CmoCh14G019080 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G019080
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box family protein
LocationCmo_Chr14 : 14206638 .. 14209727 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACTGGGTTTCTATTTTGCAACCGCCATTTCCTTAGCAATGTCGGCCAGATCACAATGCTAATCGCCGATCGCGCCATCCTCTCCAAAACCCTTTTCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGAACTTCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGGTCAGCGTCTTCACTCCGTTAATTCGTTTATGTTATGGTGCTTGTGATTAAATTCGATTCTCTGGAATTGGATTTTGGTATTTGATCTTCTGTTGGTTGTGGTAATTGTTTTCCCTGTGCAAATGGAGTCGTTCACTCGTTTTTGCAATTAGAAAATCGTTTCGTTTGTGTCGAACCGAGGTCCTTATTCTGTGGCTTTCACTTCTATTTTGTTTCACGTACTTATCTTCTCTCTCGTCGGATTTGAATCTTAAATTTATGTAGCCTGTGGTTTTTTCTGCTGAATTCAGCTTTTTCTACCTAGATTGATCATAACAAACTGCAGTTAGTGGATTTTTTGTTCGACCTCTCATGTTAATTTGAATTATTTCTCTCGGTTGTTGAAAACTCATCTTCAAATCATTTCCTCGACTCTTTCTAAGAGTGATATCCACATTTCTATGGTAAAAAGTGTTCCAAGCCTGTTAAAATTATGAGGTAGATAATCAAAATCGATGCAAGTGTTTCTGGGAGAAGTATGTCAAGAAAACAAGTGCTGTACTTACTAGAAAAGTCATTCCAAGATGCGGAAGCTTGACATCATGAAATCCTTAGTAGAAATTCTGAGGTTATCCTATCTTGGTTTCACCCTTCGATAGATACGAAATTGTATGTGCATAGTTTTGACCTATATCCGTCTCTATGTTCCTGCCCAGAAGGTGTGTGTATTTTACAACACAATGTCAAGTGCTTGTGTAGGTGTGTTCGAAAGATGCATTGTAGATTATTTTCTAAAATTCATGTCTTCTTTTAAGCTTTTAGAAAATATTTGGAATTTGAATATACGTTTTAACTTATTTGTTTAGATGCAAATATTAGATGTTATATGAACAAGGATTGAAGTTGAAGCCAAGAAATTCACATCCTTCTTTCTGGATAGCTCATTCCTGGTTATGCCAGGGGATAGTTATGACTGCCTGTCATGTGTATGTTATTAGACACTGGGATAGATGATTTAAAATTCTACAAATTTTAAAGGGTGTAGCTGCAAAAAAACTAACGTTCTTTACTGTTTACTGTAAAATTGAACATTTGGTAAGCAAGTTTATTGTATTTTCTCTTAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACGAACCCGAAGTTTTTCAAGGCTGGCTGCCTATTCGTTATCCATCATGGATGGCAAACGAGTTAAGTTTCTCTCTCCACCCCCAAGCAATAGTTTCGGGAGTATGTCGTTCCATATACTTATATATGTGTGTTACTCCATGTATAGTCGTGTGAACGCAGTTGGGATGACAAAGTGCATCTACTGAATCTCGTCATCAATAATTTAGAAAAAAGAATATGTTCTACACATGTACTCCCAAGCATGGCATAGTGAGAAGCATGTATTACTTTGATATCGTTTTTCATGGGTTTAACTTCTTGTATCAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGTATGTTGGTCTTTTATGCAGTCATCAAACATTGTTTCTGGACGCTAACCATCATGTAATGAATTAGATAATATGAAACCTGGTTAGGAGAGGAGGATATTGAAGTTCTAAATTAACTGGATGAATTCTTTTACGTTTGTGTTTTATGATTGATTAAACCTGCTTATGTTATTACATATTTTCTACACATTTGAGTACCTTTTATCTTTTCTACACCATTCCTTAGGCATCTTACGAAGATTCATGGTATCTACATCTAATTTTATCCTCGTCTTAGTTGCACACCAACTATATGGTTTCCATCACAAATATTCATAATTTATTTTAAGTGTGCCCTACTCACTGGGAGAGGTTAGATGGCTGGTGGTGGATATTTTAGCAATACAAATTTCATGGATGATCCTCACAGCTTAGATAGCCATGCTAGTGATTGTGTTAAAAAAAACATCTAACATGCACCCCAAAAAAAAAAAAAAATTCCCATACCACTTGGATTTGGAACTGTCTATGGAGCATGATAATCGTATATAATGCGTCTATTTTCAAATTTGTGTGGTGTCATGGCCGTGTCTATGTTTCTTCGTGAAATGTCTGCTGGTACTCACAATATTGATGGCCGTACTAGTGATTTAGAGGGTATATCCCAAAAGGTGTCTACTGCTTGATCCTGAATACCTTTTGAGAAGTACAATTGCATGGTTCTATTATCATGCTCGAGTGCAGGCTGGTTTTAGTCCAAGCTACCAATTTTCTGCTTAGATGCAAATGTATCTAAAGTTATAATGTGCAACCGACTGAACATCCACGTCCAAATCTTTAAGGCACCTTTCCTGATGAGGGGCAAATTGATTCATAATGTCTGGTGAGTTAATTTCTGTTCCCTTCAGGAAGCTCCCATATACTGGCGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCATGAATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCTGACAAGGATAGCGGGACGGGGCCACTCTAA

