TLNVLLQDPFEVLGSDLLMAILGYV 60
           MA S  LGGG RWK+RKK   RE VSDERGQQN  T N LLQDPFEVLGSDLL+AIL Y+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMD 120
           D+RSVALSL VSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRV 180
           G RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LM RYFH DG QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEK 240
           WGGHE CFSTVT+ +GDG+IREHYVRINRWPRM VSRNEDWSW MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 DGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

BLAST of Cp4.1LG08g03070 vs. TrEMBL
Match: A0A061EM39_THECC (F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.8e-93
Identity = 158/239 (66.11%), Postives = 193/239 (80.75%), Query Frame = 1

Query: 8   GGGIRWKTRKKMRENVSDERGQQNGTLN--VLLQDPFEVLGSDLLMAILGYVDSRSVALS 67
           GG  R K RK+  EN  +++ Q+ G     V+ +DP EV G D+++ IL  +D+RSVALS
Sbjct: 15  GGERRLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 74

Query: 68  LLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMR 127
           LLVSR+W+G+ASSD LWSSKC ELW GKAHIPR +Q RGL K+AAYS+SVMDG RTRIM+
Sbjct: 75  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 134

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+  LM RYFH DG+QTADP D+VWGGHECC+
Sbjct: 135 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 194

Query: 188 STVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
           S VT+++G+GKIR HYVRINRWPRM VSRN+DWSWEMSN    Y+S+ DA+K GGTGPL
Sbjct: 195 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

BLAST of Cp4.1LG08g03070 vs. TrEMBL
Match: A0A067KNI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.1e-92
Identity = 159/238 (66.81%), Postives = 186/238 (78.15%), Query Frame = 1

Query: 12  RWKTRKKMRENVSDERGQQNGTL-----NVLLQDPFEVLGSDLLMAILGYVDSRSVALSL 71
           +W  R++ R+    E G +   +     + L QDP E LG D+++ IL  +D+RSVALSL
Sbjct: 52  KWMNRRRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSL 111

Query: 72  LVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMRE 131
           LVSR W+ +ASSD LWSSKC ELWLGKAHIPRL+Q RG+ K+AAYSLSVMDG RTRIMR+
Sbjct: 112 LVSRGWHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRD 171

Query: 132 DLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFS 191
           DLCDHAW+FHF K AP YWR+LDPYW+G+  LM RYFH DG+QTADP DRVWGGHECCFS
Sbjct: 172 DLCDHAWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFS 231

Query: 192 TVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
            VT+ I DG IREHYVRINRWPRM VSR +DWSWEMSNH   YSS+ DA K GGTGP+
Sbjct: 232 VVTSFIADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

BLAST of Cp4.1LG08g03070 vs. TrEMBL
Match: V4S9X3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005680mg PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.4e-91
Identity = 152/231 (65.80%), Postives = 186/231 (80.52%), Query Frame = 1

Query: 14  KTRKKMRENVSDERGQQNGTLNVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWY 73
           + R+K +E + +E          L QDP EV G D+++ IL  +D+RSVALSLLVSR+W+
Sbjct: 32  RNREKRKEKIEEEED--------LSQDPLEVFGRDIILMILKNLDARSVALSLLVSRAWH 91

Query: 74  GIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAW 133
           G+ASSDS+WS+KC ELWLGKAHIP LA  +GLPK+AAYSLS+MDG RTRI +EDLCDHAW
Sbjct: 92  GVASSDSIWSAKCEELWLGKAHIPCLALVQGLPKLAAYSLSIMDGKRTRITKEDLCDHAW 151

Query: 134 QFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFSTVTTIIG 193
           +FHFNK  P YWR+LDPYW+G+  LM RYFH DG+QTADP D+VWGGHECC+S +T+++G
Sbjct: 152 EFHFNKVVPEYWRNLDPYWKGTSPLMHRYFHTDGSQTADPGDKVWGGHECCYSIITSVVG 211

Query: 194 DGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
           +GKIREHYVRINRWP MLVSR +DWSWEMSN    YSS+ DA + GGTGPL
Sbjct: 212 EGKIREHYVRINRWPHMLVSRKQDWSWEMSNVLCCYSSVPDAHRGGGTGPL 254

BLAST of Cp4.1LG08g03070 vs. TrEMBL
Match: B9RWR4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.8e-90
Identity = 161/233 (69.10%), Postives = 181/233 (77.68%), Query Frame = 1

Query: 12  RWKTRKKMRENVSDERGQQNGTLNVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRS 71
           R + +KK  E    ER           QDP EVLG DL+M IL  +D+RSVALSLLVSRS
Sbjct: 32  RKRKKKKKSEGEDCER-----------QDPLEVLGWDLMMKILSNLDARSVALSLLVSRS 91

Query: 72  WYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDH 131
           W  +A SD LW+SKC ELWLGKAHIPRL+Q RGL K+AAYSLSVMD  RTRIMR+DLCDH
Sbjct: 92  WNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDDLCDH 151

Query: 132 AWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFSTVTTI 191
            W+FHF K AP YWR+LDPYW+G+  LM RYFH DG+Q+ADP DRVWGGHECCFS VT+ 
Sbjct: 152 VWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSVVTSF 211

Query: 192 IGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
           IGDG IREHYVRINRWPR+ VSR +DWSWEMSNH   YSSI DA K+GGTGPL
Sbjct: 212 IGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

BLAST of Cp4.1LG08g03070 vs. NCBI nr
Match: gi|449432472|ref|XP_004134023.1| (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 1

Query: 1   MAHSGLLGGGIRWKTRKKM--RENVSDERGQQNG-TLNVLLQDPFEVLGSDLLMAILGYV 60
           MA S  LGGG RWK+RKK   RE VSDERGQQN  T N LLQDPFEVLGSDLL+AIL Y+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMD 120
           D+RSVALSL VSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRV 180
           G RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LM RYFH DG QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEK 240
           WGGHE CFSTVT+ +GDG+IREHYVRINRWPRM VSRNEDWSW MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 DGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

BLAST of Cp4.1LG08g03070 vs. NCBI nr
Match: gi|659075958|ref|XP_008438422.1| (PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 9.4e-119
Identity = 207/254 (81.50%), Postives = 220/254 (86.61%), Query Frame = 1

Query: 1   MAHSGLLGGGIRWKTRKKM---------RENVSDERGQQNG-TLNVLLQDPFEVLGSDLL 60
           MA S  L GG RWKTRKK          RE VSDERGQQN  T N +LQDPFEVLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAA 120
           M IL Y+D+RSVALSLLVSRSWY +ASSD LWSSKC+ELWLGKAHIPRLAQ+RGLPK+AA
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 YSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQT 180
           YSLS+MDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LM RYFH DG+QT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHECCFSTVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYS 240
           ADPDDRVWGGHE CFSTVT+ +GDG+IREHYVRINRWPRM VSRNEDWSW MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

Query: 241 SIADAEKDGGTGPL 245
           SIAD +K GGTGPL
Sbjct: 241 SIADPDKAGGTGPL 254

BLAST of Cp4.1LG08g03070 vs. NCBI nr
Match: gi|590657285|ref|XP_007034521.1| (F-box family protein [Theobroma cacao])

HSP 1 Score: 349.7 bits (896), Expect = 4.0e-93
Identity = 158/239 (66.11%), Postives = 193/239 (80.75%), Query Frame = 1

Query: 8   GGGIRWKTRKKMRENVSDERGQQNGTLN--VLLQDPFEVLGSDLLMAILGYVDSRSVALS 67
           GG  R K RK+  EN  +++ Q+ G     V+ +DP EV G D+++ IL  +D+RSVALS
Sbjct: 15  GGERRLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 74

Query: 68  LLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMR 127
           LLVSR+W+G+ASSD LWSSKC ELW GKAHIPR +Q RGL K+AAYS+SVMDG RTRIM+
Sbjct: 75  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 134

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+  LM RYFH DG+QTADP D+VWGGHECC+
Sbjct: 135 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 194

Query: 188 STVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
           S VT+++G+GKIR HYVRINRWPRM VSRN+DWSWEMSN    Y+S+ DA+K GGTGPL
Sbjct: 195 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

BLAST of Cp4.1LG08g03070 vs. NCBI nr
Match: gi|802633773|ref|XP_012077663.1| (PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas])

HSP 1 Score: 346.3 bits (887), Expect = 4.4e-92
Identity = 159/238 (66.81%), Postives = 186/238 (78.15%), Query Frame = 1

Query: 12  RWKTRKKMRENVSDERGQQNGTL-----NVLLQDPFEVLGSDLLMAILGYVDSRSVALSL 71
           +W  R++ R+    E G +   +     + L QDP E LG D+++ IL  +D+RSVALSL
Sbjct: 52  KWMNRRRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSL 111

Query: 72  LVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMRE 131
           LVSR W+ +ASSD LWSSKC ELWLGKAHIPRL+Q RG+ K+AAYSLSVMDG RTRIMR+
Sbjct: 112 LVSRGWHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRD 171

Query: 132 DLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFS 191
           DLCDHAW+FHF K AP YWR+LDPYW+G+  LM RYFH DG+QTADP DRVWGGHECCFS
Sbjct: 172 DLCDHAWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFS 231

Query: 192 TVTTIIGDGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
            VT+ I DG IREHYVRINRWPRM VSR +DWSWEMSNH   YSS+ DA K GGTGP+
Sbjct: 232 VVTSFIADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