mRNA sequence

AAACTGGGTTTCTATTTTGCAACCGCCATTTCCTTAGCAATGTCGGCCAGATCACAATGCTAATCGCCGATCGCGCCATCCTCTCCAAAACCCTTTTCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGAACTTCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCATATACTGGCGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCATGAATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCTGACAAGGATAGCGGGACGGGGCCACTCTAA

Coding sequence (CDS)

ATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGAACTTCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCATATACTGGCGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCATGAATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCTGACAAGGATAGCGGGACGGGGCCACTCTAA
Homology
[Close]
BLAST of CmoCh14G019080 vs. TrEMBL
Match: A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.1e-97
Identity = 182/247 (73.68%), Postives = 195/247 (78.95%), Query Frame = 1 

Query: 1   MAQSDFLR--PPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLLMTILSYV 60
           MAQSDFL      K+RKKKKKRE+VSDE+GQQN  TRN LLQDPFEVLG DLL+ ILSY+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWNS--------------------------------- 120
           DARSVALSL VSRSWYAVASSDRLW+S                                 
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 --KTRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
             +TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADK 210
           WGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD +K
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

[Close]
BLAST of CmoCh14G019080 vs. TrEMBL
Match: A0A061EM39_THECC (F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 131/235 (55.74%), Postives = 163/235 (69.36%), Query Frame = 1 

Query: 12  KARKKKKKRESVSDEQGQQNGTRNE--LLQDPFEVLGPDLLMTILSYVDARSVALSLLVS 71
           + +K+K+  E+  ++Q Q+ G   E  + +DP EV G D+++ ILS +DARSVALSLLVS
Sbjct: 19  RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALSLLVS 78

Query: 72  RSWYAVASS--------DRLWNSK---------------------------TRIMREDLC 131
           R+W+ VASS        + LW+ K                           TRIM++DLC
Sbjct: 79  RAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMKDDLC 138

Query: 132 AHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVT 191
            H W+FHFNK AP YWRNLDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHECC+S VT
Sbjct: 139 DHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCYSVVT 198

Query: 192 SFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           S +G+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DADK  GTGPL
Sbjct: 199 SVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]
BLAST of CmoCh14G019080 vs. TrEMBL
Match: F6HS42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-68
Identity = 133/239 (55.65%), Postives = 159/239 (66.53%), Query Frame = 1 

Query: 5   DFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVAL 64
           D  + P   RKKK+KR+  ++E       ++E+LQDP EV G D++M ILSY+DA SVAL
Sbjct: 34  DVTKSPGSKRKKKRKRQDGAEEG------KSEVLQDPLEVFGSDMMMMILSYLDAPSVAL 93

Query: 65  SLLVSRSWYAVASS--------DRLWNSK---------------------------TRIM 124
           SLLVSR W+ VASS        + LW  K                           +RI 
Sbjct: 94  SLLVSRGWHGVASSDRLWSTKCEELWCGKAHIPRVSQERGLSKLAAYSFSVMDGKRSRIT 153

Query: 125 REDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECC 184
           ++DLC H W FHFN+ AP YWRNLDPYW+G+ P MRRYFHPDGSQTADP D+VWGGHECC
Sbjct: 154 KDDLCDHVWNFHFNRGAPDYWRNLDPYWKGTGPPMRRYFHPDGSQTADPGDQVWGGHECC 213

Query: 185 FSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGP 209
           +S VTSF+G G+IREHYVRINRWP+M V R  DWSW+MSNH   YSSI DADK+ GTGP
Sbjct: 214 YSIVTSFVGGGKIREHYVRINRWPQMSVFRKPDWSWEMSNHLYCYSSIPDADKEGGTGP 266

[Close]
BLAST of CmoCh14G019080 vs. TrEMBL
Match: B9RWR4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 137/237 (57.81%), Postives = 156/237 (65.82%), Query Frame = 1 

Query: 8   RPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLL 67
           R   K RK+KKK++S  ++  +Q         DP EVLG DL+M ILS +DARSVALSLL
Sbjct: 26  RDDFKERKRKKKKKSEGEDCERQ---------DPLEVLGWDLMMKILSNLDARSVALSLL 85

Query: 68  VSRSWYAVASS--------DRLWNSK---------------------------TRIMRED 127
           VSRSW  +A S        + LW  K                           TRIMR+D
Sbjct: 86  VSRSWNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDD 145

Query: 128 LCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFST 187
           LC H W+FHF K AP YWRNLDPYW+G+ PLM RYFH DGSQ+ADP DRVWGGHECCFS 
Sbjct: 146 LCDHVWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSV 205

Query: 188 VTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           VTSFIGDG IREHYVRINRWPR+ VSR +DWSW+MSNH   YSSI DA K+ GTGPL
Sbjct: 206 VTSFIGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

[Close]
BLAST of CmoCh14G019080 vs. TrEMBL
Match: A0A067KNI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.5e-66
Identity = 131/233 (56.22%), Postives = 154/233 (66.09%), Query Frame = 1 

Query: 12  KARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRS 71
           + R+K+KK E+ ++    +    + L QDP E LG D+++ ILS +DARSVALSLLVSR 
Sbjct: 57  RRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSLLVSRG 116

Query: 72  WYAVAS--------SDRLWNSK---------------------------TRIMREDLCAH 131
           W+ +AS         + LW  K                           TRIMR+DLC H
Sbjct: 117 WHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRDDLCDH 176

Query: 132 AWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSF 191
           AW+FHF K AP YWRNLDPYW+G+ PLM RYFH DGSQTADP DRVWGGHECCFS VTSF
Sbjct: 177 AWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFSVVTSF 236

Query: 192 IGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           I DG IREHYVRINRWPRM VSR +DWSW+MSNH   YSS+ DA K  GTGP+
Sbjct: 237 IADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

[Close]
BLAST of CmoCh14G019080 vs. NCBI nr
Match: gi|449432476|ref|XP_004134025.1| (PREDICTED: uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.8e-102
Identity = 183/212 (86.32%), Postives = 195/212 (91.98%), Query Frame = 1 

Query: 1   MAQSDFLR--PPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLLMTILSYV 60
           MAQSDFL      K+RKKKKKRE+VSDE+GQQN  TRN LLQDPFEVLG DLL+ ILSY+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQFHFNKEAPIYWRNLDPYW 120
           DARSVALSL VSRSWYAVASSDRLW+SKTRIMREDLC HAWQFHFNKEAP+YWR+LDPYW
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYW 120

Query: 121 QGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFV 180
           QGSHPLMRRYFHPDG+QTADPDDRVWGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFV
Sbjct: 121 QGSHPLMRRYFHPDGTQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFV 180

Query: 181 SRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           SRNEDWSW+MSNHFTSYSSIAD +K  GTGPL
Sbjct: 181 SRNEDWSWRMSNHFTSYSSIADPEKTGGTGPL 212