BLAST of Cp4.1LG08g03070 vs. NCBI nr
Match: gi|567854773|ref|XP_006420506.1| (hypothetical protein CICLE_v10005680mg [Citrus clementina])

HSP 1 Score: 342.8 bits (878), Expect = 4.9e-91
Identity = 152/231 (65.80%), Postives = 186/231 (80.52%), Query Frame = 1

Query: 14  KTRKKMRENVSDERGQQNGTLNVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWY 73
           + R+K +E + +E          L QDP EV G D+++ IL  +D+RSVALSLLVSR+W+
Sbjct: 32  RNREKRKEKIEEEED--------LSQDPLEVFGRDIILMILKNLDARSVALSLLVSRAWH 91

Query: 74  GIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAW 133
           G+ASSDS+WS+KC ELWLGKAHIP LA  +GLPK+AAYSLS+MDG RTRI +EDLCDHAW
Sbjct: 92  GVASSDSIWSAKCEELWLGKAHIPCLALVQGLPKLAAYSLSIMDGKRTRITKEDLCDHAW 151

Query: 134 QFHFNKEAPVYWRDLDPYWQGSHLLMCRYFHLDGNQTADPDDRVWGGHECCFSTVTTIIG 193
           +FHFNK  P YWR+LDPYW+G+  LM RYFH DG+QTADP D+VWGGHECC+S +T+++G
Sbjct: 152 EFHFNKVVPEYWRNLDPYWKGTSPLMHRYFHTDGSQTADPGDKVWGGHECCYSIITSVVG 211

Query: 194 DGKIREHYVRINRWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL 245
           +GKIREHYVRINRWP MLVSR +DWSWEMSN    YSS+ DA + GGTGPL
Sbjct: 212 EGKIREHYVRINRWPHMLVSRKQDWSWEMSNVLCCYSSVPDAHRGGGTGPL 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L471_CUCSA1.2e-12084.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1[more]
A0A061EM39_THECC2.8e-9366.11F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1[more]
A0A067KNI3_JATCU3.1e-9266.81Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1[more]
V4S9X3_9ROSI3.4e-9165.80Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005680mg PE=4 SV=1[more]
B9RWR4_RICCO3.8e-9069.10Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|449432472|ref|XP_004134023.1|1.7e-12084.62PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus][more]
gi|659075958|ref|XP_008438422.1|9.4e-11981.50PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo][more]
gi|590657285|ref|XP_007034521.1|4.0e-9366.11F-box family protein [Theobroma cacao][more]
gi|802633773|ref|XP_012077663.1|4.4e-9266.81PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas][more]
gi|567854773|ref|XP_006420506.1|4.9e-9165.80hypothetical protein CICLE_v10005680mg [Citrus clementina][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g03070.1Cp4.1LG08g03070.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 48..86
score: 1.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 39..93
score: 2.75
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 39..108
score: 2.3
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 16..243
score: 1.1
NoneNo IPR availablePANTHERPTHR22844:SF163SUBFAMILY NOT NAMEDcoord: 16..243
score: 1.1

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g03070Cp4.1LG03g18360Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g03070Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g03070Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g03070Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g03070Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g03070Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g03070Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g03070Cucurbita moschata (Rifu)cmocpeB508
Cp4.1LG08g03070Cucurbita moschata (Rifu)cmocpeB599
Cp4.1LG08g03070Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g03070Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g03070Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g03070Wild cucumber (PI 183967)cpecpiB858
Cp4.1LG08g03070Cucumber (Chinese Long) v2cpecuB858
Cp4.1LG08g03070Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g03070Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g03070Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g03070Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g03070Watermelon (Charleston Gray)cpewcgB792
Cp4.1LG08g03070Watermelon (97103) v1cpewmB843
Cp4.1LG08g03070Watermelon (97103) v1cpewmB853
Cp4.1LG08g03070Melon (DHL92) v3.5.1cpemeB803
Cp4.1LG08g03070Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g03070Cucumber (Gy14) v2cgybcpeB278
Cp4.1LG08g03070Cucumber (Gy14) v2cgybcpeB452
Cp4.1LG08g03070Melon (DHL92) v3.6.1cpemedB944
Cp4.1LG08g03070Silver-seed gourdcarcpeB0329
Cp4.1LG08g03070Silver-seed gourdcarcpeB1101
Cp4.1LG08g03070Silver-seed gourdcarcpeB1507
Cp4.1LG08g03070Cucumber (Chinese Long) v3cpecucB1045
Cp4.1LG08g03070Cucumber (Chinese Long) v3cpecucB1053
Cp4.1LG08g03070Wax gourdcpewgoB1100
Cp4.1LG08g03070Wax gourdcpewgoB1115
Cp4.1LG08g03070Wax gourdcpewgoB1118