[Close]
BLAST of CmoCh14G019080 vs. NCBI nr
Match: gi|659075960|ref|XP_008438424.1| (PREDICTED: uncharacterized protein LOC103483521 isoform X2 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 4.0e-102
Identity = 184/219 (84.02%), Postives = 195/219 (89.04%), Query Frame = 1 

Query: 1   MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLL 60
           MAQSDFL         +   K +KKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQFHFNKEAPIYW 120
           M ILSY+DARSVALSLLVSRSWYAVASSDRLW+SKTRIMREDLC HAWQFHFNKEAP+YW
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKTRIMREDLCDHAWQFHFNKEAPVYW 120

Query: 121 RNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRIN 180
           R+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTSF+GDGEIREHYVRIN
Sbjct: 121 RDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRIN 180

Query: 181 RWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           RWPRMFVSRNEDWSW+MSNHFTSYSSIAD DK  GTGPL
Sbjct: 181 RWPRMFVSRNEDWSWRMSNHFTSYSSIADPDKAGGTGPL 219

[Close]
BLAST of CmoCh14G019080 vs. NCBI nr
Match: gi|449432472|ref|XP_004134023.1| (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 8.7e-97
Identity = 182/247 (73.68%), Postives = 195/247 (78.95%), Query Frame = 1 

Query: 1   MAQSDFLR--PPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLLMTILSYV 60
           MAQSDFL      K+RKKKKKRE+VSDE+GQQN  TRN LLQDPFEVLG DLL+ ILSY+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWNS--------------------------------- 120
           DARSVALSL VSRSWYAVASSDRLW+S                                 
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 --KTRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
             +TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADK 210
           WGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD +K
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

[Close]
BLAST of CmoCh14G019080 vs. NCBI nr
Match: gi|659075958|ref|XP_008438422.1| (PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 2.1e-90
Identity = 175/254 (68.90%), Postives = 187/254 (73.62%), Query Frame = 1 

Query: 1   MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLL 60
           MAQSDFL         +   K +KKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MTILSYVDARSVALSLLVSRSWY-----------------------------------AV 120
           M ILSY+DARSVALSLLVSRSWY                                   A 
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 ASSDRLWNSKTRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQT 180
            S   +   +TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYS 210
           ADPDDRVWGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]
BLAST of CmoCh14G019080 vs. NCBI nr
Match: gi|590657285|ref|XP_007034521.1| (F-box family protein [Theobroma cacao])

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-69
Identity = 131/235 (55.74%), Postives = 163/235 (69.36%), Query Frame = 1 

Query: 12  KARKKKKKRESVSDEQGQQNGTRNE--LLQDPFEVLGPDLLMTILSYVDARSVALSLLVS 71
           + +K+K+  E+  ++Q Q+ G   E  + +DP EV G D+++ ILS +DARSVALSLLVS
Sbjct: 19  RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALSLLVS 78

Query: 72  RSWYAVASS--------DRLWNSK---------------------------TRIMREDLC 131
           R+W+ VASS        + LW+ K                           TRIM++DLC
Sbjct: 79  RAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMKDDLC 138

Query: 132 AHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVT 191
            H W+FHFNK AP YWRNLDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHECC+S VT
Sbjct: 139 DHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCYSVVT 198

Query: 192 SFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL 210
           S +G+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DADK  GTGPL
Sbjct: 199 SVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

The following BLAST results are available for this feature:
BLAST of CmoCh14G019080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L471_CUCSA6.1e-9773.68Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1[more]
A0A061EM39_THECC1.4e-6955.74F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1[more]
F6HS42_VITVI2.7e-6855.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=... [more]
B9RWR4_RICCO3.8e-6757.81Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1[more]
A0A067KNI3_JATCU5.5e-6656.22Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1[more]
BLAST of CmoCh14G019080 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432476|ref|XP_004134025.1|1.8e-10286.32PREDICTED: uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus][more]
gi|659075960|ref|XP_008438424.1|4.0e-10284.02PREDICTED: uncharacterized protein LOC103483521 isoform X2 [Cucumis melo][more]
gi|449432472|ref|XP_004134023.1|8.7e-9773.68PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus][more]
gi|659075958|ref|XP_008438422.1|2.1e-9068.90PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo][more]
gi|590657285|ref|XP_007034521.1|2.0e-6955.74F-box family protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G019080.1CmoCh14G019080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 47..84
score: 2.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 39..119
score: 7.06E-13coord: 171..187
score: 7.06
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 39..84
score: 8.4
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 14..208
score: 2.1
NoneNo IPR availablePANTHERPTHR22844:SF163SUBFAMILY NOT NAMEDcoord: 14..208
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G019080Cucsa.256040Cucumber (Gy14) v1cgycmoB0700
CmoCh14G019080CmaCh14G018640Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G019080CmaCh06G012760Cucurbita maxima (Rimu)cmacmoB797
CmoCh14G019080Cla021460Watermelon (97103) v1cmowmB231
CmoCh14G019080Csa3G133360Cucumber (Chinese Long) v2cmocuB239
CmoCh14G019080MELO3C006351Melon (DHL92) v3.5.1cmomeB230
CmoCh14G019080ClCG05G003720Watermelon (Charleston Gray)cmowcgB219
CmoCh14G019080CSPI03G11330Wild cucumber (PI 183967)cmocpiB243
CmoCh14G019080Lsi05G017950Bottle gourd (USVL1VR-Ls)cmolsiB233
CmoCh14G019080Cp4.1LG03g18360Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G019080Cp4.1LG08g03070Cucurbita pepo (Zucchini)cmocpeB254
CmoCh14G019080CsaV3_3G011440Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G019080Cla97C05G084390Watermelon (97103) v2cmowmbB243
CmoCh14G019080CsGy3G011360Cucumber (Gy14) v2cgybcmoB290
CmoCh14G019080Carg06262Silver-seed gourdcarcmoB1284
CmoCh14G019080Carg16519Silver-seed gourdcarcmoB0328
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G019080Melon (DHL92) v3.5.1cmomeB221
CmoCh14G019080Watermelon (Charleston Gray)cmowcgB221
CmoCh14G019080Watermelon (Charleston Gray)cmowcgB227
CmoCh14G019080Watermelon (97103) v1cmowmB239
CmoCh14G019080Cucurbita pepo (Zucchini)cmocpeB223
CmoCh14G019080Cucurbita pepo (Zucchini)cmocpeB230
CmoCh14G019080Cucurbita pepo (Zucchini)cmocpeB252
CmoCh14G019080Bottle gourd (USVL1VR-Ls)cmolsiB213
CmoCh14G019080Bottle gourd (USVL1VR-Ls)cmolsiB235
CmoCh14G019080Cucumber (Gy14) v2cgybcmoB181
CmoCh14G019080Cucumber (Gy14) v2cgybcmoB288
CmoCh14G019080Melon (DHL92) v3.6.1cmomedB250
CmoCh14G019080Melon (DHL92) v3.6.1cmomedB260
CmoCh14G019080Silver-seed gourdcarcmoB0319
CmoCh14G019080Silver-seed gourdcarcmoB1049
CmoCh14G019080Silver-seed gourdcarcmoB1443
CmoCh14G019080Cucumber (Chinese Long) v3cmocucB0267
CmoCh14G019080Cucumber (Chinese Long) v3cmocucB0279
CmoCh14G019080Watermelon (97103) v2cmowmbB246
CmoCh14G019080Watermelon (97103) v2cmowmbB253
CmoCh14G019080Wax gourdcmowgoB0299
CmoCh14G019080Wax gourdcmowgoB0331
CmoCh14G019080Wax gourdcmowgoB0333
CmoCh14G019080Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G019080Cucurbita moschata (Rifu)cmocmoB213
CmoCh14G019080Cucurbita moschata (Rifu)cmocmoB224
CmoCh14G019080Cucurbita moschata (Rifu)cmocmoB233
CmoCh14G019080Cucumber (Gy14) v1cgycmoB0390
CmoCh14G019080Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G019080Cucurbita maxima (Rimu)cmacmoB883
CmoCh14G019080Wild cucumber (PI 183967)cmocpiB228
CmoCh14G019080Wild cucumber (PI 183967)cmocpiB239
CmoCh14G019080Cucumber (Chinese Long) v2cmocuB225
CmoCh14G019080Cucumber (Chinese Long) v2cmocuB236